RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 RTL1A6NKG5 1358 aa25.51■■□□□ 1.68
UBE2E3-209ENST00000602710 CPDO75976 1380 aa25.51■■□□□ 1.68
UBE2E3-209ENST00000602710 JCADQ9P266 1359 aa25.51■■□□□ 1.68
UBE2E3-209ENST00000602710 AXIN2Q9Y2T1 843 aa25.51■■□□□ 1.67
UBE2E3-209ENST00000602710 IL13P35225 146 aa25.5■■□□□ 1.67
UBE2E3-209ENST00000602710 EIF4A2Q14240 407 aaKnown RBP25.5■■□□□ 1.67
UBE2E3-209ENST00000602710 FBXO41Q8TF61 875 aa25.5■■□□□ 1.67
UBE2E3-209ENST00000602710 COL18A1P39060 1754 aa25.49■■□□□ 1.67
UBE2E3-209ENST00000602710 RGPD5Q99666 1765 aa25.49■■□□□ 1.67
UBE2E3-209ENST00000602710 WDR43Q15061 677 aaKnown RBP eCLIP25.49■■□□□ 1.67
UBE2E3-209ENST00000602710 PRDM11Q9NQV5 511 aa25.49■■□□□ 1.67
UBE2E3-209ENST00000602710 ADAMTS8Q9UP79 889 aa25.49■■□□□ 1.67
UBE2E3-209ENST00000602710 NUTM2BA6NNL0 878 aaPredicted RBP25.48■■□□□ 1.67
UBE2E3-209ENST00000602710 NUTM2EB1AL46 878 aaPredicted RBP25.48■■□□□ 1.67
UBE2E3-209ENST00000602710 NUTM2AQ8IVF1 878 aaPredicted RBP25.48■■□□□ 1.67
UBE2E3-209ENST00000602710 U2SURPO15042 1029 aaKnown RBP25.48■■□□□ 1.67
UBE2E3-209ENST00000602710 LTV1Q96GA3 475 aaPredicted RBP25.48■■□□□ 1.67
UBE2E3-209ENST00000602710 NUDCQ9Y266 331 aa25.47■■□□□ 1.67
UBE2E3-209ENST00000602710 FAM83GA6ND36 823 aa25.45■■□□□ 1.66
UBE2E3-209ENST00000602710 ADAMTS2O95450 1211 aa25.44■■□□□ 1.66
UBE2E3-209ENST00000602710 U2AF1L5P0DN76 240 aaPredicted RBP25.44■■□□□ 1.66
UBE2E3-209ENST00000602710 U2AF1Q01081 240 aaKnown RBP eCLIP25.44■■□□□ 1.66
UBE2E3-209ENST00000602710 BLMP54132 1417 aaPredicted RBP25.43■■□□□ 1.66
UBE2E3-209ENST00000602710 ANKRD24Q8TF21 1146 aa25.42■■□□□ 1.66
UBE2E3-209ENST00000602710 LMO7Q8WWI1 1683 aa25.41■■□□□ 1.66
UBE2E3-209ENST00000602710 ABCC6O95255 1503 aa25.41■■□□□ 1.66
UBE2E3-209ENST00000602710 CAMTA1Q9Y6Y1 1673 aa25.41■■□□□ 1.66
UBE2E3-209ENST00000602710 YTHDC1Q96MU7 727 aaKnown RBP25.39■■□□□ 1.66
UBE2E3-209ENST00000602710 EYA1Q99502 592 aa25.39■■□□□ 1.66
UBE2E3-209ENST00000602710 SPATA31A6Q5VVP1 1343 aa25.39■■□□□ 1.66
UBE2E3-209ENST00000602710 RGPD1P0DJD0 1748 aa25.39■■□□□ 1.66
UBE2E3-209ENST00000602710 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
UBE2E3-209ENST00000602710 HMOX1P09601 288 aa25.38■■□□□ 1.65
UBE2E3-209ENST00000602710 ERBB3P21860 1342 aa25.37■■□□□ 1.65
UBE2E3-209ENST00000602710 CCDC146Q8IYE0 955 aa25.37■■□□□ 1.65
UBE2E3-209ENST00000602710 COL14A1Q05707 1796 aaKnown RBP25.37■■□□□ 1.65
UBE2E3-209ENST00000602710 LRP6O75581 1613 aa25.36■■□□□ 1.65
UBE2E3-209ENST00000602710 SENP3-EIF4A1A0A087X0R7 540 aa25.35■■□□□ 1.65
UBE2E3-209ENST00000602710 NBPF6Q5VWK0 638 aa25.35■■□□□ 1.65
UBE2E3-209ENST00000602710 AEBP1Q8IUX7 1158 aa25.35■■□□□ 1.65
UBE2E3-209ENST00000602710 NBPF4Q96M43 638 aa25.35■■□□□ 1.65
UBE2E3-209ENST00000602710 IGSF1Q8N6C5 1336 aa25.35■■□□□ 1.65
UBE2E3-209ENST00000602710 SULT6B1Q6IMI4 303 aa25.35■■□□□ 1.65
UBE2E3-209ENST00000602710 BTG4Q9NY30 223 aa25.35■■□□□ 1.65
UBE2E3-209ENST00000602710 COL5A2P05997 1499 aaPredicted RBP25.34■■□□□ 1.65
UBE2E3-209ENST00000602710 USHBP1Q8N6Y0 703 aa25.34■■□□□ 1.65
UBE2E3-209ENST00000602710 RSPH6AQ9H0K4 717 aa25.34■■□□□ 1.65
UBE2E3-209ENST00000602710 CSB-PGBD3P0DP91 1061 aa25.33■■□□□ 1.65
UBE2E3-209ENST00000602710 FCHSD2O94868 740 aa25.32■■□□□ 1.64
UBE2E3-209ENST00000602710 STRN4Q9NRL3 753 aa25.32■■□□□ 1.64
UBE2E3-209ENST00000602710 PLCH1Q4KWH8 1693 aa25.31■■□□□ 1.64
UBE2E3-209ENST00000602710 PRKAR2BP31323 418 aa25.31■■□□□ 1.64
UBE2E3-209ENST00000602710 EVA1CP58658 441 aa25.31■■□□□ 1.64
UBE2E3-209ENST00000602710 PLEKHF1Q96S99 279 aa25.31■■□□□ 1.64
UBE2E3-209ENST00000602710 NLRP2Q9NX02 1062 aa25.31■■□□□ 1.64
UBE2E3-209ENST00000602710 WDR17Q8IZU2 1322 aa25.29■■□□□ 1.64
UBE2E3-209ENST00000602710 HNRNPUQ00839 825 aaKnown RBP eCLIP25.29■■□□□ 1.64
UBE2E3-209ENST00000602710 RUNDC1Q96C34 613 aa25.29■■□□□ 1.64
UBE2E3-209ENST00000602710 C8orf37Q96NL8 207 aa25.29■■□□□ 1.64
UBE2E3-209ENST00000602710 KDRP35968 1356 aa25.28■■□□□ 1.64
UBE2E3-209ENST00000602710 LARP1Q6PKG0 1096 aaKnown RBP25.28■■□□□ 1.64
UBE2E3-209ENST00000602710 NGLY1Q96IV0 654 aa25.27■■□□□ 1.64
UBE2E3-209ENST00000602710 FAM208AQ9UK61 1670 aaKnown RBP25.27■■□□□ 1.64
UBE2E3-209ENST00000602710 TOM1L2Q6ZVM7 507 aa25.27■■□□□ 1.64
UBE2E3-209ENST00000602710 SLIT2O94813 1529 aa25.26■■□□□ 1.63
UBE2E3-209ENST00000602710 APAF1O14727 1248 aa25.26■■□□□ 1.63
UBE2E3-209ENST00000602710 PHACTR3Q96KR7 559 aa25.26■■□□□ 1.63
UBE2E3-209ENST00000602710 PNNQ9H307 717 aaKnown RBP25.26■■□□□ 1.63
UBE2E3-209ENST00000602710 NCAPD2Q15021 1401 aa25.25■■□□□ 1.63
UBE2E3-209ENST00000602710 MEX3CQ5U5Q3 659 aaKnown RBP25.25■■□□□ 1.63
UBE2E3-209ENST00000602710 NRAPQ86VF7 1730 aa25.24■■□□□ 1.63
UBE2E3-209ENST00000602710 TCP11L2Q8N4U5 519 aa25.23■■□□□ 1.63
UBE2E3-209ENST00000602710 NWD2Q9ULI1 1742 aa25.23■■□□□ 1.63
UBE2E3-209ENST00000602710 SALL2Q9Y467 1007 aaPredicted RBP25.22■■□□□ 1.63
UBE2E3-209ENST00000602710 MAPK8IP3Q9UPT6 1336 aa25.22■■□□□ 1.63
UBE2E3-209ENST00000602710 FNBP4Q8N3X1 1017 aaPredicted RBP25.21■■□□□ 1.63
UBE2E3-209ENST00000602710 CARD10Q9BWT7 1032 aa25.21■■□□□ 1.63
UBE2E3-209ENST00000602710 RRP7AQ9Y3A4 280 aaKnown RBP25.21■■□□□ 1.63
UBE2E3-209ENST00000602710 CRB1P82279 1406 aa25.21■■□□□ 1.63
UBE2E3-209ENST00000602710 USP35Q9P2H5 1018 aa25.19■■□□□ 1.62
UBE2E3-209ENST00000602710 BCL9LQ86UU0 1499 aa25.19■■□□□ 1.62
UBE2E3-209ENST00000602710 NEFMP07197 916 aa25.18■■□□□ 1.62
UBE2E3-209ENST00000602710 NEUROD2Q15784 382 aa25.18■■□□□ 1.62
UBE2E3-209ENST00000602710 UNC5CLQ8IV45 518 aa25.18■■□□□ 1.62
UBE2E3-209ENST00000602710 TMPOP42166 694 aaKnown RBP25.17■■□□□ 1.62
UBE2E3-209ENST00000602710 USP21Q9UK80 565 aa25.16■■□□□ 1.62
UBE2E3-209ENST00000602710 AFF2P51816 1311 aa25.15■■□□□ 1.62
UBE2E3-209ENST00000602710 MTHFSDQ2M296 383 aaKnown RBP25.14■■□□□ 1.62
UBE2E3-209ENST00000602710 RAPGEF4Q8WZA2 1011 aa25.14■■□□□ 1.62
UBE2E3-209ENST00000602710 MEGF6O75095 1541 aa25.14■■□□□ 1.62
UBE2E3-209ENST00000602710 NFE2L2Q16236 605 aa25.14■■□□□ 1.61
UBE2E3-209ENST00000602710 SPATA31A1Q5TZJ5 1347 aa25.12■■□□□ 1.61
UBE2E3-209ENST00000602710 TATP17735 454 aaPredicted RBP25.12■■□□□ 1.61
UBE2E3-209ENST00000602710 RIPK4P57078 832 aa25.12■■□□□ 1.61
UBE2E3-209ENST00000602710 CCDC9Q9Y3X0 531 aaKnown RBP25.12■■□□□ 1.61
UBE2E3-209ENST00000602710 SPATA31A5Q5VU36 1347 aa25.11■■□□□ 1.61
UBE2E3-209ENST00000602710 ZBED9Q6R2W3 1325 aa25.11■■□□□ 1.61
UBE2E3-209ENST00000602710 SPATA31A7Q8IWB4 1347 aa25.11■■□□□ 1.61
UBE2E3-209ENST00000602710 DLG5Q8TDM6 1919 aa25.11■■□□□ 1.61
UBE2E3-209ENST00000602710 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms