RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 MRPL14Q6P1L8 145 aaKnown RBP11.71□□□□□ -0.53
TUBE1-205ENST00000603651 CCDC116Q8IYX3 515 aa11.71□□□□□ -0.53
TUBE1-205ENST00000603651 ZFP42Q96MM3 310 aa11.71□□□□□ -0.53
TUBE1-205ENST00000603651 KCTD15Q96SI1 283 aaPredicted RBP11.71□□□□□ -0.53
TUBE1-205ENST00000603651 KLF16Q9BXK1 252 aaPredicted RBP11.71□□□□□ -0.53
TUBE1-205ENST00000603651 DZIP3Q86Y13 1208 aaKnown RBP11.69□□□□□ -0.54
TUBE1-205ENST00000603651 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
TUBE1-205ENST00000603651 GPSM3Q9Y4H4 160 aa11.68□□□□□ -0.54
TUBE1-205ENST00000603651 PPP1R26Q5T8A7 1209 aaPredicted RBP11.67□□□□□ -0.54
TUBE1-205ENST00000603651 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
TUBE1-205ENST00000603651 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
TUBE1-205ENST00000603651 PCDHB9Q9Y5E1 797 aa11.66□□□□□ -0.54
TUBE1-205ENST00000603651 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
TUBE1-205ENST00000603651 UPP2O95045 317 aa11.65□□□□□ -0.54
TUBE1-205ENST00000603651 BMP2P12643 396 aa11.65□□□□□ -0.54
TUBE1-205ENST00000603651 CDV3Q9UKY7 258 aaKnown RBP11.65□□□□□ -0.54
TUBE1-205ENST00000603651 CBLBQ13191 982 aa11.64□□□□□ -0.55
TUBE1-205ENST00000603651 INTS6LQ5JSJ4 861 aaKnown RBP11.64□□□□□ -0.55
TUBE1-205ENST00000603651 MTMR14Q8NCE2 650 aa11.64□□□□□ -0.55
TUBE1-205ENST00000603651 BANK1Q8NDB2 785 aa11.64□□□□□ -0.55
TUBE1-205ENST00000603651 PGPEP1Q9NXJ5 209 aa11.64□□□□□ -0.55
TUBE1-205ENST00000603651 ZBBXA8MT70 800 aa11.63□□□□□ -0.55
TUBE1-205ENST00000603651 FBXO45P0C2W1 286 aa11.62□□□□□ -0.55
TUBE1-205ENST00000603651 NBPF20Q3BBV1 942 aa11.62□□□□□ -0.55
TUBE1-205ENST00000603651 TREML4Q6UXN2 200 aa11.62□□□□□ -0.55
TUBE1-205ENST00000603651 LINC00528Q8N1L1 170 aa11.61□□□□□ -0.55
TUBE1-205ENST00000603651 MEIOBQ8N635 442 aa11.61□□□□□ -0.55
TUBE1-205ENST00000603651 TMPRSS4Q9NRS4 437 aa11.61□□□□□ -0.55
TUBE1-205ENST00000603651 WFS1O76024 890 aa11.6□□□□□ -0.55
TUBE1-205ENST00000603651 DHX9Q08211 1270 aaKnown RBP11.6□□□□□ -0.55
TUBE1-205ENST00000603651 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
TUBE1-205ENST00000603651 VEGFBP49765 207 aa11.59□□□□□ -0.55
TUBE1-205ENST00000603651 TERTO14746 1132 aaKnown RBP11.58□□□□□ -0.56
TUBE1-205ENST00000603651 AGBL1Q96MI9 1066 aa11.58□□□□□ -0.56
TUBE1-205ENST00000603651 MAN1A2O60476 641 aa11.57□□□□□ -0.56
TUBE1-205ENST00000603651 ERVH48-1M5A8F1 160 aa11.56□□□□□ -0.56
TUBE1-205ENST00000603651 APBB1O00213 710 aa11.56□□□□□ -0.56
TUBE1-205ENST00000603651 RELBQ01201 579 aa11.56□□□□□ -0.56
TUBE1-205ENST00000603651 TSEN34Q9BSV6 310 aaKnown RBP11.56□□□□□ -0.56
TUBE1-205ENST00000603651 NFX1Q12986 1120 aaKnown RBP11.55□□□□□ -0.56
TUBE1-205ENST00000603651 NR1H3Q13133 447 aa11.55□□□□□ -0.56
TUBE1-205ENST00000603651 TBC1D2BQ9UPU7 963 aa11.55□□□□□ -0.56
TUBE1-205ENST00000603651 FIGNL2A6NMB9 653 aa11.54□□□□□ -0.56
TUBE1-205ENST00000603651 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
TUBE1-205ENST00000603651 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
TUBE1-205ENST00000603651 CYLDQ9NQC7 956 aa11.53□□□□□ -0.56
TUBE1-205ENST00000603651 NXF1Q9UBU9 619 aaKnown RBP11.53□□□□□ -0.56
TUBE1-205ENST00000603651 ZNF395Q9H8N7 513 aaPredicted RBP11.52□□□□□ -0.57
TUBE1-205ENST00000603651 ESPNB1AK53 854 aa11.51□□□□□ -0.57
TUBE1-205ENST00000603651 GPR37L1O60883 481 aa11.51□□□□□ -0.57
TUBE1-205ENST00000603651 Q6ZVU0 165 aa11.51□□□□□ -0.57
TUBE1-205ENST00000603651 SLC16A10Q8TF71 515 aa11.51□□□□□ -0.57
TUBE1-205ENST00000603651 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
TUBE1-205ENST00000603651 PRM3Q9NNZ6 103 aa11.5□□□□□ -0.57
TUBE1-205ENST00000603651 TTLL8A6PVC2 850 aa11.49□□□□□ -0.57
TUBE1-205ENST00000603651 DNMT3LQ9UJW3 386 aa11.49□□□□□ -0.57
TUBE1-205ENST00000603651 SOS2Q07890 1332 aaPredicted RBP11.49□□□□□ -0.57
TUBE1-205ENST00000603651 ABL2P42684 1182 aa11.48□□□□□ -0.57
TUBE1-205ENST00000603651 INSM2Q96T92 566 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-205ENST00000603651 POLMQ9NP87 494 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-205ENST00000603651 ADD1P35611 737 aaKnown RBP11.47□□□□□ -0.57
TUBE1-205ENST00000603651 LCE2AQ5TA79 106 aaPredicted RBP11.47□□□□□ -0.57
TUBE1-205ENST00000603651 SOCS7O14512 581 aa11.46□□□□□ -0.57
TUBE1-205ENST00000603651 LILRA1O75019 489 aa11.46□□□□□ -0.57
TUBE1-205ENST00000603651 LCE2CQ5TA81 110 aa11.46□□□□□ -0.57
TUBE1-205ENST00000603651 GDPD2Q9HCC8 539 aa11.46□□□□□ -0.57
TUBE1-205ENST00000603651 SPINT1O43278 529 aa11.45□□□□□ -0.58
TUBE1-205ENST00000603651 ADH1AP07327 375 aa11.45□□□□□ -0.58
TUBE1-205ENST00000603651 CTSOP43234 321 aaPredicted RBP11.45□□□□□ -0.58
TUBE1-205ENST00000603651 SEPT12Q8IYM1 358 aa11.45□□□□□ -0.58
TUBE1-205ENST00000603651 PCDHB11Q9Y5F2 797 aa11.44□□□□□ -0.58
TUBE1-205ENST00000603651 H3BM21 787 aa11.43□□□□□ -0.58
TUBE1-205ENST00000603651 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.43□□□□□ -0.58
TUBE1-205ENST00000603651 RNF20Q5VTR2 975 aa11.43□□□□□ -0.58
TUBE1-205ENST00000603651 PTGIRP43119 386 aa11.42□□□□□ -0.58
TUBE1-205ENST00000603651 VAC14Q08AM6 782 aa11.42□□□□□ -0.58
TUBE1-205ENST00000603651 ESF1Q9H501 851 aaKnown RBP11.42□□□□□ -0.58
TUBE1-205ENST00000603651 MCCD1P59942 119 aaPredicted RBP11.41□□□□□ -0.58
TUBE1-205ENST00000603651 IRF5Q13568 498 aa11.41□□□□□ -0.58
TUBE1-205ENST00000603651 ZNF592Q92610 1267 aa11.41□□□□□ -0.58
TUBE1-205ENST00000603651 IRF7Q92985 503 aa11.41□□□□□ -0.58
TUBE1-205ENST00000603651 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
TUBE1-205ENST00000603651 GMPRP36959 345 aa11.4□□□□□ -0.58
TUBE1-205ENST00000603651 MCM6Q14566 821 aa11.4□□□□□ -0.58
TUBE1-205ENST00000603651 MEN1O00255 615 aa11.39□□□□□ -0.59
TUBE1-205ENST00000603651 ATP5J2-PTCD1G3V325 749 aa11.38□□□□□ -0.59
TUBE1-205ENST00000603651 PPFIA3O75145 1194 aa11.38□□□□□ -0.59
TUBE1-205ENST00000603651 SCTRP47872 440 aa11.38□□□□□ -0.59
TUBE1-205ENST00000603651 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
TUBE1-205ENST00000603651 PTSQ03393 145 aa11.38□□□□□ -0.59
TUBE1-205ENST00000603651 CC2D2BQ6DHV5 1058 aa11.38□□□□□ -0.59
TUBE1-205ENST00000603651 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
TUBE1-205ENST00000603651 KDF1Q8NAX2 398 aaPredicted RBP11.38□□□□□ -0.59
TUBE1-205ENST00000603651 CEP126Q9P2H0 1117 aa11.38□□□□□ -0.59
TUBE1-205ENST00000603651 TRIM52Q96A61 297 aa11.37□□□□□ -0.59
TUBE1-205ENST00000603651 RNF217Q8TC41 542 aa11.36□□□□□ -0.59
TUBE1-205ENST00000603651 ERVK-9P63128 1117 aa11.35□□□□□ -0.59
TUBE1-205ENST00000603651 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
TUBE1-205ENST00000603651 CDCA7Q9BWT1 371 aaPredicted RBP11.35□□□□□ -0.59
TUBE1-205ENST00000603651 CCDC85AQ96PX6 553 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms