RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 TRPM3Q9HCF6 1732 aaPredicted RBP12.11□□□□□ -0.47
DDX49-211ENST00000601772 ALS2Q96Q42 1657 aa12.11□□□□□ -0.47
DDX49-211ENST00000601772 APLP1P51693 650 aa12.11□□□□□ -0.47
DDX49-211ENST00000601772 PTF1AQ7RTS3 328 aa12.11□□□□□ -0.47
DDX49-211ENST00000601772 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
DDX49-211ENST00000601772 EIF3AQ14152 1382 aaKnown RBP12.1□□□□□ -0.47
DDX49-211ENST00000601772 TONSLQ96HA7 1378 aa12.1□□□□□ -0.47
DDX49-211ENST00000601772 PAK3O75914 559 aaPredicted RBP12.1□□□□□ -0.47
DDX49-211ENST00000601772 PROM2Q8N271 834 aa12.1□□□□□ -0.47
DDX49-211ENST00000601772 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
DDX49-211ENST00000601772 CRYBG1Q9Y4K1 1723 aa12.09□□□□□ -0.47
DDX49-211ENST00000601772 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
DDX49-211ENST00000601772 WASLO00401 505 aaPredicted RBP12.09□□□□□ -0.47
DDX49-211ENST00000601772 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
DDX49-211ENST00000601772 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
DDX49-211ENST00000601772 PRR36Q9H6K5 1346 aa12.09□□□□□ -0.47
DDX49-211ENST00000601772 ATP7BP35670 1465 aa12.08□□□□□ -0.47
DDX49-211ENST00000601772 C11orf95C9JLR9 678 aaPredicted RBP12.08□□□□□ -0.48
DDX49-211ENST00000601772 ZC3H6P61129 1189 aaKnown RBP12.08□□□□□ -0.48
DDX49-211ENST00000601772 NLGN2Q8NFZ4 835 aa12.08□□□□□ -0.48
DDX49-211ENST00000601772 ROCK2O75116 1388 aaKnown RBP12.07□□□□□ -0.48
DDX49-211ENST00000601772 GRIN3BO60391 1043 aa12.07□□□□□ -0.48
DDX49-211ENST00000601772 YBX3P16989 372 aaKnown RBP eCLIP12.07□□□□□ -0.482e-6■□□□□ 8.6
DDX49-211ENST00000601772 TXNRD1Q16881 649 aa12.07□□□□□ -0.48
DDX49-211ENST00000601772 PEAK1Q9H792 1746 aa12.07□□□□□ -0.48
DDX49-211ENST00000601772 PARP4Q9UKK3 1724 aaKnown RBP12.07□□□□□ -0.48
DDX49-211ENST00000601772 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
DDX49-211ENST00000601772 PCDH10Q9P2E7 1040 aa12.06□□□□□ -0.48
DDX49-211ENST00000601772 DNAJC5GQ8N7S2 189 aa12.05□□□□□ -0.48
DDX49-211ENST00000601772 CDK19Q9BWU1 502 aa12.05□□□□□ -0.48
DDX49-211ENST00000601772 POLD1P28340 1107 aa12.04□□□□□ -0.48
DDX49-211ENST00000601772 NUDT16Q96DE0 195 aaKnown RBP12.04□□□□□ -0.48
DDX49-211ENST00000601772 TIMELESSQ9UNS1 1208 aa12.04□□□□□ -0.48
DDX49-211ENST00000601772 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
DDX49-211ENST00000601772 MIER1Q8N108 512 aa12.03□□□□□ -0.48
DDX49-211ENST00000601772 WWC3Q9ULE0 1092 aa12.03□□□□□ -0.48
DDX49-211ENST00000601772 THRAP3Q9Y2W1 955 aaKnown RBP12.03□□□□□ -0.48
DDX49-211ENST00000601772 LRRC37A3O60309 1634 aa12.03□□□□□ -0.48
DDX49-211ENST00000601772 AKAP12Q02952 1782 aa12.02□□□□□ -0.48
DDX49-211ENST00000601772 NUTM2GQ5VZR2 741 aa12.02□□□□□ -0.49
DDX49-211ENST00000601772 DDB1Q16531 1140 aa12.01□□□□□ -0.49
DDX49-211ENST00000601772 ADCY9O60503 1353 aa12.01□□□□□ -0.49
DDX49-211ENST00000601772 KIF3CO14782 793 aa12□□□□□ -0.49
DDX49-211ENST00000601772 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
DDX49-211ENST00000601772 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
DDX49-211ENST00000601772 CARD11Q9BXL7 1154 aa12□□□□□ -0.49
DDX49-211ENST00000601772 WDR90Q96KV7 1748 aa12□□□□□ -0.49
DDX49-211ENST00000601772 HTRA3P83110 453 aa11.99□□□□□ -0.49
DDX49-211ENST00000601772 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
DDX49-211ENST00000601772 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
DDX49-211ENST00000601772 PPIP5K1Q6PFW1 1433 aa11.99□□□□□ -0.49
DDX49-211ENST00000601772 POLR3AO14802 1390 aaPredicted RBP11.98□□□□□ -0.49
DDX49-211ENST00000601772 ACEP12821 1306 aa11.98□□□□□ -0.49
DDX49-211ENST00000601772 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
DDX49-211ENST00000601772 KLRG1Q96E93 195 aa11.98□□□□□ -0.49
DDX49-211ENST00000601772 MON2Q7Z3U7 1717 aa11.97□□□□□ -0.49
DDX49-211ENST00000601772 EVC2Q86UK5 1308 aa11.97□□□□□ -0.49
DDX49-211ENST00000601772 ZBTB7CA1YPR0 619 aa11.97□□□□□ -0.49
DDX49-211ENST00000601772 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
DDX49-211ENST00000601772 AATKQ6ZMQ8 1374 aa11.96□□□□□ -0.49
DDX49-211ENST00000601772 SBNO2Q9Y2G9 1366 aa11.96□□□□□ -0.49
DDX49-211ENST00000601772 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.49
DDX49-211ENST00000601772 JMYQ8N9B5 988 aa11.96□□□□□ -0.49
DDX49-211ENST00000601772 MARCH10Q8NA82 808 aaPredicted RBP11.96□□□□□ -0.49
DDX49-211ENST00000601772 LMO7Q8WWI1 1683 aa11.96□□□□□ -0.5
DDX49-211ENST00000601772 CRB1P82279 1406 aa11.95□□□□□ -0.5
DDX49-211ENST00000601772 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
DDX49-211ENST00000601772 PIK3C2AO00443 1686 aa11.94□□□□□ -0.5
DDX49-211ENST00000601772 PCNTO95613 3336 aa11.94□□□□□ -0.5
DDX49-211ENST00000601772 TOMM70O94826 608 aa11.93□□□□□ -0.5
DDX49-211ENST00000601772 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
DDX49-211ENST00000601772 CABP1Q9NZU7 370 aa11.93□□□□□ -0.5
DDX49-211ENST00000601772 USP6P35125 1406 aa11.92□□□□□ -0.5
DDX49-211ENST00000601772 TOM1L2Q6ZVM7 507 aa11.91□□□□□ -0.5
DDX49-211ENST00000601772 ACSBG1Q96GR2 724 aa11.91□□□□□ -0.5
DDX49-211ENST00000601772 BCL9O00512 1426 aa11.91□□□□□ -0.5
DDX49-211ENST00000601772 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
DDX49-211ENST00000601772 WNK3Q9BYP7 1800 aa11.9□□□□□ -0.5
DDX49-211ENST00000601772 ST20-MTHFSA0A0A6YYL1 179 aa11.9□□□□□ -0.5
DDX49-211ENST00000601772 HSPA1AP0DMV8 641 aaKnown RBP11.9□□□□□ -0.5
DDX49-211ENST00000601772 HSPA1BP0DMV9 641 aaKnown RBP11.9□□□□□ -0.5
DDX49-211ENST00000601772 CPDO75976 1380 aa11.9□□□□□ -0.5
DDX49-211ENST00000601772 USP47Q96K76 1375 aa11.9□□□□□ -0.5
DDX49-211ENST00000601772 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
DDX49-211ENST00000601772 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
DDX49-211ENST00000601772 CPSF1Q10570 1443 aaKnown RBP11.89□□□□□ -0.51
DDX49-211ENST00000601772 MSH5O43196 834 aa11.89□□□□□ -0.51
DDX49-211ENST00000601772 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
DDX49-211ENST00000601772 TFCP2L1Q9NZI6 479 aa11.89□□□□□ -0.51
DDX49-211ENST00000601772 USP54Q70EL1 1684 aa11.89□□□□□ -0.51
DDX49-211ENST00000601772 RGPD5Q99666 1765 aa11.89□□□□□ -0.51
DDX49-211ENST00000601772 NHSQ6T4R5 1651 aa11.88□□□□□ -0.51
DDX49-211ENST00000601772 SLIT3O75094 1523 aa11.88□□□□□ -0.51
DDX49-211ENST00000601772 FAM161AQ3B820 660 aa11.88□□□□□ -0.51
DDX49-211ENST00000601772 YTHDC1Q96MU7 727 aaKnown RBP11.88□□□□□ -0.51
DDX49-211ENST00000601772 TESK2Q96S53 571 aa11.88□□□□□ -0.51
DDX49-211ENST00000601772 LRRC4BQ9NT99 713 aa11.88□□□□□ -0.51
DDX49-211ENST00000601772 CD163L1Q9NR16 1453 aa11.88□□□□□ -0.51
DDX49-211ENST00000601772 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
DDX49-211ENST00000601772 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms