RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 SLC15A2Q16348 729 aa14.56□□□□□ -0.08
HIF3A-219ENST00000600879 AXIN2Q9Y2T1 843 aa14.56□□□□□ -0.08
HIF3A-219ENST00000600879 SBF2Q86WG5 1849 aa14.56□□□□□ -0.08
HIF3A-219ENST00000600879 SOX12O15370 315 aa14.55□□□□□ -0.08
HIF3A-219ENST00000600879 SRPK2P78362 688 aaKnown RBP14.55□□□□□ -0.08
HIF3A-219ENST00000600879 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
HIF3A-219ENST00000600879 SGIP1Q9BQI5 828 aa14.54□□□□□ -0.08
HIF3A-219ENST00000600879 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
HIF3A-219ENST00000600879 PPIP5K1Q6PFW1 1433 aa14.54□□□□□ -0.08
HIF3A-219ENST00000600879 RGPD3A6NKT7 1758 aaPredicted RBP14.54□□□□□ -0.08
HIF3A-219ENST00000600879 RGPD4Q7Z3J3 1758 aa14.54□□□□□ -0.08
HIF3A-219ENST00000600879 NLRP6P59044 892 aa14.53□□□□□ -0.08
HIF3A-219ENST00000600879 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
HIF3A-219ENST00000600879 ARXQ96QS3 562 aa14.53□□□□□ -0.08
HIF3A-219ENST00000600879 MTFR1LQ9H019 292 aa14.53□□□□□ -0.08
HIF3A-219ENST00000600879 C11orf95C9JLR9 678 aaPredicted RBP14.52□□□□□ -0.09
HIF3A-219ENST00000600879 GPR162Q16538 588 aa14.52□□□□□ -0.09
HIF3A-219ENST00000600879 ACSBG1Q96GR2 724 aa14.52□□□□□ -0.09
HIF3A-219ENST00000600879 AATKQ6ZMQ8 1374 aa14.51□□□□□ -0.09
HIF3A-219ENST00000600879 GIGYF1O75420 1035 aaPredicted RBP14.5□□□□□ -0.09
HIF3A-219ENST00000600879 CSB-PGBD3P0DP91 1061 aa14.5□□□□□ -0.09
HIF3A-219ENST00000600879 NBPF1Q3BBV0 1214 aa14.5□□□□□ -0.09
HIF3A-219ENST00000600879 WDR17Q8IZU2 1322 aa14.49□□□□□ -0.09
HIF3A-219ENST00000600879 ZNF827Q17R98 1081 aa14.49□□□□□ -0.09
HIF3A-219ENST00000600879 STAC3Q96MF2 364 aa14.49□□□□□ -0.09
HIF3A-219ENST00000600879 CABP1Q9NZU7 370 aa14.49□□□□□ -0.09
HIF3A-219ENST00000600879 WNK3Q9BYP7 1800 aa14.48□□□□□ -0.09
HIF3A-219ENST00000600879 SLIT3O75094 1523 aa14.47□□□□□ -0.09
HIF3A-219ENST00000600879 USP6P35125 1406 aa14.47□□□□□ -0.09
HIF3A-219ENST00000600879 COL18A1P39060 1754 aa14.47□□□□□ -0.09
HIF3A-219ENST00000600879 AKAP12Q02952 1782 aa14.47□□□□□ -0.09
HIF3A-219ENST00000600879 CENPJQ9HC77 1338 aaPredicted RBP14.46□□□□□ -0.09
HIF3A-219ENST00000600879 EXOC5O00471 708 aa14.46□□□□□ -0.09
HIF3A-219ENST00000600879 NLGN2Q8NFZ4 835 aa14.46□□□□□ -0.09
HIF3A-219ENST00000600879 CHD4Q14839 1912 aa14.45□□□□□ -0.1
HIF3A-219ENST00000600879 KCNQ4P56696 695 aa14.45□□□□□ -0.1
HIF3A-219ENST00000600879 CPSF1Q10570 1443 aaKnown RBP14.45□□□□□ -0.1
HIF3A-219ENST00000600879 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
HIF3A-219ENST00000600879 PIK3C2AO00443 1686 aa14.45□□□□□ -0.1
HIF3A-219ENST00000600879 CEP350Q5VT06 3117 aa14.45□□□□□ -0.1
HIF3A-219ENST00000600879 BCL9O00512 1426 aa14.44□□□□□ -0.1
HIF3A-219ENST00000600879 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
HIF3A-219ENST00000600879 RGPD5Q99666 1765 aa14.43□□□□□ -0.1
HIF3A-219ENST00000600879 ARHGEF25Q86VW2 580 aa14.43□□□□□ -0.1
HIF3A-219ENST00000600879 CDCA7Q9BWT1 371 aaPredicted RBP14.43□□□□□ -0.1
HIF3A-219ENST00000600879 GOLGB1Q14789 3259 aaKnown RBP14.43□□□□□ -0.1
HIF3A-219ENST00000600879 PAPPAQ13219 1627 aa14.42□□□□□ -0.1
HIF3A-219ENST00000600879 BRD4O60885 1362 aaPredicted RBP14.42□□□□□ -0.1
HIF3A-219ENST00000600879 QRICH2Q9H0J4 1663 aa14.42□□□□□ -0.1
HIF3A-219ENST00000600879 TNS2Q63HR2 1409 aa14.41□□□□□ -0.1
HIF3A-219ENST00000600879 SHANK3Q9BYB0 1731 aa14.41□□□□□ -0.1
HIF3A-219ENST00000600879 KIAA1210Q9ULL0 1709 aa14.41□□□□□ -0.1
HIF3A-219ENST00000600879 MAP3K5Q99683 1374 aa14.41□□□□□ -0.1
HIF3A-219ENST00000600879 NHSQ6T4R5 1651 aa14.4□□□□□ -0.1
HIF3A-219ENST00000600879 YBX3P16989 372 aaKnown RBP eCLIP14.4□□□□□ -0.1
HIF3A-219ENST00000600879 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
HIF3A-219ENST00000600879 NLRP2Q9NX02 1062 aa14.39□□□□□ -0.11
HIF3A-219ENST00000600879 KCNH5Q8NCM2 988 aa14.38□□□□□ -0.11
HIF3A-219ENST00000600879 ZNF526Q8TF50 670 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-219ENST00000600879 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
HIF3A-219ENST00000600879 PNPLA7Q6ZV29 1317 aa14.38□□□□□ -0.11
HIF3A-219ENST00000600879 POLD1P28340 1107 aa14.37□□□□□ -0.11
HIF3A-219ENST00000600879 BTAF1O14981 1849 aa14.36□□□□□ -0.11
HIF3A-219ENST00000600879 NFAT5O94916 1531 aa14.36□□□□□ -0.11
HIF3A-219ENST00000600879 CCDC7Q96M83 1385 aa14.36□□□□□ -0.11
HIF3A-219ENST00000600879 TRPM1Q7Z4N2 1603 aa14.36□□□□□ -0.11
HIF3A-219ENST00000600879 ATP10DQ9P241 1426 aa14.35□□□□□ -0.11
HIF3A-219ENST00000600879 MSL1Q68DK7 614 aa14.35□□□□□ -0.11
HIF3A-219ENST00000600879 TFCP2L1Q9NZI6 479 aa14.35□□□□□ -0.11
HIF3A-219ENST00000600879 WWC3Q9ULE0 1092 aa14.35□□□□□ -0.11
HIF3A-219ENST00000600879 EVC2Q86UK5 1308 aa14.35□□□□□ -0.11
HIF3A-219ENST00000600879 ABCC6O95255 1503 aa14.35□□□□□ -0.11
HIF3A-219ENST00000600879 MSH5O43196 834 aa14.34□□□□□ -0.11
HIF3A-219ENST00000600879 IL2RBP14784 551 aa14.34□□□□□ -0.11
HIF3A-219ENST00000600879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.34□□□□□ -0.11
HIF3A-219ENST00000600879 DDX54Q8TDD1 881 aaKnown RBP14.34□□□□□ -0.11
HIF3A-219ENST00000600879 SYTL4Q96C24 671 aaPredicted RBP14.33□□□□□ -0.12
HIF3A-219ENST00000600879 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-219ENST00000600879 ERBB3P21860 1342 aa14.32□□□□□ -0.12
HIF3A-219ENST00000600879 TTC21AQ8NDW8 1320 aa14.32□□□□□ -0.12
HIF3A-219ENST00000600879 KTN1Q86UP2 1357 aaKnown RBP14.32□□□□□ -0.12
HIF3A-219ENST00000600879 NME9Q86XW9 330 aa14.31□□□□□ -0.12
HIF3A-219ENST00000600879 ANKRD24Q8TF21 1146 aa14.31□□□□□ -0.12
HIF3A-219ENST00000600879 TUBGCP6Q96RT7 1819 aa14.3□□□□□ -0.12
HIF3A-219ENST00000600879 SLC16A10Q8TF71 515 aa14.3□□□□□ -0.12
HIF3A-219ENST00000600879 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
HIF3A-219ENST00000600879 PRIM1P49642 420 aaKnown RBP14.29□□□□□ -0.12
HIF3A-219ENST00000600879 GPBP1L1Q9HC44 474 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-219ENST00000600879 GRIN3BO60391 1043 aa14.28□□□□□ -0.12
HIF3A-219ENST00000600879 HSPA6P17066 643 aa14.28□□□□□ -0.12
HIF3A-219ENST00000600879 SLC27A3Q5K4L6 730 aa14.28□□□□□ -0.12
HIF3A-219ENST00000600879 COL23A1Q86Y22 540 aaPredicted RBP14.28□□□□□ -0.12
HIF3A-219ENST00000600879 L3MBTL2Q969R5 705 aa14.27□□□□□ -0.13
HIF3A-219ENST00000600879 KAT6BQ8WYB5 2073 aa14.26□□□□□ -0.13
HIF3A-219ENST00000600879 COL24A1Q17RW2 1714 aa14.26□□□□□ -0.13
HIF3A-219ENST00000600879 ROCK2O75116 1388 aaKnown RBP14.25□□□□□ -0.13
HIF3A-219ENST00000600879 NSD2O96028 1365 aa14.25□□□□□ -0.13
HIF3A-219ENST00000600879 LTN1O94822 1766 aa14.25□□□□□ -0.13
HIF3A-219ENST00000600879 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
HIF3A-219ENST00000600879 CCNL1Q9UK58 526 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms