RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 AATKQ6ZMQ8 1374 aa23.46■■□□□ 1.35
SSBP4-211ENST00000601614 BCL11BQ9C0K0 894 aaPredicted RBP23.46■■□□□ 1.35
SSBP4-211ENST00000601614 UTRNP46939 3433 aa23.44■■□□□ 1.34
SSBP4-211ENST00000601614 CHD4Q14839 1912 aa23.44■■□□□ 1.34
SSBP4-211ENST00000601614 NBPF1Q3BBV0 1214 aa23.44■■□□□ 1.34
SSBP4-211ENST00000601614 MARCH10Q8NA82 808 aaPredicted RBP23.44■■□□□ 1.34
SSBP4-211ENST00000601614 ZNF784Q8NCA9 323 aaPredicted RBP23.44■■□□□ 1.34
SSBP4-211ENST00000601614 USP6P35125 1406 aa23.43■■□□□ 1.34
SSBP4-211ENST00000601614 CABP2Q9NPB3 220 aa23.43■■□□□ 1.34
SSBP4-211ENST00000601614 QRICH2Q9H0J4 1663 aa23.42■■□□□ 1.34
SSBP4-211ENST00000601614 SRPK2P78362 688 aaKnown RBP23.42■■□□□ 1.34
SSBP4-211ENST00000601614 TOM1L2Q6ZVM7 507 aa23.42■■□□□ 1.34
SSBP4-211ENST00000601614 ATF5Q9Y2D1 282 aaPredicted RBP23.42■■□□□ 1.34
SSBP4-211ENST00000601614 AXIN2Q9Y2T1 843 aa23.42■■□□□ 1.34
SSBP4-211ENST00000601614 BCL9O00512 1426 aa23.42■■□□□ 1.34
SSBP4-211ENST00000601614 NLRP6P59044 892 aa23.4■■□□□ 1.34
SSBP4-211ENST00000601614 BRD4O60885 1362 aaPredicted RBP23.4■■□□□ 1.34
SSBP4-211ENST00000601614 WDR17Q8IZU2 1322 aa23.39■■□□□ 1.34
SSBP4-211ENST00000601614 TXNRD1Q16881 649 aa23.38■■□□□ 1.33
SSBP4-211ENST00000601614 FHDC1Q9C0D6 1143 aaPredicted RBP23.38■■□□□ 1.33
SSBP4-211ENST00000601614 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
SSBP4-211ENST00000601614 SYT17Q9BSW7 474 aa23.37■■□□□ 1.33
SSBP4-211ENST00000601614 CABP1Q9NZU7 370 aa23.37■■□□□ 1.33
SSBP4-211ENST00000601614 SGIP1Q9BQI5 828 aa23.36■■□□□ 1.33
SSBP4-211ENST00000601614 CENPJQ9HC77 1338 aaPredicted RBP23.35■■□□□ 1.33
SSBP4-211ENST00000601614 SLC15A2Q16348 729 aa23.35■■□□□ 1.33
SSBP4-211ENST00000601614 STK32BQ9NY57 414 aa23.34■■□□□ 1.33
SSBP4-211ENST00000601614 NHSQ6T4R5 1651 aa23.34■■□□□ 1.33
SSBP4-211ENST00000601614 PAPPAQ13219 1627 aa23.33■■□□□ 1.33
SSBP4-211ENST00000601614 ARHGEF25Q86VW2 580 aa23.32■■□□□ 1.32
SSBP4-211ENST00000601614 TRPM1Q7Z4N2 1603 aa23.32■■□□□ 1.32
SSBP4-211ENST00000601614 CDCA7Q9BWT1 371 aaPredicted RBP23.31■■□□□ 1.32
SSBP4-211ENST00000601614 CARD10Q9BWT7 1032 aa23.3■■□□□ 1.32
SSBP4-211ENST00000601614 MTFR1LQ9H019 292 aa23.3■■□□□ 1.32
SSBP4-211ENST00000601614 NFAT5O94916 1531 aa23.29■■□□□ 1.32
SSBP4-211ENST00000601614 TNS2Q63HR2 1409 aa23.28■■□□□ 1.32
SSBP4-211ENST00000601614 BTAF1O14981 1849 aa23.28■■□□□ 1.32
SSBP4-211ENST00000601614 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
SSBP4-211ENST00000601614 SOX12O15370 315 aa23.27■■□□□ 1.32
SSBP4-211ENST00000601614 EXOC5O00471 708 aa23.26■■□□□ 1.31
SSBP4-211ENST00000601614 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
SSBP4-211ENST00000601614 TTC21BQ7Z4L5 1316 aa23.26■■□□□ 1.31
SSBP4-211ENST00000601614 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
SSBP4-211ENST00000601614 C1QTNF8P60827 252 aa23.25■■□□□ 1.31
SSBP4-211ENST00000601614 ACSBG1Q96GR2 724 aa23.24■■□□□ 1.31
SSBP4-211ENST00000601614 ABCC6O95255 1503 aa23.23■■□□□ 1.31
SSBP4-211ENST00000601614 ARXQ96QS3 562 aa23.23■■□□□ 1.31
SSBP4-211ENST00000601614 CCDC7Q96M83 1385 aa23.23■■□□□ 1.31
SSBP4-211ENST00000601614 KCNH5Q8NCM2 988 aa23.22■■□□□ 1.31
SSBP4-211ENST00000601614 MAP3K5Q99683 1374 aa23.22■■□□□ 1.31
SSBP4-211ENST00000601614 ZNF827Q17R98 1081 aa23.21■■□□□ 1.31
SSBP4-211ENST00000601614 COL24A1Q17RW2 1714 aa23.2■■□□□ 1.3
SSBP4-211ENST00000601614 MON2Q7Z3U7 1717 aa23.2■■□□□ 1.3
SSBP4-211ENST00000601614 TUBGCP6Q96RT7 1819 aa23.19■■□□□ 1.3
SSBP4-211ENST00000601614 LTN1O94822 1766 aa23.19■■□□□ 1.3
SSBP4-211ENST00000601614 QSER1Q2KHR3 1735 aa23.19■■□□□ 1.3
SSBP4-211ENST00000601614 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
SSBP4-211ENST00000601614 LRRC4BQ9NT99 713 aa23.18■■□□□ 1.3
SSBP4-211ENST00000601614 TTC21AQ8NDW8 1320 aa23.17■■□□□ 1.3
SSBP4-211ENST00000601614 USP54Q70EL1 1684 aa23.17■■□□□ 1.3
SSBP4-211ENST00000601614 ZNF692Q9BU19 519 aaPredicted RBP23.16■■□□□ 1.3
SSBP4-211ENST00000601614 ERBB3P21860 1342 aa23.14■■□□□ 1.3
SSBP4-211ENST00000601614 SHANK3Q9BYB0 1731 aa23.14■■□□□ 1.3
SSBP4-211ENST00000601614 GPR162Q16538 588 aa23.12■■□□□ 1.29
SSBP4-211ENST00000601614 KTN1Q86UP2 1357 aaKnown RBP23.12■■□□□ 1.29
SSBP4-211ENST00000601614 AKT1S1Q96B36 256 aa23.11■■□□□ 1.29
SSBP4-211ENST00000601614 NLRP2Q9NX02 1062 aa23.11■■□□□ 1.29
SSBP4-211ENST00000601614 IL2RBP14784 551 aa23.1■■□□□ 1.29
SSBP4-211ENST00000601614 KLHL34Q8N239 644 aa23.09■■□□□ 1.29
SSBP4-211ENST00000601614 USP31Q70CQ4 1352 aa23.09■■□□□ 1.29
SSBP4-211ENST00000601614 GOLGB1Q14789 3259 aaKnown RBP23.09■■□□□ 1.29
SSBP4-211ENST00000601614 L3MBTL2Q969R5 705 aa23.08■■□□□ 1.29
SSBP4-211ENST00000601614 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.28
SSBP4-211ENST00000601614 CD163L1Q9NR16 1453 aa23.07■■□□□ 1.28
SSBP4-211ENST00000601614 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.07■■□□□ 1.28
SSBP4-211ENST00000601614 LY75O60449 1722 aa23.07■■□□□ 1.28
SSBP4-211ENST00000601614 GIGYF1O75420 1035 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-211ENST00000601614 NME9Q86XW9 330 aa23.06■■□□□ 1.28
SSBP4-211ENST00000601614 NLGN2Q8NFZ4 835 aa23.06■■□□□ 1.28
SSBP4-211ENST00000601614 DOT1LQ8TEK3 1739 aa23.05■■□□□ 1.28
SSBP4-211ENST00000601614 KCNQ4P56696 695 aa23.05■■□□□ 1.28
SSBP4-211ENST00000601614 IFFO2Q5TF58 517 aa23.05■■□□□ 1.28
SSBP4-211ENST00000601614 ANKRD24Q8TF21 1146 aa23.05■■□□□ 1.28
SSBP4-211ENST00000601614 SLC16A10Q8TF71 515 aa23.05■■□□□ 1.28
SSBP4-211ENST00000601614 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
SSBP4-211ENST00000601614 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
SSBP4-211ENST00000601614 POLD1P28340 1107 aa23.01■■□□□ 1.27
SSBP4-211ENST00000601614 SLC27A3Q5K4L6 730 aa23.01■■□□□ 1.27
SSBP4-211ENST00000601614 RGPD2P0DJD1 1756 aa23.01■■□□□ 1.27
SSBP4-211ENST00000601614 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
SSBP4-211ENST00000601614 FAM208AQ9UK61 1670 aaKnown RBP23■■□□□ 1.27
SSBP4-211ENST00000601614 YBX3P16989 372 aaKnown RBP eCLIP23■■□□□ 1.27
SSBP4-211ENST00000601614 DDX54Q8TDD1 881 aaKnown RBP22.99■■□□□ 1.27
SSBP4-211ENST00000601614 NSD2O96028 1365 aa22.99■■□□□ 1.27
SSBP4-211ENST00000601614 CEP350Q5VT06 3117 aa22.98■■□□□ 1.27
SSBP4-211ENST00000601614 TFCP2L1Q9NZI6 479 aa22.97■■□□□ 1.27
SSBP4-211ENST00000601614 PRIM1P49642 420 aaKnown RBP22.95■■□□□ 1.26
SSBP4-211ENST00000601614 SIN3AQ96ST3 1273 aa22.95■■□□□ 1.26
SSBP4-211ENST00000601614 ANKRD36BQ8N2N9 1353 aa22.94■■□□□ 1.26
SSBP4-211ENST00000601614 SYTL4Q96C24 671 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms