RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 PPP2R1AP30153 589 aa9.61□□□□□ -0.87
HCG18-244ENST00000602516 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
HCG18-244ENST00000602516 YEATS2Q9ULM3 1422 aa9.61□□□□□ -0.87
HCG18-244ENST00000602516 QRICH2Q9H0J4 1663 aa9.61□□□□□ -0.87
HCG18-244ENST00000602516 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
HCG18-244ENST00000602516 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
HCG18-244ENST00000602516 PWP2Q15269 919 aaKnown RBP9.61□□□□□ -0.87
HCG18-244ENST00000602516 OTUD6BQ8N6M0 293 aa9.61□□□□□ -0.87
HCG18-244ENST00000602516 ZNF500O60304 480 aaPredicted RBP9.6□□□□□ -0.87
HCG18-244ENST00000602516 NBPF9Q3BBW0 867 aa9.6□□□□□ -0.87
HCG18-244ENST00000602516 TAF3Q5VWG9 929 aa9.6□□□□□ -0.87
HCG18-244ENST00000602516 RINLQ6ZS11 566 aa9.6□□□□□ -0.87
HCG18-244ENST00000602516 PREX1Q8TCU6 1659 aa9.6□□□□□ -0.87
HCG18-244ENST00000602516 TSHZ1Q6ZSZ6 1077 aa9.6□□□□□ -0.87
HCG18-244ENST00000602516 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
HCG18-244ENST00000602516 DNAJC14Q6Y2X3 702 aaPredicted RBP9.59□□□□□ -0.87
HCG18-244ENST00000602516 EP400NLQ6ZTU2 488 aa9.59□□□□□ -0.87
HCG18-244ENST00000602516 ZBTB47Q9UFB7 747 aaPredicted RBP9.59□□□□□ -0.87
HCG18-244ENST00000602516 REREQ9P2R6 1566 aa9.59□□□□□ -0.87
HCG18-244ENST00000602516 SENP3-EIF4A1A0A087X0R7 540 aa9.59□□□□□ -0.87
HCG18-244ENST00000602516 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
HCG18-244ENST00000602516 ARHGEF28Q8N1W1 1705 aaKnown RBP9.59□□□□□ -0.87
HCG18-244ENST00000602516 MYO5BQ9ULV0 1848 aa9.58□□□□□ -0.88
HCG18-244ENST00000602516 TMEM131LA2VDJ0 1609 aa9.58□□□□□ -0.88
HCG18-244ENST00000602516 FRAT1Q92837 279 aaPredicted RBP9.58□□□□□ -0.88
HCG18-244ENST00000602516 MAP7D2Q96T17 732 aa9.58□□□□□ -0.88
HCG18-244ENST00000602516 CARD14Q9BXL6 1004 aa9.58□□□□□ -0.88
HCG18-244ENST00000602516 B4GALNT3Q6L9W6 998 aa9.57□□□□□ -0.88
HCG18-244ENST00000602516 ADAMTS8Q9UP79 889 aa9.57□□□□□ -0.88
HCG18-244ENST00000602516 ZSCAN20P17040 1043 aaPredicted RBP9.57□□□□□ -0.88
HCG18-244ENST00000602516 USP32Q8NFA0 1604 aa9.57□□□□□ -0.88
HCG18-244ENST00000602516 CASC1Q6TDU7 716 aa9.57□□□□□ -0.88
HCG18-244ENST00000602516 BORCS6Q96GS4 357 aa9.57□□□□□ -0.88
HCG18-244ENST00000602516 ARID4AP29374 1257 aaPredicted RBP9.56□□□□□ -0.88
HCG18-244ENST00000602516 MAP2K1Q02750 393 aaPredicted RBP9.56□□□□□ -0.88
HCG18-244ENST00000602516 IDI1Q13907 227 aa9.56□□□□□ -0.88
HCG18-244ENST00000602516 AGLP35573 1532 aa9.56□□□□□ -0.88
HCG18-244ENST00000602516 BANK1Q8NDB2 785 aa9.56□□□□□ -0.88
HCG18-244ENST00000602516 RCAN3Q9UKA8 241 aa9.56□□□□□ -0.88
HCG18-244ENST00000602516 TRAK1Q9UPV9 953 aa9.56□□□□□ -0.88
HCG18-244ENST00000602516 ARHGEF40Q8TER5 1519 aa9.55□□□□□ -0.88
HCG18-244ENST00000602516 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
HCG18-244ENST00000602516 RRP1P56182 461 aaKnown RBP9.55□□□□□ -0.88
HCG18-244ENST00000602516 CHADLQ6NUI6 762 aa9.55□□□□□ -0.88
HCG18-244ENST00000602516 RNF217Q8TC41 542 aa9.55□□□□□ -0.88
HCG18-244ENST00000602516 CDCA7LQ96GN5 454 aa9.55□□□□□ -0.88
HCG18-244ENST00000602516 STK26Q9P289 416 aa9.55□□□□□ -0.88
HCG18-244ENST00000602516 SPTY2D1Q68D10 685 aaPredicted RBP9.55□□□□□ -0.88
HCG18-244ENST00000602516 ZNF521Q96K83 1311 aa9.55□□□□□ -0.88
HCG18-244ENST00000602516 TMEM132EQ6IEE7 984 aa9.54□□□□□ -0.88
HCG18-244ENST00000602516 NBPF10Q6P3W6 841 aaKnown RBP9.54□□□□□ -0.88
HCG18-244ENST00000602516 ANP32AP39687 249 aaKnown RBP9.53□□□□□ -0.88
HCG18-244ENST00000602516 WDR43Q15061 677 aaKnown RBP eCLIP9.53□□□□□ -0.88
HCG18-244ENST00000602516 ARMCX6Q7L4S7 300 aa9.53□□□□□ -0.88
HCG18-244ENST00000602516 RIPOR2Q9Y4F9 1068 aa9.53□□□□□ -0.88
HCG18-244ENST00000602516 TULP4Q9NRJ4 1543 aa9.53□□□□□ -0.88
HCG18-244ENST00000602516 LETM1O95202 739 aaPredicted RBP9.53□□□□□ -0.88
HCG18-244ENST00000602516 BRD1O95696 1058 aa9.53□□□□□ -0.88
HCG18-244ENST00000602516 PLEKHH1Q9ULM0 1364 aa9.53□□□□□ -0.88
HCG18-244ENST00000602516 GOLIM4O00461 696 aa9.53□□□□□ -0.88
HCG18-244ENST00000602516 REM2Q8IYK8 340 aaPredicted RBP9.53□□□□□ -0.88
HCG18-244ENST00000602516 TERF2IPQ9NYB0 399 aa9.53□□□□□ -0.88
HCG18-244ENST00000602516 ZNF513Q8N8E2 541 aaPredicted RBP9.52□□□□□ -0.89
HCG18-244ENST00000602516 GTPBP4Q9BZE4 634 aaKnown RBP9.52□□□□□ -0.89
HCG18-244ENST00000602516 POLR3AO14802 1390 aaPredicted RBP9.52□□□□□ -0.89
HCG18-244ENST00000602516 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
HCG18-244ENST00000602516 SATB1Q01826 763 aa9.52□□□□□ -0.89
HCG18-244ENST00000602516 NSD3Q9BZ95 1437 aa9.52□□□□□ -0.89
HCG18-244ENST00000602516 SHPRHQ149N8 1683 aa9.51□□□□□ -0.89
HCG18-244ENST00000602516 RAI14Q9P0K7 980 aa9.51□□□□□ -0.89
HCG18-244ENST00000602516 SLC12A5Q9H2X9 1139 aa9.51□□□□□ -0.89
HCG18-244ENST00000602516 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
HCG18-244ENST00000602516 EVC2Q86UK5 1308 aa9.5□□□□□ -0.89
HCG18-244ENST00000602516 SPATA31D1Q6ZQQ2 1576 aa9.5□□□□□ -0.89
HCG18-244ENST00000602516 PTPRMP28827 1452 aa9.5□□□□□ -0.89
HCG18-244ENST00000602516 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
HCG18-244ENST00000602516 DCAF8Q5TAQ9 597 aa9.5□□□□□ -0.89
HCG18-244ENST00000602516 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
HCG18-244ENST00000602516 RASEFQ8IZ41 740 aa9.5□□□□□ -0.89
HCG18-244ENST00000602516 MYBPC2Q14324 1141 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 DUSP27Q5VZP5 1158 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 TRMT2AQ8IZ69 625 aaKnown RBP9.49□□□□□ -0.89
HCG18-244ENST00000602516 ANKRD36BQ8N2N9 1353 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 NBPF6Q5VWK0 638 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 NBPF5PQ86XG9 351 aaPredicted RBP9.49□□□□□ -0.89
HCG18-244ENST00000602516 NBPF4Q96M43 638 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 KDM4FA0A1W2PPD8 638 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 POLD1P28340 1107 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
HCG18-244ENST00000602516 ALKQ9UM73 1620 aa9.49□□□□□ -0.89
HCG18-244ENST00000602516 NINLQ9Y2I6 1382 aa9.48□□□□□ -0.89
HCG18-244ENST00000602516 GOLGA2Q08379 1002 aa9.48□□□□□ -0.89
HCG18-244ENST00000602516 NME8Q8N427 588 aa9.48□□□□□ -0.89
HCG18-244ENST00000602516 EXOC6Q8TAG9 804 aa9.48□□□□□ -0.89
HCG18-244ENST00000602516 ZBTB9Q96C00 473 aa9.48□□□□□ -0.89
HCG18-244ENST00000602516 CREBZFQ9NS37 354 aa9.48□□□□□ -0.89
HCG18-244ENST00000602516 NSD2O96028 1365 aa9.48□□□□□ -0.89
HCG18-244ENST00000602516 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
HCG18-244ENST00000602516 SETD1AO15047 1707 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms