RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, human

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-209	ENST00000603677	EP400	Q96L91	3159 aa		33.02	■■■□□ 2.88
SSX2IP-209	ENST00000603677		A0A0G2JS52	829 aa		33.01	■■■□□ 2.87
SSX2IP-209	ENST00000603677	MYT1	Q01538	1121 aa		33.01	■■■□□ 2.87
SSX2IP-209	ENST00000603677	WDR17	Q8IZU2	1322 aa		33	■■■□□ 2.87
SSX2IP-209	ENST00000603677	COG3	Q96JB2	828 aa		32.99	■■■□□ 2.87
SSX2IP-209	ENST00000603677	BLM	P54132	1417 aa	Predicted RBP	32.97	■■■□□ 2.87
SSX2IP-209	ENST00000603677	ZBTB7C	A1YPR0	619 aa		32.97	■■■□□ 2.87
SSX2IP-209	ENST00000603677	HSPA5	P11021	654 aa	Known RBP	32.96	■■■□□ 2.87
SSX2IP-209	ENST00000603677	ZRANB1	Q9UGI0	708 aa		32.96	■■■□□ 2.87
SSX2IP-209	ENST00000603677	AXIN2	Q9Y2T1	843 aa		32.96	■■■□□ 2.87
SSX2IP-209	ENST00000603677	C11orf95	C9JLR9	678 aa	Predicted RBP	32.95	■■■□□ 2.87
SSX2IP-209	ENST00000603677	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.95	■■■□□ 2.87
SSX2IP-209	ENST00000603677	MYOM1	P52179	1685 aa		32.94	■■■□□ 2.86
SSX2IP-209	ENST00000603677	SOX12	O15370	315 aa		32.93	■■■□□ 2.86
SSX2IP-209	ENST00000603677	TOM1L2	Q6ZVM7	507 aa		32.93	■■■□□ 2.86
SSX2IP-209	ENST00000603677	USP35	Q9P2H5	1018 aa		32.93	■■■□□ 2.86
SSX2IP-209	ENST00000603677	FYB1	O15117	783 aa		32.91	■■■□□ 2.86
SSX2IP-209	ENST00000603677	CARD10	Q9BWT7	1032 aa		32.91	■■■□□ 2.86
SSX2IP-209	ENST00000603677	LTN1	O94822	1766 aa		32.91	■■■□□ 2.86
SSX2IP-209	ENST00000603677	SF3B2	Q13435	895 aa	Known RBP	32.9	■■■□□ 2.86
SSX2IP-209	ENST00000603677	RGPD5	Q99666	1765 aa		32.88	■■■□□ 2.85
SSX2IP-209	ENST00000603677	PARP4	Q9UKK3	1724 aa	Known RBP	32.88	■■■□□ 2.85
SSX2IP-209	ENST00000603677	CCDC7	Q96M83	1385 aa		32.88	■■■□□ 2.85
SSX2IP-209	ENST00000603677	PDE3B	Q13370	1112 aa		32.87	■■■□□ 2.85
SSX2IP-209	ENST00000603677	FAM196A	Q6ZSG2	479 aa		32.87	■■■□□ 2.85
SSX2IP-209	ENST00000603677	CSB-PGBD3	P0DP91	1061 aa		32.86	■■■□□ 2.85
SSX2IP-209	ENST00000603677	ERBB3	P21860	1342 aa		32.85	■■■□□ 2.85
SSX2IP-209	ENST00000603677	IP6K1	Q92551	441 aa		32.85	■■■□□ 2.85
SSX2IP-209	ENST00000603677	CARD14	Q9BXL6	1004 aa		32.83	■■■□□ 2.85
SSX2IP-209	ENST00000603677	KIF20B	Q96Q89	1820 aa		32.83	■■■□□ 2.85
SSX2IP-209	ENST00000603677	RTL1	A6NKG5	1358 aa		32.82	■■■□□ 2.84
SSX2IP-209	ENST00000603677	KIF24	Q5T7B8	1368 aa		32.82	■■■□□ 2.84
SSX2IP-209	ENST00000603677	CGNL1	Q0VF96	1302 aa		32.81	■■■□□ 2.84
SSX2IP-209	ENST00000603677	NSD3	Q9BZ95	1437 aa		32.8	■■■□□ 2.84
SSX2IP-209	ENST00000603677	GGNBP2	Q9H3C7	697 aa		32.79	■■■□□ 2.84
SSX2IP-209	ENST00000603677	FAM208A	Q9UK61	1670 aa	Known RBP	32.78	■■■□□ 2.84
SSX2IP-209	ENST00000603677	RGPD1	P0DJD0	1748 aa		32.78	■■■□□ 2.84
SSX2IP-209	ENST00000603677	DDB1	Q16531	1140 aa		32.78	■■■□□ 2.84
SSX2IP-209	ENST00000603677	WNK3	Q9BYP7	1800 aa		32.78	■■■□□ 2.84
SSX2IP-209	ENST00000603677	MAP3K19	Q56UN5	1328 aa		32.77	■■■□□ 2.84
SSX2IP-209	ENST00000603677	ANKRD24	Q8TF21	1146 aa		32.76	■■■□□ 2.83
SSX2IP-209	ENST00000603677	BAG6	P46379	1132 aa		32.75	■■■□□ 2.83
SSX2IP-209	ENST00000603677	AMPH	P49418	695 aa		32.75	■■■□□ 2.83
SSX2IP-209	ENST00000603677	DISP2	A7MBM2	1401 aa		32.75	■■■□□ 2.83
SSX2IP-209	ENST00000603677	HOXC9	P31274	260 aa		32.73	■■■□□ 2.83
SSX2IP-209	ENST00000603677	POLR3GL	Q9BT43	218 aa		32.72	■■■□□ 2.83
SSX2IP-209	ENST00000603677	NLRP2	Q9NX02	1062 aa		32.72	■■■□□ 2.83
SSX2IP-209	ENST00000603677	BCL9	O00512	1426 aa		32.71	■■■□□ 2.83
SSX2IP-209	ENST00000603677	LRRC37A3	O60309	1634 aa		32.71	■■■□□ 2.83
SSX2IP-209	ENST00000603677	OVOS2	A0A0G2JMS6	1433 aa		32.7	■■■□□ 2.83
SSX2IP-209	ENST00000603677	EXOC5	O00471	708 aa		32.7	■■■□□ 2.83
SSX2IP-209	ENST00000603677	NSD2	O96028	1365 aa		32.69	■■■□□ 2.82
SSX2IP-209	ENST00000603677	FAM182B	Q5T319	152 aa		32.68	■■■□□ 2.82
SSX2IP-209	ENST00000603677	PANK3	Q9H999	370 aa		32.67	■■■□□ 2.82
SSX2IP-209	ENST00000603677	IL2RB	P14784	551 aa		32.66	■■■□□ 2.82
SSX2IP-209	ENST00000603677	FLT4	P35916	1363 aa		32.66	■■■□□ 2.82
SSX2IP-209	ENST00000603677	INSR	P06213	1382 aa		32.65	■■■□□ 2.82
SSX2IP-209	ENST00000603677	PARD3	Q8TEW0	1356 aa		32.65	■■■□□ 2.82
SSX2IP-209	ENST00000603677	SMG6	Q86US8	1419 aa	Known RBP	32.65	■■■□□ 2.82
SSX2IP-209	ENST00000603677	PEAK1	Q9H792	1746 aa		32.64	■■■□□ 2.82
SSX2IP-209	ENST00000603677	TNS1	Q9HBL0	1735 aa	Known RBP	32.63	■■■□□ 2.81
SSX2IP-209	ENST00000603677	ANKRD26	Q9UPS8	1709 aa		32.63	■■■□□ 2.81
SSX2IP-209	ENST00000603677	RRS1	Q15050	365 aa	Known RBP	32.63	■■■□□ 2.81
SSX2IP-209	ENST00000603677	DEFB132	Q7Z7B7	95 aa		32.63	■■■□□ 2.81
SSX2IP-209	ENST00000603677	TNS2	Q63HR2	1409 aa		32.62	■■■□□ 2.81
SSX2IP-209	ENST00000603677	TRIM37	O94972	964 aa		32.62	■■■□□ 2.81
SSX2IP-209	ENST00000603677	FBLN1	P23142	703 aa		32.61	■■■□□ 2.81
SSX2IP-209	ENST00000603677	KIF7	Q2M1P5	1343 aa		32.6	■■■□□ 2.81
SSX2IP-209	ENST00000603677	MARCH10	Q8NA82	808 aa	Predicted RBP	32.58	■■■□□ 2.81
SSX2IP-209	ENST00000603677	KNSTRN	Q9Y448	316 aa		32.57	■■■□□ 2.8
SSX2IP-209	ENST00000603677	LTV1	Q96GA3	475 aa	Predicted RBP	32.56	■■■□□ 2.8
SSX2IP-209	ENST00000603677	APBA3	O96018	575 aa		32.55	■■■□□ 2.8
SSX2IP-209	ENST00000603677	MAP2	P11137	1827 aa	Known RBP	32.55	■■■□□ 2.8
SSX2IP-209	ENST00000603677	SBF2	Q86WG5	1849 aa		32.55	■■■□□ 2.8
SSX2IP-209	ENST00000603677	WASHC2A	Q641Q2	1341 aa		32.54	■■■□□ 2.8
SSX2IP-209	ENST00000603677	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.54	■■■□□ 2.8
SSX2IP-209	ENST00000603677	HSP90AB2P	Q58FF8	381 aa		32.53	■■■□□ 2.8
SSX2IP-209	ENST00000603677	EN1	Q05925	392 aa	Predicted RBP	32.52	■■■□□ 2.8
SSX2IP-209	ENST00000603677	CAMKK2	Q96RR4	588 aa		32.52	■■■□□ 2.8
SSX2IP-209	ENST00000603677	PLSCR1	O15162	318 aa		32.5	■■■□□ 2.79
SSX2IP-209	ENST00000603677	POLK	Q9UBT6	870 aa		32.5	■■■□□ 2.79
SSX2IP-209	ENST00000603677	EMILIN1	Q9Y6C2	1016 aa		32.5	■■■□□ 2.79
SSX2IP-209	ENST00000603677	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.49	■■■□□ 2.79
SSX2IP-209	ENST00000603677	RGPD4	Q7Z3J3	1758 aa		32.49	■■■□□ 2.79
SSX2IP-209	ENST00000603677	NBPF6	Q5VWK0	638 aa		32.48	■■■□□ 2.79
SSX2IP-209	ENST00000603677	NBPF4	Q96M43	638 aa		32.48	■■■□□ 2.79
SSX2IP-209	ENST00000603677	RGPD2	P0DJD1	1756 aa		32.45	■■■□□ 2.79
SSX2IP-209	ENST00000603677	RAPGEF4	Q8WZA2	1011 aa		32.45	■■■□□ 2.79
SSX2IP-209	ENST00000603677	MORC1	Q86VD1	984 aa		32.44	■■■□□ 2.78
SSX2IP-209	ENST00000603677	EZH2	Q15910	746 aa	Known RBP	32.43	■■■□□ 2.78
SSX2IP-209	ENST00000603677	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.43	■■■□□ 2.78
SSX2IP-209	ENST00000603677	ZCRB1	Q8TBF4	217 aa	Known RBP	32.43	■■■□□ 2.78
SSX2IP-209	ENST00000603677	PLEKHG2	Q9H7P9	1386 aa		32.43	■■■□□ 2.78
SSX2IP-209	ENST00000603677	NCAPD2	Q15021	1401 aa		32.43	■■■□□ 2.78
SSX2IP-209	ENST00000603677	PPM1G	O15355	546 aa	Predicted RBP	32.42	■■■□□ 2.78
SSX2IP-209	ENST00000603677	PER1	O15534	1290 aa	Predicted RBP	32.42	■■■□□ 2.78
SSX2IP-209	ENST00000603677	NPC1L1	Q9UHC9	1359 aa		32.41	■■■□□ 2.78
SSX2IP-209	ENST00000603677	RREB1	Q92766	1687 aa		32.4	■■■□□ 2.78
SSX2IP-209	ENST00000603677	TAT	P17735	454 aa	Predicted RBP	32.4	■■■□□ 2.78
SSX2IP-209	ENST00000603677	NHS	Q6T4R5	1651 aa		32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms