RNA–Protein interactions for RNA: ENST00000605467.1

PBX1-220, Transcript of PBX homeobox 1, humanhuman

Gene PBX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-220ENST00000605467 PCDH10Q9P2E7 1040 aa9.02□□□□□ -0.97
PBX1-220ENST00000605467 MAGEB6P1A0A0J9YX57 407 aa9.01□□□□□ -0.97
PBX1-220ENST00000605467 NCOA4Q13772 614 aa9.01□□□□□ -0.97
PBX1-220ENST00000605467 AEBP1Q8IUX7 1158 aa9.01□□□□□ -0.97
PBX1-220ENST00000605467 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
PBX1-220ENST00000605467 DEPDC4Q8N2C3 294 aa9.01□□□□□ -0.97
PBX1-220ENST00000605467 ANKLE1Q8NAG6 615 aa9.01□□□□□ -0.97
PBX1-220ENST00000605467 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
PBX1-220ENST00000605467 MKRN1Q9UHC7 482 aaKnown RBP9.01□□□□□ -0.97
PBX1-220ENST00000605467 CARNS1A5YM72 827 aa9□□□□□ -0.97
PBX1-220ENST00000605467 FAM196BA6NMK8 535 aa9□□□□□ -0.97
PBX1-220ENST00000605467 GIGYF1O75420 1035 aaPredicted RBP9□□□□□ -0.97
PBX1-220ENST00000605467 BRD1O95696 1058 aa9□□□□□ -0.97
PBX1-220ENST00000605467 AGERQ15109 404 aa9□□□□□ -0.97
PBX1-220ENST00000605467 PLA2G2CQ5R387 149 aa9□□□□□ -0.97
PBX1-220ENST00000605467 TRMT44Q8IYL2 757 aaKnown RBP9□□□□□ -0.97
PBX1-220ENST00000605467 CARD14Q9BXL6 1004 aa9□□□□□ -0.97
PBX1-220ENST00000605467 ESPNB1AK53 854 aa8.99□□□□□ -0.97
PBX1-220ENST00000605467 CCDC85AQ96PX6 553 aaPredicted RBP8.99□□□□□ -0.97
PBX1-220ENST00000605467 ZMIZ1Q9ULJ6 1067 aa8.99□□□□□ -0.97
PBX1-220ENST00000605467 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
PBX1-220ENST00000605467 ZBTB24O43167 697 aaPredicted RBP8.98□□□□□ -0.97
PBX1-220ENST00000605467 PTK7Q13308 1070 aa8.98□□□□□ -0.97
PBX1-220ENST00000605467 CRTC2Q53ET0 693 aaPredicted RBP8.98□□□□□ -0.97
PBX1-220ENST00000605467 GGCXP38435 758 aa8.97□□□□□ -0.97
PBX1-220ENST00000605467 TRIM32Q13049 653 aa8.97□□□□□ -0.97
PBX1-220ENST00000605467 EML3Q32P44 896 aa8.97□□□□□ -0.97
PBX1-220ENST00000605467 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
PBX1-220ENST00000605467 CDV3Q9UKY7 258 aaKnown RBP8.97□□□□□ -0.97
PBX1-220ENST00000605467 USP17L15C9J2P7 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L10C9JJH3 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L13C9JLJ4 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L12C9JPN9 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L11C9JVI0 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L21D6R901 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L18D6R9N7 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L22D6RA61 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L17D6RBQ6 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L19D6RCP7 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L20D6RJB6 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 RPIAP49247 311 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 WNT7BP56706 349 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 SKOR1P84550 965 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 USP17L24Q0WX57 530 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 TMEM164Q5U3C3 297 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 PPP1R18Q6NYC8 613 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 CCDC125Q86Z20 511 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 SEPT12Q8IYM1 358 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 SLC10A4Q96EP9 437 aa8.96□□□□□ -0.98
PBX1-220ENST00000605467 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.96□□□□□ -0.98
PBX1-220ENST00000605467 NOVA2Q9UNW9 492 aaKnown RBP8.96□□□□□ -0.98
PBX1-220ENST00000605467 RASA1P20936 1047 aa8.95□□□□□ -0.98
PBX1-220ENST00000605467 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
PBX1-220ENST00000605467 KCNA1Q09470 495 aa8.95□□□□□ -0.98
PBX1-220ENST00000605467 NBPF20Q3BBV1 942 aa8.95□□□□□ -0.98
PBX1-220ENST00000605467 LARP1Q6PKG0 1096 aaKnown RBP8.95□□□□□ -0.98
PBX1-220ENST00000605467 STK32AQ8WU08 396 aa8.95□□□□□ -0.98
PBX1-220ENST00000605467 PATL2C9JE40 543 aaKnown RBP8.94□□□□□ -0.98
PBX1-220ENST00000605467 ZBTB7BO15156 539 aaPredicted RBP8.94□□□□□ -0.98
PBX1-220ENST00000605467 DKK1O94907 266 aa8.94□□□□□ -0.98
PBX1-220ENST00000605467 CLDN10P78369 228 aa8.94□□□□□ -0.98
PBX1-220ENST00000605467 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
PBX1-220ENST00000605467 DOLKQ9UPQ8 538 aa8.94□□□□□ -0.98
PBX1-220ENST00000605467 FAM69CQ0P6D2 419 aa8.93□□□□□ -0.98
PBX1-220ENST00000605467 TRIM50Q86XT4 487 aa8.93□□□□□ -0.98
PBX1-220ENST00000605467 CDCA7Q9BWT1 371 aaPredicted RBP8.93□□□□□ -0.98
PBX1-220ENST00000605467 NOD1Q9Y239 953 aa8.93□□□□□ -0.98
PBX1-220ENST00000605467 MAP4K5Q9Y4K4 846 aa8.93□□□□□ -0.98
PBX1-220ENST00000605467 ANKMY2Q8IV38 441 aa8.92□□□□□ -0.98
PBX1-220ENST00000605467 LARGE2Q8N3Y3 721 aa8.92□□□□□ -0.98
PBX1-220ENST00000605467 ATP1A2P50993 1020 aa8.91□□□□□ -0.98
PBX1-220ENST00000605467 FAM200AQ8TCP9 573 aa8.91□□□□□ -0.98
PBX1-220ENST00000605467 KCTD15Q96SI1 283 aaPredicted RBP8.91□□□□□ -0.98
PBX1-220ENST00000605467 CD2BP2O95400 341 aaKnown RBP8.9□□□□□ -0.98
PBX1-220ENST00000605467 USP4Q13107 963 aa8.9□□□□□ -0.98
PBX1-220ENST00000605467 OXLD1Q5BKU9 147 aa8.9□□□□□ -0.98
PBX1-220ENST00000605467 IFFO2Q5TF58 517 aa8.9□□□□□ -0.98
PBX1-220ENST00000605467 SIX5Q8N196 739 aa8.9□□□□□ -0.98
PBX1-220ENST00000605467 MPNDQ8N594 471 aa8.9□□□□□ -0.98
PBX1-220ENST00000605467 EMID1Q96A84 441 aaPredicted RBP8.9□□□□□ -0.98
PBX1-220ENST00000605467 CDK15Q96Q40 435 aa8.9□□□□□ -0.98
PBX1-220ENST00000605467 DNAAF2Q9NVR5 837 aaKnown RBP8.9□□□□□ -0.98
PBX1-220ENST00000605467 SLAIN2Q9P270 581 aa8.9□□□□□ -0.98
PBX1-220ENST00000605467 PCDHGA11Q9Y5H2 935 aa8.9□□□□□ -0.98
PBX1-220ENST00000605467 DPYDQ12882 1025 aa8.89□□□□□ -0.99
PBX1-220ENST00000605467 PHLDB3Q6NSJ2 640 aa8.89□□□□□ -0.99
PBX1-220ENST00000605467 LIAT1Q6ZQX7 453 aa8.89□□□□□ -0.99
PBX1-220ENST00000605467 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
PBX1-220ENST00000605467 SIRT1Q96EB6 747 aa8.89□□□□□ -0.99
PBX1-220ENST00000605467 GZF1Q9H116 711 aaPredicted RBP8.89□□□□□ -0.99
PBX1-220ENST00000605467 KIAA1024Q9UPX6 916 aa8.89□□□□□ -0.99
PBX1-220ENST00000605467 SSFA2P28290 1259 aa8.88□□□□□ -0.99
PBX1-220ENST00000605467 GTF2IP78347 998 aa8.88□□□□□ -0.99
PBX1-220ENST00000605467 INTS6LQ5JSJ4 861 aaKnown RBP8.88□□□□□ -0.99
PBX1-220ENST00000605467 RC3H1Q5TC82 1133 aaKnown RBP8.88□□□□□ -0.99
PBX1-220ENST00000605467 PCDHB11Q9Y5F2 797 aa8.88□□□□□ -0.99
PBX1-220ENST00000605467 SIAH2O43255 324 aa8.87□□□□□ -0.99
PBX1-220ENST00000605467 GRM5P41594 1212 aa8.87□□□□□ -0.99
PBX1-220ENST00000605467 SWI5Q1ZZU3 235 aa8.87□□□□□ -0.99
PBX1-220ENST00000605467 VASH1Q7L8A9 365 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms