RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 WDR17Q8IZU2 1322 aa18.41■□□□□ 0.54
NEK4P3-201ENST00000604859 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
NEK4P3-201ENST00000604859 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
NEK4P3-201ENST00000604859 CDCA7Q9BWT1 371 aaPredicted RBP18.39■□□□□ 0.53
NEK4P3-201ENST00000604859 BCL11BQ9C0K0 894 aaPredicted RBP18.39■□□□□ 0.53
NEK4P3-201ENST00000604859 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
NEK4P3-201ENST00000604859 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
NEK4P3-201ENST00000604859 LRRC37A3O60309 1634 aa18.38■□□□□ 0.53
NEK4P3-201ENST00000604859 AKAP12Q02952 1782 aa18.38■□□□□ 0.53
NEK4P3-201ENST00000604859 KCNQ2O43526 872 aa18.38■□□□□ 0.53
NEK4P3-201ENST00000604859 TTC21AQ8NDW8 1320 aa18.38■□□□□ 0.53
NEK4P3-201ENST00000604859 CPSF1Q10570 1443 aaKnown RBP18.38■□□□□ 0.53
NEK4P3-201ENST00000604859 SOX12O15370 315 aa18.37■□□□□ 0.53
NEK4P3-201ENST00000604859 MARCH10Q8NA82 808 aaPredicted RBP18.37■□□□□ 0.53
NEK4P3-201ENST00000604859 CARD10Q9BWT7 1032 aa18.37■□□□□ 0.53
NEK4P3-201ENST00000604859 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
NEK4P3-201ENST00000604859 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
NEK4P3-201ENST00000604859 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
NEK4P3-201ENST00000604859 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
NEK4P3-201ENST00000604859 PPP1R1BQ9UD71 204 aaPredicted RBP18.36■□□□□ 0.53
NEK4P3-201ENST00000604859 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
NEK4P3-201ENST00000604859 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
NEK4P3-201ENST00000604859 EXOC5O00471 708 aa18.34■□□□□ 0.53
NEK4P3-201ENST00000604859 BCL9O00512 1426 aa18.33■□□□□ 0.53
NEK4P3-201ENST00000604859 PROM2Q8N271 834 aa18.33■□□□□ 0.52
NEK4P3-201ENST00000604859 ANO8Q9HCE9 1232 aaPredicted RBP18.31■□□□□ 0.52
NEK4P3-201ENST00000604859 NFAT5O94916 1531 aa18.3■□□□□ 0.52
NEK4P3-201ENST00000604859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.3■□□□□ 0.52
NEK4P3-201ENST00000604859 CCDC7Q96M83 1385 aa18.3■□□□□ 0.52
NEK4P3-201ENST00000604859 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
NEK4P3-201ENST00000604859 YY1P25490 414 aa18.29■□□□□ 0.52
NEK4P3-201ENST00000604859 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
NEK4P3-201ENST00000604859 MON2Q7Z3U7 1717 aa18.28■□□□□ 0.52
NEK4P3-201ENST00000604859 ABCC6O95255 1503 aa18.28■□□□□ 0.52
NEK4P3-201ENST00000604859 TXNRD1Q16881 649 aa18.27■□□□□ 0.52
NEK4P3-201ENST00000604859 PDGFDQ9GZP0 370 aaPredicted RBP18.27■□□□□ 0.52
NEK4P3-201ENST00000604859 USP31Q70CQ4 1352 aa18.27■□□□□ 0.51
NEK4P3-201ENST00000604859 SBNO2Q9Y2G9 1366 aa18.27■□□□□ 0.51
NEK4P3-201ENST00000604859 CASZ1Q86V15 1759 aa18.27■□□□□ 0.51
NEK4P3-201ENST00000604859 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
NEK4P3-201ENST00000604859 CARD11Q9BXL7 1154 aa18.26■□□□□ 0.51
NEK4P3-201ENST00000604859 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
NEK4P3-201ENST00000604859 NME9Q86XW9 330 aa18.25■□□□□ 0.51
NEK4P3-201ENST00000604859 NLRP2Q9NX02 1062 aa18.25■□□□□ 0.51
NEK4P3-201ENST00000604859 STK32BQ9NY57 414 aa18.25■□□□□ 0.51
NEK4P3-201ENST00000604859 ZBTB7AO95365 584 aa18.24■□□□□ 0.51
NEK4P3-201ENST00000604859 SLC15A2Q16348 729 aa18.24■□□□□ 0.51
NEK4P3-201ENST00000604859 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
NEK4P3-201ENST00000604859 SLC12A5Q9H2X9 1139 aa18.24■□□□□ 0.51
NEK4P3-201ENST00000604859 CD163L1Q9NR16 1453 aa18.24■□□□□ 0.51
NEK4P3-201ENST00000604859 ERBB3P21860 1342 aa18.23■□□□□ 0.51
NEK4P3-201ENST00000604859 TNS2Q63HR2 1409 aa18.23■□□□□ 0.51
NEK4P3-201ENST00000604859 LTN1O94822 1766 aa18.23■□□□□ 0.51
NEK4P3-201ENST00000604859 USP54Q70EL1 1684 aa18.23■□□□□ 0.51
NEK4P3-201ENST00000604859 IL2RBP14784 551 aa18.22■□□□□ 0.51
NEK4P3-201ENST00000604859 PTGER2P43116 358 aa18.22■□□□□ 0.51
NEK4P3-201ENST00000604859 ACSBG1Q96GR2 724 aa18.22■□□□□ 0.51
NEK4P3-201ENST00000604859 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
NEK4P3-201ENST00000604859 ANKRD24Q8TF21 1146 aa18.21■□□□□ 0.51
NEK4P3-201ENST00000604859 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
NEK4P3-201ENST00000604859 NHSQ6T4R5 1651 aa18.19■□□□□ 0.5
NEK4P3-201ENST00000604859 EDC4Q6P2E9 1401 aaKnown RBP18.19■□□□□ 0.5
NEK4P3-201ENST00000604859 PUS7Q96PZ0 661 aaKnown RBP18.19■□□□□ 0.5
NEK4P3-201ENST00000604859 UTRNP46939 3433 aa18.17■□□□□ 0.5
NEK4P3-201ENST00000604859 MTFR1LQ9H019 292 aa18.17■□□□□ 0.5
NEK4P3-201ENST00000604859 MYOM1P52179 1685 aa18.16■□□□□ 0.5
NEK4P3-201ENST00000604859 IP6K1Q92551 441 aa18.16■□□□□ 0.5
NEK4P3-201ENST00000604859 BTAF1O14981 1849 aa18.16■□□□□ 0.5
NEK4P3-201ENST00000604859 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
NEK4P3-201ENST00000604859 SYT17Q9BSW7 474 aa18.15■□□□□ 0.5
NEK4P3-201ENST00000604859 TONSLQ96HA7 1378 aa18.15■□□□□ 0.5
NEK4P3-201ENST00000604859 SGIP1Q9BQI5 828 aa18.14■□□□□ 0.49
NEK4P3-201ENST00000604859 FHDC1Q9C0D6 1143 aaPredicted RBP18.14■□□□□ 0.49
NEK4P3-201ENST00000604859 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
NEK4P3-201ENST00000604859 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
NEK4P3-201ENST00000604859 LRRC4BQ9NT99 713 aa18.12■□□□□ 0.49
NEK4P3-201ENST00000604859 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
NEK4P3-201ENST00000604859 PAPPAQ13219 1627 aa18.1■□□□□ 0.49
NEK4P3-201ENST00000604859 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
NEK4P3-201ENST00000604859 COG3Q96JB2 828 aa18.1■□□□□ 0.49
NEK4P3-201ENST00000604859 ARXQ96QS3 562 aa18.1■□□□□ 0.49
NEK4P3-201ENST00000604859 TESK2Q96S53 571 aa18.1■□□□□ 0.49
NEK4P3-201ENST00000604859 FAM208AQ9UK61 1670 aaKnown RBP18.09■□□□□ 0.49
NEK4P3-201ENST00000604859 ZNF827Q17R98 1081 aa18.09■□□□□ 0.49
NEK4P3-201ENST00000604859 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
NEK4P3-201ENST00000604859 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
NEK4P3-201ENST00000604859 AMPHP49418 695 aa18.08■□□□□ 0.48
NEK4P3-201ENST00000604859 FBLN1P23142 703 aa18.07■□□□□ 0.48
NEK4P3-201ENST00000604859 HOXC9P31274 260 aa18.07■□□□□ 0.48
NEK4P3-201ENST00000604859 AKT1S1Q96B36 256 aa18.07■□□□□ 0.48
NEK4P3-201ENST00000604859 CHD4Q14839 1912 aa18.07■□□□□ 0.48
NEK4P3-201ENST00000604859 PRIM1P49642 420 aaKnown RBP18.06■□□□□ 0.48
NEK4P3-201ENST00000604859 RGPD2P0DJD1 1756 aa18.05■□□□□ 0.48
NEK4P3-201ENST00000604859 ZCRB1Q8TBF4 217 aaKnown RBP18.05■□□□□ 0.48
NEK4P3-201ENST00000604859 SLC16A10Q8TF71 515 aa18.05■□□□□ 0.48
NEK4P3-201ENST00000604859 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
NEK4P3-201ENST00000604859 ZNF784Q8NCA9 323 aaPredicted RBP18.04■□□□□ 0.48
NEK4P3-201ENST00000604859 ANKRD36BQ8N2N9 1353 aa18.04■□□□□ 0.48
NEK4P3-201ENST00000604859 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
NEK4P3-201ENST00000604859 TFCP2L1Q9NZI6 479 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms