RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ANKRD36BQ8N2N9 1353 aa15□□□□□ -0.01
TUBE1-210ENST00000604967 A0A0G2JS52 829 aa15□□□□□ -0.01
TUBE1-210ENST00000604967 TMF1P82094 1093 aa15□□□□□ -0.01
TUBE1-210ENST00000604967 MYT1Q01538 1121 aa15□□□□□ -0.01
TUBE1-210ENST00000604967 BLMP54132 1417 aaPredicted RBP15□□□□□ -0.01
TUBE1-210ENST00000604967 CRB1P82279 1406 aa15□□□□□ -0.01
TUBE1-210ENST00000604967 NINLQ9Y2I6 1382 aa14.99□□□□□ -0.01
TUBE1-210ENST00000604967 C11orf95C9JLR9 678 aaPredicted RBP14.99□□□□□ -0.01
TUBE1-210ENST00000604967 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
TUBE1-210ENST00000604967 TCP11L2Q8N4U5 519 aa14.99□□□□□ -0.01
TUBE1-210ENST00000604967 KCNH5Q8NCM2 988 aa14.98□□□□□ -0.01
TUBE1-210ENST00000604967 WDR17Q8IZU2 1322 aa14.97□□□□□ -0.01
TUBE1-210ENST00000604967 FYB1O15117 783 aa14.97□□□□□ -0.01
TUBE1-210ENST00000604967 LTN1O94822 1766 aa14.97□□□□□ -0.01
TUBE1-210ENST00000604967 DISP2A7MBM2 1401 aa14.97□□□□□ -0.01
TUBE1-210ENST00000604967 LRRC37A3O60309 1634 aa14.96□□□□□ -0.01
TUBE1-210ENST00000604967 SRCAPQ6ZRS2 3230 aa14.96□□□□□ -0.01
TUBE1-210ENST00000604967 PARP4Q9UKK3 1724 aaKnown RBP14.96□□□□□ -0.01
TUBE1-210ENST00000604967 PEAK1Q9H792 1746 aa14.95□□□□□ -0.02
TUBE1-210ENST00000604967 TNS1Q9HBL0 1735 aaKnown RBP14.95□□□□□ -0.02
TUBE1-210ENST00000604967 GGNBP2Q9H3C7 697 aa14.95□□□□□ -0.02
TUBE1-210ENST00000604967 ABCC6O95255 1503 aa14.95□□□□□ -0.02
TUBE1-210ENST00000604967 WNK3Q9BYP7 1800 aa14.94□□□□□ -0.02
TUBE1-210ENST00000604967 TOM1L2Q6ZVM7 507 aa14.94□□□□□ -0.02
TUBE1-210ENST00000604967 PTF1AQ7RTS3 328 aa14.94□□□□□ -0.02
TUBE1-210ENST00000604967 CCDC125Q86Z20 511 aa14.94□□□□□ -0.02
TUBE1-210ENST00000604967 THRAP3Q9Y2W1 955 aaKnown RBP14.94□□□□□ -0.02
TUBE1-210ENST00000604967 ERBB3P21860 1342 aa14.93□□□□□ -0.02
TUBE1-210ENST00000604967 MAP3K19Q56UN5 1328 aa14.93□□□□□ -0.02
TUBE1-210ENST00000604967 SLC24A1O60721 1099 aa14.93□□□□□ -0.02
TUBE1-210ENST00000604967 CARD10Q9BWT7 1032 aa14.93□□□□□ -0.02
TUBE1-210ENST00000604967 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
TUBE1-210ENST00000604967 TRIM37O94972 964 aa14.91□□□□□ -0.02
TUBE1-210ENST00000604967 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
TUBE1-210ENST00000604967 RRS1Q15050 365 aaKnown RBP14.91□□□□□ -0.02
TUBE1-210ENST00000604967 MARCH10Q8NA82 808 aaPredicted RBP14.91□□□□□ -0.02
TUBE1-210ENST00000604967 ANKRD24Q8TF21 1146 aa14.91□□□□□ -0.02
TUBE1-210ENST00000604967 EN1Q05925 392 aaPredicted RBP14.9□□□□□ -0.02
TUBE1-210ENST00000604967 IP6K1Q92551 441 aa14.9□□□□□ -0.02
TUBE1-210ENST00000604967 COG3Q96JB2 828 aa14.9□□□□□ -0.02
TUBE1-210ENST00000604967 KIF20BQ96Q89 1820 aa14.89□□□□□ -0.03
TUBE1-210ENST00000604967 RGPD1P0DJD0 1748 aa14.89□□□□□ -0.03
TUBE1-210ENST00000604967 CSB-PGBD3P0DP91 1061 aa14.88□□□□□ -0.03
TUBE1-210ENST00000604967 HOXC9P31274 260 aa14.88□□□□□ -0.03
TUBE1-210ENST00000604967 PDE3BQ13370 1112 aa14.88□□□□□ -0.03
TUBE1-210ENST00000604967 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
TUBE1-210ENST00000604967 FAM196AQ6ZSG2 479 aa14.88□□□□□ -0.03
TUBE1-210ENST00000604967 FAM208AQ9UK61 1670 aaKnown RBP14.87□□□□□ -0.03
TUBE1-210ENST00000604967 CAMKK2Q96RR4 588 aa14.87□□□□□ -0.03
TUBE1-210ENST00000604967 RGPD2P0DJD1 1756 aa14.87□□□□□ -0.03
TUBE1-210ENST00000604967 EZH2Q15910 746 aaKnown RBP14.86□□□□□ -0.03
TUBE1-210ENST00000604967 DDB1Q16531 1140 aa14.86□□□□□ -0.03
TUBE1-210ENST00000604967 LTV1Q96GA3 475 aaPredicted RBP14.86□□□□□ -0.03
TUBE1-210ENST00000604967 POLR3GLQ9BT43 218 aa14.86□□□□□ -0.03
TUBE1-210ENST00000604967 NLRP2Q9NX02 1062 aa14.86□□□□□ -0.03
TUBE1-210ENST00000604967 CCDC7Q96M83 1385 aa14.85□□□□□ -0.03
TUBE1-210ENST00000604967 SBF2Q86WG5 1849 aa14.85□□□□□ -0.03
TUBE1-210ENST00000604967 TNS2Q63HR2 1409 aa14.84□□□□□ -0.03
TUBE1-210ENST00000604967 HSP90AB2PQ58FF8 381 aa14.84□□□□□ -0.03
TUBE1-210ENST00000604967 EMILIN1Q9Y6C2 1016 aa14.84□□□□□ -0.03
TUBE1-210ENST00000604967 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.03
TUBE1-210ENST00000604967 BAG6P46379 1132 aa14.83□□□□□ -0.04
TUBE1-210ENST00000604967 SF3B2Q13435 895 aaKnown RBP14.83□□□□□ -0.04
TUBE1-210ENST00000604967 PANK3Q9H999 370 aa14.83□□□□□ -0.04
TUBE1-210ENST00000604967 KIF7Q2M1P5 1343 aa14.83□□□□□ -0.04
TUBE1-210ENST00000604967 APBA3O96018 575 aa14.82□□□□□ -0.04
TUBE1-210ENST00000604967 AMPHP49418 695 aa14.82□□□□□ -0.04
TUBE1-210ENST00000604967 NBPF6Q5VWK0 638 aa14.82□□□□□ -0.04
TUBE1-210ENST00000604967 NBPF4Q96M43 638 aa14.82□□□□□ -0.04
TUBE1-210ENST00000604967 RTL1A6NKG5 1358 aa14.82□□□□□ -0.04
TUBE1-210ENST00000604967 BCL9O00512 1426 aa14.82□□□□□ -0.04
TUBE1-210ENST00000604967 MEGF6O75095 1541 aa14.82□□□□□ -0.04
TUBE1-210ENST00000604967 RREB1Q92766 1687 aa14.81□□□□□ -0.04
TUBE1-210ENST00000604967 KCNQ2O43526 872 aa14.81□□□□□ -0.04
TUBE1-210ENST00000604967 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
TUBE1-210ENST00000604967 CDCA7Q9BWT1 371 aaPredicted RBP14.81□□□□□ -0.04
TUBE1-210ENST00000604967 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
TUBE1-210ENST00000604967 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
TUBE1-210ENST00000604967 PSDA5PKW4 1024 aaPredicted RBP14.8□□□□□ -0.04
TUBE1-210ENST00000604967 IL2RBP14784 551 aa14.8□□□□□ -0.04
TUBE1-210ENST00000604967 PROM2Q8N271 834 aa14.8□□□□□ -0.04
TUBE1-210ENST00000604967 EXOC5O00471 708 aa14.79□□□□□ -0.04
TUBE1-210ENST00000604967 INSRP06213 1382 aa14.79□□□□□ -0.04
TUBE1-210ENST00000604967 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
TUBE1-210ENST00000604967 CGNL1Q0VF96 1302 aa14.78□□□□□ -0.04
TUBE1-210ENST00000604967 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
TUBE1-210ENST00000604967 FLT4P35916 1363 aa14.77□□□□□ -0.04
TUBE1-210ENST00000604967 BCL11BQ9C0K0 894 aaPredicted RBP14.77□□□□□ -0.05
TUBE1-210ENST00000604967 NCAPD2Q15021 1401 aa14.76□□□□□ -0.05
TUBE1-210ENST00000604967 TNNT2P45379 298 aaPredicted RBP14.76□□□□□ -0.05
TUBE1-210ENST00000604967 ACSBG1Q96GR2 724 aa14.76□□□□□ -0.05
TUBE1-210ENST00000604967 NHSQ6T4R5 1651 aa14.75□□□□□ -0.05
TUBE1-210ENST00000604967 WASHC2AQ641Q2 1341 aa14.75□□□□□ -0.05
TUBE1-210ENST00000604967 PER1O15534 1290 aaPredicted RBP14.75□□□□□ -0.05
TUBE1-210ENST00000604967 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
TUBE1-210ENST00000604967 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
TUBE1-210ENST00000604967 KIF24Q5T7B8 1368 aa14.74□□□□□ -0.05
TUBE1-210ENST00000604967 MAP2P11137 1827 aaKnown RBP14.74□□□□□ -0.05
TUBE1-210ENST00000604967 ANO8Q9HCE9 1232 aaPredicted RBP14.74□□□□□ -0.05
TUBE1-210ENST00000604967 PARD3Q8TEW0 1356 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms