RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 AATKQ6ZMQ8 1374 aa19.74■□□□□ 0.75
USE1-210ENST00000601662 GGNBP2Q9H3C7 697 aa19.74■□□□□ 0.75
USE1-210ENST00000601662 KNSTRNQ9Y448 316 aa19.74■□□□□ 0.75
USE1-210ENST00000601662 SPATA31A1Q5TZJ5 1347 aa19.74■□□□□ 0.75
USE1-210ENST00000601662 ONECUT3O60422 494 aaPredicted RBP19.73■□□□□ 0.75
USE1-210ENST00000601662 CARD14Q9BXL6 1004 aa19.73■□□□□ 0.75
USE1-210ENST00000601662 FYB1O15117 783 aa19.72■□□□□ 0.75
USE1-210ENST00000601662 CSB-PGBD3P0DP91 1061 aa19.72■□□□□ 0.75
USE1-210ENST00000601662 PER1O15534 1290 aaPredicted RBP19.71■□□□□ 0.75
USE1-210ENST00000601662 FBLN1P23142 703 aa19.71■□□□□ 0.75
USE1-210ENST00000601662 TOM1L2Q6ZVM7 507 aa19.71■□□□□ 0.75
USE1-210ENST00000601662 MYOM1P52179 1685 aa19.71■□□□□ 0.75
USE1-210ENST00000601662 LMO7Q8WWI1 1683 aa19.7■□□□□ 0.74
USE1-210ENST00000601662 NFAT5O94916 1531 aa19.7■□□□□ 0.74
USE1-210ENST00000601662 OVOS2A0A0J9YW53 1432 aa19.69■□□□□ 0.74
USE1-210ENST00000601662 OVOS2Q6IE36 1432 aa19.69■□□□□ 0.74
USE1-210ENST00000601662 COL5A2P05997 1499 aaPredicted RBP19.69■□□□□ 0.74
USE1-210ENST00000601662 KRT27Q7Z3Y8 459 aa19.69■□□□□ 0.74
USE1-210ENST00000601662 TCP11L2Q8N4U5 519 aa19.69■□□□□ 0.74
USE1-210ENST00000601662 NSD3Q9BZ95 1437 aa19.68■□□□□ 0.74
USE1-210ENST00000601662 COL18A1P39060 1754 aa19.66■□□□□ 0.74
USE1-210ENST00000601662 FAM182BQ5T319 152 aa19.66■□□□□ 0.74
USE1-210ENST00000601662 BRWD3Q6RI45 1802 aa19.66■□□□□ 0.74
USE1-210ENST00000601662 CGNL1Q0VF96 1302 aa19.66■□□□□ 0.74
USE1-210ENST00000601662 AMPHP49418 695 aa19.65■□□□□ 0.74
USE1-210ENST00000601662 LTV1Q96GA3 475 aaPredicted RBP19.65■□□□□ 0.74
USE1-210ENST00000601662 WDR17Q8IZU2 1322 aa19.65■□□□□ 0.74
USE1-210ENST00000601662 CRB1P82279 1406 aa19.65■□□□□ 0.74
USE1-210ENST00000601662 ANP32CO43423 234 aa19.64■□□□□ 0.73
USE1-210ENST00000601662 RRS1Q15050 365 aaKnown RBP19.64■□□□□ 0.73
USE1-210ENST00000601662 BARGINQ6ZT62 677 aa19.64■□□□□ 0.73
USE1-210ENST00000601662 NPC1L1Q9UHC9 1359 aa19.64■□□□□ 0.73
USE1-210ENST00000601662 USP54Q70EL1 1684 aa19.64■□□□□ 0.73
USE1-210ENST00000601662 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
USE1-210ENST00000601662 MAP3K19Q56UN5 1328 aa19.63■□□□□ 0.73
USE1-210ENST00000601662 NLRP2Q9NX02 1062 aa19.63■□□□□ 0.73
USE1-210ENST00000601662 ANKRD24Q8TF21 1146 aa19.62■□□□□ 0.73
USE1-210ENST00000601662 IP6K1Q92551 441 aa19.62■□□□□ 0.73
USE1-210ENST00000601662 THRAP3Q9Y2W1 955 aaKnown RBP19.62■□□□□ 0.73
USE1-210ENST00000601662 PDE3BQ13370 1112 aa19.61■□□□□ 0.73
USE1-210ENST00000601662 AMER1Q5JTC6 1135 aaPredicted RBP19.61■□□□□ 0.73
USE1-210ENST00000601662 LTN1O94822 1766 aa19.61■□□□□ 0.73
USE1-210ENST00000601662 CARD10Q9BWT7 1032 aa19.6■□□□□ 0.73
USE1-210ENST00000601662 NSD2O96028 1365 aa19.59■□□□□ 0.73
USE1-210ENST00000601662 ERBB3P21860 1342 aa19.59■□□□□ 0.73
USE1-210ENST00000601662 HOXC9P31274 260 aa19.59■□□□□ 0.73
USE1-210ENST00000601662 TNNT2P45379 298 aaPredicted RBP19.59■□□□□ 0.73
USE1-210ENST00000601662 RALBP1Q15311 655 aa19.59■□□□□ 0.73
USE1-210ENST00000601662 KIF20BQ96Q89 1820 aa19.58■□□□□ 0.73
USE1-210ENST00000601662 THSD7AQ9UPZ6 1657 aa19.58■□□□□ 0.72
USE1-210ENST00000601662 PPM1GO15355 546 aaPredicted RBP19.57■□□□□ 0.72
USE1-210ENST00000601662 CC2D1BQ5T0F9 858 aaKnown RBP19.57■□□□□ 0.72
USE1-210ENST00000601662 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
USE1-210ENST00000601662 DDB1Q16531 1140 aa19.56■□□□□ 0.72
USE1-210ENST00000601662 CCDC125Q86Z20 511 aa19.55■□□□□ 0.72
USE1-210ENST00000601662 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
USE1-210ENST00000601662 EMILIN1Q9Y6C2 1016 aa19.55■□□□□ 0.72
USE1-210ENST00000601662 ABCC6O95255 1503 aa19.55■□□□□ 0.72
USE1-210ENST00000601662 EP400Q96L91 3159 aa19.54■□□□□ 0.72
USE1-210ENST00000601662 BLMP54132 1417 aaPredicted RBP19.54■□□□□ 0.72
USE1-210ENST00000601662 MORC1Q86VD1 984 aa19.54■□□□□ 0.72
USE1-210ENST00000601662 HSP90AB2PQ58FF8 381 aa19.53■□□□□ 0.72
USE1-210ENST00000601662 CDCA7Q9BWT1 371 aaPredicted RBP19.53■□□□□ 0.72
USE1-210ENST00000601662 CNGB1Q14028 1251 aaPredicted RBP19.52■□□□□ 0.72
USE1-210ENST00000601662 FAM196AQ6ZSG2 479 aa19.52■□□□□ 0.72
USE1-210ENST00000601662 DEFB132Q7Z7B7 95 aa19.52■□□□□ 0.72
USE1-210ENST00000601662 EXOC5O00471 708 aa19.51■□□□□ 0.71
USE1-210ENST00000601662 TRIM37O94972 964 aa19.51■□□□□ 0.71
USE1-210ENST00000601662 RTL1A6NKG5 1358 aa19.5■□□□□ 0.71
USE1-210ENST00000601662 PARD3Q8TEW0 1356 aa19.5■□□□□ 0.71
USE1-210ENST00000601662 IL2RBP14784 551 aa19.5■□□□□ 0.71
USE1-210ENST00000601662 FLT4P35916 1363 aa19.48■□□□□ 0.71
USE1-210ENST00000601662 NBPF6Q5VWK0 638 aa19.48■□□□□ 0.71
USE1-210ENST00000601662 MIER1Q8N108 512 aa19.48■□□□□ 0.71
USE1-210ENST00000601662 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
USE1-210ENST00000601662 NBPF4Q96M43 638 aa19.48■□□□□ 0.71
USE1-210ENST00000601662 POLKQ9UBT6 870 aa19.48■□□□□ 0.71
USE1-210ENST00000601662 MARCH10Q8NA82 808 aaPredicted RBP19.47■□□□□ 0.71
USE1-210ENST00000601662 DISP2A7MBM2 1401 aa19.47■□□□□ 0.71
USE1-210ENST00000601662 PARP4Q9UKK3 1724 aaKnown RBP19.47■□□□□ 0.71
USE1-210ENST00000601662 MYBBP1AQ9BQG0 1328 aaKnown RBP19.47■□□□□ 0.71
USE1-210ENST00000601662 INSRP06213 1382 aa19.46■□□□□ 0.71
USE1-210ENST00000601662 SMG6Q86US8 1419 aaKnown RBP19.46■□□□□ 0.71
USE1-210ENST00000601662 BAG6P46379 1132 aa19.45■□□□□ 0.7
USE1-210ENST00000601662 PEAK1Q9H792 1746 aa19.45■□□□□ 0.7
USE1-210ENST00000601662 KIF24Q5T7B8 1368 aa19.44■□□□□ 0.7
USE1-210ENST00000601662 MAP2P11137 1827 aaKnown RBP19.44■□□□□ 0.7
USE1-210ENST00000601662 LRRC37A3O60309 1634 aa19.44■□□□□ 0.7
USE1-210ENST00000601662 CCER2I3L3R5 266 aa19.44■□□□□ 0.7
USE1-210ENST00000601662 APBA3O96018 575 aa19.44■□□□□ 0.7
USE1-210ENST00000601662 PPP2R1AP30153 589 aa19.43■□□□□ 0.7
USE1-210ENST00000601662 EN1Q05925 392 aaPredicted RBP19.43■□□□□ 0.7
USE1-210ENST00000601662 WNK3Q9BYP7 1800 aa19.43■□□□□ 0.7
USE1-210ENST00000601662 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
USE1-210ENST00000601662 RGPD2P0DJD1 1756 aa19.42■□□□□ 0.7
USE1-210ENST00000601662 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
USE1-210ENST00000601662 ANKRD26Q9UPS8 1709 aa19.42■□□□□ 0.7
USE1-210ENST00000601662 RAPGEF4Q8WZA2 1011 aa19.4■□□□□ 0.7
USE1-210ENST00000601662 TNS2Q63HR2 1409 aa19.4■□□□□ 0.7
USE1-210ENST00000601662 FAM208AQ9UK61 1670 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms