RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 LRRC37A3O60309 1634 aa17.22■□□□□ 0.35
PDLIM1P1-201ENST00000604187 SRPK2P78362 688 aaKnown RBP17.22■□□□□ 0.35
PDLIM1P1-201ENST00000604187 CASZ1Q86V15 1759 aa17.22■□□□□ 0.35
PDLIM1P1-201ENST00000604187 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
PDLIM1P1-201ENST00000604187 MYOM1P52179 1685 aa17.2■□□□□ 0.34
PDLIM1P1-201ENST00000604187 NLRP6P59044 892 aa17.2■□□□□ 0.34
PDLIM1P1-201ENST00000604187 TXNRD1Q16881 649 aa17.2■□□□□ 0.34
PDLIM1P1-201ENST00000604187 RGPD3A6NKT7 1758 aaPredicted RBP17.2■□□□□ 0.34
PDLIM1P1-201ENST00000604187 RGPD4Q7Z3J3 1758 aa17.2■□□□□ 0.34
PDLIM1P1-201ENST00000604187 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
PDLIM1P1-201ENST00000604187 CABP2Q9NPB3 220 aa17.19■□□□□ 0.34
PDLIM1P1-201ENST00000604187 BCL9O00512 1426 aa17.19■□□□□ 0.34
PDLIM1P1-201ENST00000604187 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
PDLIM1P1-201ENST00000604187 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1P1-201ENST00000604187 C1QTNF8P60827 252 aa17.18■□□□□ 0.34
PDLIM1P1-201ENST00000604187 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1P1-201ENST00000604187 MTFR1LQ9H019 292 aa17.18■□□□□ 0.34
PDLIM1P1-201ENST00000604187 USP6P35125 1406 aa17.17■□□□□ 0.34
PDLIM1P1-201ENST00000604187 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
PDLIM1P1-201ENST00000604187 SLIT3O75094 1523 aa17.16■□□□□ 0.34
PDLIM1P1-201ENST00000604187 SGIP1Q9BQI5 828 aa17.16■□□□□ 0.34
PDLIM1P1-201ENST00000604187 CPSF1Q10570 1443 aaKnown RBP17.15■□□□□ 0.34
PDLIM1P1-201ENST00000604187 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
PDLIM1P1-201ENST00000604187 ARXQ96QS3 562 aa17.14■□□□□ 0.33
PDLIM1P1-201ENST00000604187 CABP1Q9NZU7 370 aa17.14■□□□□ 0.33
PDLIM1P1-201ENST00000604187 CENPJQ9HC77 1338 aaPredicted RBP17.14■□□□□ 0.33
PDLIM1P1-201ENST00000604187 NBPF1Q3BBV0 1214 aa17.13■□□□□ 0.33
PDLIM1P1-201ENST00000604187 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
PDLIM1P1-201ENST00000604187 SOX12O15370 315 aa17.12■□□□□ 0.33
PDLIM1P1-201ENST00000604187 EXOC5O00471 708 aa17.11■□□□□ 0.33
PDLIM1P1-201ENST00000604187 ARHGEF25Q86VW2 580 aa17.11■□□□□ 0.33
PDLIM1P1-201ENST00000604187 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
PDLIM1P1-201ENST00000604187 TNS2Q63HR2 1409 aa17.09■□□□□ 0.33
PDLIM1P1-201ENST00000604187 CEP350Q5VT06 3117 aa17.08■□□□□ 0.33
PDLIM1P1-201ENST00000604187 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.32
PDLIM1P1-201ENST00000604187 GPR162Q16538 588 aa17.08■□□□□ 0.32
PDLIM1P1-201ENST00000604187 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
PDLIM1P1-201ENST00000604187 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
PDLIM1P1-201ENST00000604187 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
PDLIM1P1-201ENST00000604187 ZNF827Q17R98 1081 aa17.07■□□□□ 0.32
PDLIM1P1-201ENST00000604187 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
PDLIM1P1-201ENST00000604187 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
PDLIM1P1-201ENST00000604187 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
PDLIM1P1-201ENST00000604187 PIK3C2AO00443 1686 aa17.06■□□□□ 0.32
PDLIM1P1-201ENST00000604187 COL18A1P39060 1754 aa17.05■□□□□ 0.32
PDLIM1P1-201ENST00000604187 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
PDLIM1P1-201ENST00000604187 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
PDLIM1P1-201ENST00000604187 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
PDLIM1P1-201ENST00000604187 GOLGB1Q14789 3259 aaKnown RBP17.03■□□□□ 0.32
PDLIM1P1-201ENST00000604187 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
PDLIM1P1-201ENST00000604187 ABCC6O95255 1503 aa17.02■□□□□ 0.32
PDLIM1P1-201ENST00000604187 LRRC4BQ9NT99 713 aa17.02■□□□□ 0.32
PDLIM1P1-201ENST00000604187 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
PDLIM1P1-201ENST00000604187 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
PDLIM1P1-201ENST00000604187 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
PDLIM1P1-201ENST00000604187 POLD1P28340 1107 aa17.01■□□□□ 0.31
PDLIM1P1-201ENST00000604187 NLRP2Q9NX02 1062 aa17.01■□□□□ 0.31
PDLIM1P1-201ENST00000604187 NFAT5O94916 1531 aa17.01■□□□□ 0.31
PDLIM1P1-201ENST00000604187 TTC21AQ8NDW8 1320 aa17■□□□□ 0.31
PDLIM1P1-201ENST00000604187 AKAP12Q02952 1782 aa17■□□□□ 0.31
PDLIM1P1-201ENST00000604187 QRICH2Q9H0J4 1663 aa17■□□□□ 0.31
PDLIM1P1-201ENST00000604187 ERBB3P21860 1342 aa16.99■□□□□ 0.31
PDLIM1P1-201ENST00000604187 IL2RBP14784 551 aa16.99■□□□□ 0.31
PDLIM1P1-201ENST00000604187 AKT1S1Q96B36 256 aa16.99■□□□□ 0.31
PDLIM1P1-201ENST00000604187 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1P1-201ENST00000604187 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
PDLIM1P1-201ENST00000604187 NLGN2Q8NFZ4 835 aa16.98■□□□□ 0.31
PDLIM1P1-201ENST00000604187 PNPLA7Q6ZV29 1317 aa16.97■□□□□ 0.31
PDLIM1P1-201ENST00000604187 SLC16A10Q8TF71 515 aa16.97■□□□□ 0.31
PDLIM1P1-201ENST00000604187 KTN1Q86UP2 1357 aaKnown RBP16.96■□□□□ 0.31
PDLIM1P1-201ENST00000604187 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
PDLIM1P1-201ENST00000604187 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
PDLIM1P1-201ENST00000604187 TFCP2L1Q9NZI6 479 aa16.95■□□□□ 0.3
PDLIM1P1-201ENST00000604187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDLIM1P1-201ENST00000604187 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
PDLIM1P1-201ENST00000604187 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDLIM1P1-201ENST00000604187 KCNQ4P56696 695 aa16.93■□□□□ 0.3
PDLIM1P1-201ENST00000604187 USP31Q70CQ4 1352 aa16.91■□□□□ 0.3
PDLIM1P1-201ENST00000604187 SHANK3Q9BYB0 1731 aa16.91■□□□□ 0.3
PDLIM1P1-201ENST00000604187 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
PDLIM1P1-201ENST00000604187 NME9Q86XW9 330 aa16.91■□□□□ 0.3
PDLIM1P1-201ENST00000604187 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
PDLIM1P1-201ENST00000604187 CHD4Q14839 1912 aa16.9■□□□□ 0.3
PDLIM1P1-201ENST00000604187 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
PDLIM1P1-201ENST00000604187 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
PDLIM1P1-201ENST00000604187 BTAF1O14981 1849 aa16.89■□□□□ 0.29
PDLIM1P1-201ENST00000604187 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
PDLIM1P1-201ENST00000604187 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
PDLIM1P1-201ENST00000604187 L3MBTL2Q969R5 705 aa16.87■□□□□ 0.29
PDLIM1P1-201ENST00000604187 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
PDLIM1P1-201ENST00000604187 SBNO2Q9Y2G9 1366 aa16.87■□□□□ 0.29
PDLIM1P1-201ENST00000604187 ANKRD36BQ8N2N9 1353 aa16.86■□□□□ 0.29
PDLIM1P1-201ENST00000604187 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
PDLIM1P1-201ENST00000604187 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
PDLIM1P1-201ENST00000604187 GPBP1L1Q9HC44 474 aaPredicted RBP16.85■□□□□ 0.29
PDLIM1P1-201ENST00000604187 CCNL1Q9UK58 526 aaPredicted RBP16.85■□□□□ 0.29
PDLIM1P1-201ENST00000604187 NSD2O96028 1365 aa16.85■□□□□ 0.29
PDLIM1P1-201ENST00000604187 COL23A1Q86Y22 540 aaPredicted RBP16.83■□□□□ 0.28
PDLIM1P1-201ENST00000604187 ZNF526Q8TF50 670 aaPredicted RBP16.83■□□□□ 0.28
PDLIM1P1-201ENST00000604187 CD163L1Q9NR16 1453 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms