RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 SPON1Q9HCB6 807 aa11.93□□□□□ -0.5
CCDC9-206ENST00000601154 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
CCDC9-206ENST00000601154 TRPM1Q7Z4N2 1603 aa11.93□□□□□ -0.5
CCDC9-206ENST00000601154 PEAK1Q9H792 1746 aa11.92□□□□□ -0.5
CCDC9-206ENST00000601154 C11orf95C9JLR9 678 aaPredicted RBP11.92□□□□□ -0.5
CCDC9-206ENST00000601154 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
CCDC9-206ENST00000601154 MARCH10Q8NA82 808 aaPredicted RBP11.92□□□□□ -0.5
CCDC9-206ENST00000601154 KCNH5Q8NCM2 988 aa11.92□□□□□ -0.5
CCDC9-206ENST00000601154 KTN1Q86UP2 1357 aaKnown RBP11.92□□□□□ -0.5
CCDC9-206ENST00000601154 KCNQ2O43526 872 aa11.91□□□□□ -0.5
CCDC9-206ENST00000601154 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
CCDC9-206ENST00000601154 TTC21AQ8NDW8 1320 aa11.9□□□□□ -0.5
CCDC9-206ENST00000601154 COL18A1P39060 1754 aa11.9□□□□□ -0.5
CCDC9-206ENST00000601154 PLSCR1O15162 318 aa11.9□□□□□ -0.5
CCDC9-206ENST00000601154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC9-206ENST00000601154 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
CCDC9-206ENST00000601154 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
CCDC9-206ENST00000601154 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
CCDC9-206ENST00000601154 YY1P25490 414 aa11.89□□□□□ -0.51
CCDC9-206ENST00000601154 CARD10Q9BWT7 1032 aa11.89□□□□□ -0.51
CCDC9-206ENST00000601154 NFAT5O94916 1531 aa11.89□□□□□ -0.51
CCDC9-206ENST00000601154 ZBTB7AO95365 584 aa11.88□□□□□ -0.51
CCDC9-206ENST00000601154 PROM2Q8N271 834 aa11.88□□□□□ -0.51
CCDC9-206ENST00000601154 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
CCDC9-206ENST00000601154 EXOC5O00471 708 aa11.87□□□□□ -0.51
CCDC9-206ENST00000601154 TXNRD1Q16881 649 aa11.87□□□□□ -0.51
CCDC9-206ENST00000601154 NME9Q86XW9 330 aa11.87□□□□□ -0.51
CCDC9-206ENST00000601154 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
CCDC9-206ENST00000601154 ACSBG1Q96GR2 724 aa11.87□□□□□ -0.51
CCDC9-206ENST00000601154 CCDC7Q96M83 1385 aa11.87□□□□□ -0.51
CCDC9-206ENST00000601154 NINLQ9Y2I6 1382 aa11.87□□□□□ -0.51
CCDC9-206ENST00000601154 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
CCDC9-206ENST00000601154 DCAF8L1A6NGE4 600 aa11.86□□□□□ -0.51
CCDC9-206ENST00000601154 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
CCDC9-206ENST00000601154 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
CCDC9-206ENST00000601154 STK32BQ9NY57 414 aa11.86□□□□□ -0.51
CCDC9-206ENST00000601154 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
CCDC9-206ENST00000601154 RGPD3A6NKT7 1758 aaPredicted RBP11.86□□□□□ -0.51
CCDC9-206ENST00000601154 AKAP12Q02952 1782 aa11.86□□□□□ -0.51
CCDC9-206ENST00000601154 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
CCDC9-206ENST00000601154 SBF2Q86WG5 1849 aa11.85□□□□□ -0.51
CCDC9-206ENST00000601154 BCL9O00512 1426 aa11.85□□□□□ -0.51
CCDC9-206ENST00000601154 ERBB3P21860 1342 aa11.85□□□□□ -0.51
CCDC9-206ENST00000601154 RGPD5Q99666 1765 aa11.84□□□□□ -0.51
CCDC9-206ENST00000601154 SBNO2Q9Y2G9 1366 aa11.84□□□□□ -0.51
CCDC9-206ENST00000601154 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
CCDC9-206ENST00000601154 CD163L1Q9NR16 1453 aa11.83□□□□□ -0.52
CCDC9-206ENST00000601154 MON2Q7Z3U7 1717 aa11.83□□□□□ -0.52
CCDC9-206ENST00000601154 USP31Q70CQ4 1352 aa11.83□□□□□ -0.52
CCDC9-206ENST00000601154 SLC15A2Q16348 729 aa11.83□□□□□ -0.52
CCDC9-206ENST00000601154 HDGFL2Q7Z4V5 671 aaPredicted RBP11.83□□□□□ -0.52
CCDC9-206ENST00000601154 ANKRD24Q8TF21 1146 aa11.83□□□□□ -0.52
CCDC9-206ENST00000601154 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
CCDC9-206ENST00000601154 ABCC6O95255 1503 aa11.82□□□□□ -0.52
CCDC9-206ENST00000601154 IL2RBP14784 551 aa11.82□□□□□ -0.52
CCDC9-206ENST00000601154 PTGER2P43116 358 aa11.82□□□□□ -0.52
CCDC9-206ENST00000601154 MYOM1P52179 1685 aa11.81□□□□□ -0.52
CCDC9-206ENST00000601154 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
CCDC9-206ENST00000601154 LTV1Q96GA3 475 aaPredicted RBP11.81□□□□□ -0.52
CCDC9-206ENST00000601154 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
CCDC9-206ENST00000601154 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
CCDC9-206ENST00000601154 NHSQ6T4R5 1651 aa11.8□□□□□ -0.52
CCDC9-206ENST00000601154 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
CCDC9-206ENST00000601154 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
CCDC9-206ENST00000601154 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
CCDC9-206ENST00000601154 ZNF827Q17R98 1081 aa11.78□□□□□ -0.52
CCDC9-206ENST00000601154 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
CCDC9-206ENST00000601154 LTN1O94822 1766 aa11.77□□□□□ -0.52
CCDC9-206ENST00000601154 SYT17Q9BSW7 474 aa11.77□□□□□ -0.53
CCDC9-206ENST00000601154 USP54Q70EL1 1684 aa11.77□□□□□ -0.53
CCDC9-206ENST00000601154 FBLN1P23142 703 aa11.76□□□□□ -0.53
CCDC9-206ENST00000601154 KLHL34Q8N239 644 aa11.76□□□□□ -0.53
CCDC9-206ENST00000601154 IP6K1Q92551 441 aa11.76□□□□□ -0.53
CCDC9-206ENST00000601154 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
CCDC9-206ENST00000601154 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
CCDC9-206ENST00000601154 LRRC4BQ9NT99 713 aa11.76□□□□□ -0.53
CCDC9-206ENST00000601154 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
CCDC9-206ENST00000601154 KCNQ4P56696 695 aa11.75□□□□□ -0.53
CCDC9-206ENST00000601154 COG3Q96JB2 828 aa11.75□□□□□ -0.53
CCDC9-206ENST00000601154 ARXQ96QS3 562 aa11.75□□□□□ -0.53
CCDC9-206ENST00000601154 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
CCDC9-206ENST00000601154 AMPHP49418 695 aa11.74□□□□□ -0.53
CCDC9-206ENST00000601154 MAP3K19Q56UN5 1328 aa11.74□□□□□ -0.53
CCDC9-206ENST00000601154 BTAF1O14981 1849 aa11.74□□□□□ -0.53
CCDC9-206ENST00000601154 HOXC9P31274 260 aa11.73□□□□□ -0.53
CCDC9-206ENST00000601154 TESK2Q96S53 571 aa11.73□□□□□ -0.53
CCDC9-206ENST00000601154 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
CCDC9-206ENST00000601154 ZNF784Q8NCA9 323 aaPredicted RBP11.72□□□□□ -0.53
CCDC9-206ENST00000601154 MEGF6O75095 1541 aa11.71□□□□□ -0.53
CCDC9-206ENST00000601154 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.53
CCDC9-206ENST00000601154 RRS1Q15050 365 aaKnown RBP11.71□□□□□ -0.53
CCDC9-206ENST00000601154 PELP1Q8IZL8 1130 aaKnown RBP11.71□□□□□ -0.53
CCDC9-206ENST00000601154 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
CCDC9-206ENST00000601154 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
CCDC9-206ENST00000601154 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
CCDC9-206ENST00000601154 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
CCDC9-206ENST00000601154 ANKRD36BQ8N2N9 1353 aa11.7□□□□□ -0.54
CCDC9-206ENST00000601154 SLC27A3Q5K4L6 730 aa11.7□□□□□ -0.54
CCDC9-206ENST00000601154 GGNBP2Q9H3C7 697 aa11.7□□□□□ -0.54
CCDC9-206ENST00000601154 NSD2O96028 1365 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms