RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 TOM1L2Q6ZVM7 507 aa24.3■■□□□ 1.48
USE1-208ENST00000600970 ANO8Q9HCE9 1232 aaPredicted RBP24.29■■□□□ 1.48
USE1-208ENST00000600970 AKAP12Q02952 1782 aa24.29■■□□□ 1.48
USE1-208ENST00000600970 PTF1AQ7RTS3 328 aa24.28■■□□□ 1.48
USE1-208ENST00000600970 AXIN2Q9Y2T1 843 aa24.28■■□□□ 1.48
USE1-208ENST00000600970 RGPD5Q99666 1765 aa24.27■■□□□ 1.48
USE1-208ENST00000600970 BCL11BQ9C0K0 894 aaPredicted RBP24.27■■□□□ 1.48
USE1-208ENST00000600970 WDR17Q8IZU2 1322 aa24.26■■□□□ 1.47
USE1-208ENST00000600970 DCAF8L1A6NGE4 600 aa24.25■■□□□ 1.47
USE1-208ENST00000600970 MARCH10Q8NA82 808 aaPredicted RBP24.25■■□□□ 1.47
USE1-208ENST00000600970 PROM2Q8N271 834 aa24.24■■□□□ 1.47
USE1-208ENST00000600970 PDGFDQ9GZP0 370 aaPredicted RBP24.23■■□□□ 1.47
USE1-208ENST00000600970 BCL9O00512 1426 aa24.23■■□□□ 1.47
USE1-208ENST00000600970 CPSF1Q10570 1443 aaKnown RBP24.23■■□□□ 1.47
USE1-208ENST00000600970 CDCA7Q9BWT1 371 aaPredicted RBP24.22■■□□□ 1.47
USE1-208ENST00000600970 ARHGEF25Q86VW2 580 aa24.21■■□□□ 1.47
USE1-208ENST00000600970 TRPM1Q7Z4N2 1603 aa24.21■■□□□ 1.47
USE1-208ENST00000600970 TTC21BQ7Z4L5 1316 aa24.19■■□□□ 1.46
USE1-208ENST00000600970 EVC2Q86UK5 1308 aa24.19■■□□□ 1.46
USE1-208ENST00000600970 MYOM1P52179 1685 aa24.19■■□□□ 1.46
USE1-208ENST00000600970 CARD10Q9BWT7 1032 aa24.19■■□□□ 1.46
USE1-208ENST00000600970 KCNH5Q8NCM2 988 aa24.18■■□□□ 1.46
USE1-208ENST00000600970 ZBTB7AO95365 584 aa24.17■■□□□ 1.46
USE1-208ENST00000600970 ZNF692Q9BU19 519 aaPredicted RBP24.17■■□□□ 1.46
USE1-208ENST00000600970 SOX12O15370 315 aa24.16■■□□□ 1.46
USE1-208ENST00000600970 CSB-PGBD3P0DP91 1061 aa24.16■■□□□ 1.46
USE1-208ENST00000600970 TXNRD1Q16881 649 aa24.16■■□□□ 1.46
USE1-208ENST00000600970 PTGER2P43116 358 aa24.15■■□□□ 1.46
USE1-208ENST00000600970 NFAT5O94916 1531 aa24.15■■□□□ 1.46
USE1-208ENST00000600970 EXOC5O00471 708 aa24.14■■□□□ 1.45
USE1-208ENST00000600970 ATF5Q9Y2D1 282 aaPredicted RBP24.14■■□□□ 1.45
USE1-208ENST00000600970 TTC21AQ8NDW8 1320 aa24.13■■□□□ 1.45
USE1-208ENST00000600970 L3MBTL2Q969R5 705 aa24.13■■□□□ 1.45
USE1-208ENST00000600970 STK32BQ9NY57 414 aa24.13■■□□□ 1.45
USE1-208ENST00000600970 SLC15A2Q16348 729 aa24.12■■□□□ 1.45
USE1-208ENST00000600970 CCDC7Q96M83 1385 aa24.12■■□□□ 1.45
USE1-208ENST00000600970 NHSQ6T4R5 1651 aa24.11■■□□□ 1.45
USE1-208ENST00000600970 TNS2Q63HR2 1409 aa24.1■■□□□ 1.45
USE1-208ENST00000600970 ABCC6O95255 1503 aa24.1■■□□□ 1.45
USE1-208ENST00000600970 MON2Q7Z3U7 1717 aa24.09■■□□□ 1.45
USE1-208ENST00000600970 KTN1Q86UP2 1357 aaKnown RBP24.08■■□□□ 1.45
USE1-208ENST00000600970 SYT17Q9BSW7 474 aa24.06■■□□□ 1.44
USE1-208ENST00000600970 FHDC1Q9C0D6 1143 aaPredicted RBP24.06■■□□□ 1.44
USE1-208ENST00000600970 ROCK2O75116 1388 aaKnown RBP24.05■■□□□ 1.44
USE1-208ENST00000600970 SGIP1Q9BQI5 828 aa24.05■■□□□ 1.44
USE1-208ENST00000600970 MTFR1LQ9H019 292 aa24.05■■□□□ 1.44
USE1-208ENST00000600970 USP54Q70EL1 1684 aa24.05■■□□□ 1.44
USE1-208ENST00000600970 PAPPAQ13219 1627 aa24.04■■□□□ 1.44
USE1-208ENST00000600970 ACSBG1Q96GR2 724 aa24.04■■□□□ 1.44
USE1-208ENST00000600970 LTN1O94822 1766 aa24.03■■□□□ 1.44
USE1-208ENST00000600970 UTRNP46939 3433 aa24.03■■□□□ 1.44
USE1-208ENST00000600970 BTAF1O14981 1849 aa24.03■■□□□ 1.44
USE1-208ENST00000600970 ZNF784Q8NCA9 323 aaPredicted RBP24.02■■□□□ 1.44
USE1-208ENST00000600970 ERBB3P21860 1342 aa24.02■■□□□ 1.44
USE1-208ENST00000600970 USP31Q70CQ4 1352 aa24.02■■□□□ 1.44
USE1-208ENST00000600970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.01■■□□□ 1.43
USE1-208ENST00000600970 SIN3AQ96ST3 1273 aa24.01■■□□□ 1.43
USE1-208ENST00000600970 CHD4Q14839 1912 aa24■■□□□ 1.43
USE1-208ENST00000600970 NLRP2Q9NX02 1062 aa23.99■■□□□ 1.43
USE1-208ENST00000600970 IL2RBP14784 551 aa23.98■■□□□ 1.43
USE1-208ENST00000600970 NME9Q86XW9 330 aa23.97■■□□□ 1.43
USE1-208ENST00000600970 ARXQ96QS3 562 aa23.97■■□□□ 1.43
USE1-208ENST00000600970 CD163L1Q9NR16 1453 aa23.97■■□□□ 1.43
USE1-208ENST00000600970 SBNO2Q9Y2G9 1366 aa23.95■■□□□ 1.42
USE1-208ENST00000600970 ANKRD24Q8TF21 1146 aa23.95■■□□□ 1.42
USE1-208ENST00000600970 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
USE1-208ENST00000600970 ZNF827Q17R98 1081 aa23.94■■□□□ 1.42
USE1-208ENST00000600970 LRRC4BQ9NT99 713 aa23.94■■□□□ 1.42
USE1-208ENST00000600970 MAP3K5Q99683 1374 aa23.93■■□□□ 1.42
USE1-208ENST00000600970 KAT6BQ8WYB5 2073 aa23.93■■□□□ 1.42
USE1-208ENST00000600970 QSER1Q2KHR3 1735 aa23.92■■□□□ 1.42
USE1-208ENST00000600970 TMC1Q8TDI8 760 aa23.9■■□□□ 1.42
USE1-208ENST00000600970 HDGFL2Q7Z4V5 671 aaPredicted RBP23.89■■□□□ 1.41
USE1-208ENST00000600970 EDC4Q6P2E9 1401 aaKnown RBP23.89■■□□□ 1.41
USE1-208ENST00000600970 COL24A1Q17RW2 1714 aa23.88■■□□□ 1.41
USE1-208ENST00000600970 AKT1S1Q96B36 256 aa23.88■■□□□ 1.41
USE1-208ENST00000600970 SLC12A5Q9H2X9 1139 aa23.88■■□□□ 1.41
USE1-208ENST00000600970 FAM208AQ9UK61 1670 aaKnown RBP23.88■■□□□ 1.41
USE1-208ENST00000600970 TUBGCP6Q96RT7 1819 aa23.87■■□□□ 1.41
USE1-208ENST00000600970 SLC27A3Q5K4L6 730 aa23.85■■□□□ 1.41
USE1-208ENST00000600970 DDX54Q8TDD1 881 aaKnown RBP23.85■■□□□ 1.41
USE1-208ENST00000600970 SLC16A10Q8TF71 515 aa23.85■■□□□ 1.41
USE1-208ENST00000600970 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
USE1-208ENST00000600970 A0A1W2PP64 1363 aa23.84■■□□□ 1.41
USE1-208ENST00000600970 GPR162Q16538 588 aa23.84■■□□□ 1.41
USE1-208ENST00000600970 IP6K1Q92551 441 aa23.84■■□□□ 1.41
USE1-208ENST00000600970 C1QTNF8P60827 252 aa23.83■■□□□ 1.41
USE1-208ENST00000600970 DOT1LQ8TEK3 1739 aa23.83■■□□□ 1.41
USE1-208ENST00000600970 PNPLA7Q6ZV29 1317 aa23.83■■□□□ 1.4
USE1-208ENST00000600970 LY75O60449 1722 aa23.82■■□□□ 1.4
USE1-208ENST00000600970 TERF2IPQ9NYB0 399 aa23.82■■□□□ 1.4
USE1-208ENST00000600970 SENP3-EIF4A1A0A087X0R7 540 aa23.81■■□□□ 1.4
USE1-208ENST00000600970 KLHL34Q8N239 644 aa23.81■■□□□ 1.4
USE1-208ENST00000600970 LTV1Q96GA3 475 aaPredicted RBP23.81■■□□□ 1.4
USE1-208ENST00000600970 POLD1P28340 1107 aa23.8■■□□□ 1.4
USE1-208ENST00000600970 KCNQ4P56696 695 aa23.8■■□□□ 1.4
USE1-208ENST00000600970 SHANK3Q9BYB0 1731 aa23.8■■□□□ 1.4
USE1-208ENST00000600970 RGPD2P0DJD1 1756 aa23.8■■□□□ 1.4
USE1-208ENST00000600970 TFCP2L1Q9NZI6 479 aa23.79■■□□□ 1.4
USE1-208ENST00000600970 ANKRD36BQ8N2N9 1353 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms