RNA–Protein interactions for RNA: ENST00000606213.5

PTPRN-219, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-219ENST00000606213 THRAP3Q9Y2W1 955 aaKnown RBP32.62■■■□□ 2.81
PTPRN-219ENST00000606213 CRB1P82279 1406 aa32.61■■■□□ 2.81
PTPRN-219ENST00000606213 COG3Q96JB2 828 aa32.61■■■□□ 2.81
PTPRN-219ENST00000606213 AXIN2Q9Y2T1 843 aa32.61■■■□□ 2.81
PTPRN-219ENST00000606213 POLR3GLQ9BT43 218 aa32.6■■■□□ 2.81
PTPRN-219ENST00000606213 NFAT5O94916 1531 aa32.59■■■□□ 2.81
PTPRN-219ENST00000606213 BLMP54132 1417 aaPredicted RBP32.59■■■□□ 2.81
PTPRN-219ENST00000606213 PDE3BQ13370 1112 aa32.58■■■□□ 2.81
PTPRN-219ENST00000606213 EP400Q96L91 3159 aa32.58■■■□□ 2.81
PTPRN-219ENST00000606213 WDR17Q8IZU2 1322 aa32.57■■■□□ 2.8
PTPRN-219ENST00000606213 THSD7AQ9UPZ6 1657 aa32.57■■■□□ 2.8
PTPRN-219ENST00000606213 HSPA5P11021 654 aaKnown RBP32.56■■■□□ 2.8
PTPRN-219ENST00000606213 FAM182BQ5T319 152 aa32.55■■■□□ 2.8
PTPRN-219ENST00000606213 OVOS2A0A0J9YW53 1432 aa32.54■■■□□ 2.8
PTPRN-219ENST00000606213 OVOS2Q6IE36 1432 aa32.54■■■□□ 2.8
PTPRN-219ENST00000606213 USP54Q70EL1 1684 aa32.54■■■□□ 2.8
PTPRN-219ENST00000606213 COL18A1P39060 1754 aa32.53■■■□□ 2.8
PTPRN-219ENST00000606213 ABCC6O95255 1503 aa32.5■■■□□ 2.79
PTPRN-219ENST00000606213 FAM196AQ6ZSG2 479 aa32.49■■■□□ 2.79
PTPRN-219ENST00000606213 GGNBP2Q9H3C7 697 aa32.48■■■□□ 2.79
PTPRN-219ENST00000606213 CARD10Q9BWT7 1032 aa32.47■■■□□ 2.79
PTPRN-219ENST00000606213 FYB1O15117 783 aa32.46■■■□□ 2.79
PTPRN-219ENST00000606213 CDCA7Q9BWT1 371 aaPredicted RBP32.46■■■□□ 2.79
PTPRN-219ENST00000606213 NLRP2Q9NX02 1062 aa32.45■■■□□ 2.79
PTPRN-219ENST00000606213 RGPD5Q99666 1765 aa32.45■■■□□ 2.78
PTPRN-219ENST00000606213 BAG6P46379 1132 aa32.44■■■□□ 2.78
PTPRN-219ENST00000606213 DDB1Q16531 1140 aa32.44■■■□□ 2.78
PTPRN-219ENST00000606213 DEFB132Q7Z7B7 95 aa32.44■■■□□ 2.78
PTPRN-219ENST00000606213 LTN1O94822 1766 aa32.44■■■□□ 2.78
PTPRN-219ENST00000606213 AMPHP49418 695 aa32.43■■■□□ 2.78
PTPRN-219ENST00000606213 ANKRD24Q8TF21 1146 aa32.42■■■□□ 2.78
PTPRN-219ENST00000606213 ERBB3P21860 1342 aa32.42■■■□□ 2.78
PTPRN-219ENST00000606213 CCDC7Q96M83 1385 aa32.42■■■□□ 2.78
PTPRN-219ENST00000606213 NSD3Q9BZ95 1437 aa32.42■■■□□ 2.78
PTPRN-219ENST00000606213 IP6K1Q92551 441 aa32.41■■■□□ 2.78
PTPRN-219ENST00000606213 MYOM1P52179 1685 aa32.4■■■□□ 2.78
PTPRN-219ENST00000606213 CARD14Q9BXL6 1004 aa32.4■■■□□ 2.78
PTPRN-219ENST00000606213 MAP3K19Q56UN5 1328 aa32.39■■■□□ 2.78
PTPRN-219ENST00000606213 TRIM37O94972 964 aa32.38■■■□□ 2.77
PTPRN-219ENST00000606213 LTV1Q96GA3 475 aaPredicted RBP32.38■■■□□ 2.77
PTPRN-219ENST00000606213 PARP4Q9UKK3 1724 aaKnown RBP32.37■■■□□ 2.77
PTPRN-219ENST00000606213 C11orf95C9JLR9 678 aaPredicted RBP32.37■■■□□ 2.77
PTPRN-219ENST00000606213 FBLN1P23142 703 aa32.37■■■□□ 2.77
PTPRN-219ENST00000606213 CGNL1Q0VF96 1302 aa32.36■■■□□ 2.77
PTPRN-219ENST00000606213 EXOC5O00471 708 aa32.34■■■□□ 2.77
PTPRN-219ENST00000606213 RRS1Q15050 365 aaKnown RBP32.34■■■□□ 2.77
PTPRN-219ENST00000606213 RGPD1P0DJD0 1748 aa32.34■■■□□ 2.77
PTPRN-219ENST00000606213 HOXC9P31274 260 aa32.33■■■□□ 2.77
PTPRN-219ENST00000606213 KIF20BQ96Q89 1820 aa32.33■■■□□ 2.77
PTPRN-219ENST00000606213 OVOS2A0A0G2JMS6 1433 aa32.31■■■□□ 2.76
PTPRN-219ENST00000606213 EN1Q05925 392 aaPredicted RBP32.3■■■□□ 2.76
PTPRN-219ENST00000606213 LRRC37A3O60309 1634 aa32.29■■■□□ 2.76
PTPRN-219ENST00000606213 APBA3O96018 575 aa32.29■■■□□ 2.76
PTPRN-219ENST00000606213 IL2RBP14784 551 aa32.29■■■□□ 2.76
PTPRN-219ENST00000606213 RTL1A6NKG5 1358 aa32.29■■■□□ 2.76
PTPRN-219ENST00000606213 DISP2A7MBM2 1401 aa32.27■■■□□ 2.76
PTPRN-219ENST00000606213 PANK3Q9H999 370 aa32.27■■■□□ 2.76
PTPRN-219ENST00000606213 WNK3Q9BYP7 1800 aa32.26■■■□□ 2.76
PTPRN-219ENST00000606213 SMG6Q86US8 1419 aaKnown RBP32.25■■■□□ 2.75
PTPRN-219ENST00000606213 MARCH10Q8NA82 808 aaPredicted RBP32.24■■■□□ 2.75
PTPRN-219ENST00000606213 PPM1GO15355 546 aaPredicted RBP32.22■■■□□ 2.75
PTPRN-219ENST00000606213 SRCAPQ6ZRS2 3230 aa32.21■■■□□ 2.75
PTPRN-219ENST00000606213 FLT4P35916 1363 aa32.2■■■□□ 2.75
PTPRN-219ENST00000606213 TNS1Q9HBL0 1735 aaKnown RBP32.2■■■□□ 2.75
PTPRN-219ENST00000606213 TNS2Q63HR2 1409 aa32.2■■■□□ 2.75
PTPRN-219ENST00000606213 FAM208AQ9UK61 1670 aaKnown RBP32.2■■■□□ 2.74
PTPRN-219ENST00000606213 EZH2Q15910 746 aaKnown RBP32.19■■■□□ 2.74
PTPRN-219ENST00000606213 KIF24Q5T7B8 1368 aa32.19■■■□□ 2.74
PTPRN-219ENST00000606213 HSP90AB2PQ58FF8 381 aa32.17■■■□□ 2.74
PTPRN-219ENST00000606213 KNSTRNQ9Y448 316 aa32.17■■■□□ 2.74
PTPRN-219ENST00000606213 EMILIN1Q9Y6C2 1016 aa32.17■■■□□ 2.74
PTPRN-219ENST00000606213 TNNT2P45379 298 aaPredicted RBP32.16■■■□□ 2.74
PTPRN-219ENST00000606213 KIF7Q2M1P5 1343 aa32.16■■■□□ 2.74
PTPRN-219ENST00000606213 INSRP06213 1382 aa32.16■■■□□ 2.74
PTPRN-219ENST00000606213 CAMKK2Q96RR4 588 aa32.15■■■□□ 2.74
PTPRN-219ENST00000606213 PARD3Q8TEW0 1356 aa32.15■■■□□ 2.74
PTPRN-219ENST00000606213 PEAK1Q9H792 1746 aa32.14■■■□□ 2.74
PTPRN-219ENST00000606213 BCL11BQ9C0K0 894 aaPredicted RBP32.14■■■□□ 2.74
PTPRN-219ENST00000606213 NBPF6Q5VWK0 638 aa32.12■■■□□ 2.73
PTPRN-219ENST00000606213 NBPF4Q96M43 638 aa32.12■■■□□ 2.73
PTPRN-219ENST00000606213 BCL9O00512 1426 aa32.11■■■□□ 2.73
PTPRN-219ENST00000606213 NSD2O96028 1365 aa32.11■■■□□ 2.73
PTPRN-219ENST00000606213 DDX54Q8TDD1 881 aaKnown RBP32.11■■■□□ 2.73
PTPRN-219ENST00000606213 USHBP1Q8N6Y0 703 aa32.1■■■□□ 2.73
PTPRN-219ENST00000606213 RAPGEF4Q8WZA2 1011 aa32.1■■■□□ 2.73
PTPRN-219ENST00000606213 MORC1Q86VD1 984 aa32.08■■■□□ 2.73
PTPRN-219ENST00000606213 PSDA5PKW4 1024 aaPredicted RBP32.06■■■□□ 2.72
PTPRN-219ENST00000606213 ACSBG1Q96GR2 724 aa32.06■■■□□ 2.72
PTPRN-219ENST00000606213 POLKQ9UBT6 870 aa32.06■■■□□ 2.72
PTPRN-219ENST00000606213 WASHC2AQ641Q2 1341 aa32.05■■■□□ 2.72
PTPRN-219ENST00000606213 NBPF14Q5TI25 921 aa32.05■■■□□ 2.72
PTPRN-219ENST00000606213 ZCRB1Q8TBF4 217 aaKnown RBP32.05■■■□□ 2.72
PTPRN-219ENST00000606213 ANKRD26Q9UPS8 1709 aa32.04■■■□□ 2.72
PTPRN-219ENST00000606213 TATP17735 454 aaPredicted RBP32.04■■■□□ 2.72
PTPRN-219ENST00000606213 SBF2Q86WG5 1849 aa32.04■■■□□ 2.72
PTPRN-219ENST00000606213 RGPD2P0DJD1 1756 aa32.04■■■□□ 2.72
PTPRN-219ENST00000606213 PLSCR1O15162 318 aa32.03■■■□□ 2.72
PTPRN-219ENST00000606213 PTF1AQ7RTS3 328 aa32.03■■■□□ 2.72
PTPRN-219ENST00000606213 R3HDM1Q15032 1099 aaKnown RBP32.02■■■□□ 2.72
PTPRN-219ENST00000606213 MAP2P11137 1827 aaKnown RBP32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms