RNA–Protein interactions for RNA: ENST00000600816.1

TMEM143-211, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-211ENST00000600816 OVOS2A0A0J9YW53 1432 aa22.62■■□□□ 1.21
TMEM143-211ENST00000600816 OVOS2Q6IE36 1432 aa22.62■■□□□ 1.21
TMEM143-211ENST00000600816 COL18A1P39060 1754 aa22.61■■□□□ 1.21
TMEM143-211ENST00000600816 BLMP54132 1417 aaPredicted RBP22.61■■□□□ 1.21
TMEM143-211ENST00000600816 CRB1P82279 1406 aa22.61■■□□□ 1.21
TMEM143-211ENST00000600816 CDCA8Q53HL2 280 aa22.61■■□□□ 1.21
TMEM143-211ENST00000600816 HSPA5P11021 654 aaKnown RBP22.6■■□□□ 1.21
TMEM143-211ENST00000600816 TOM1L2Q6ZVM7 507 aa22.6■■□□□ 1.21
TMEM143-211ENST00000600816 DEFB132Q7Z7B7 95 aa22.59■■□□□ 1.21
TMEM143-211ENST00000600816 WDR17Q8IZU2 1322 aa22.58■■□□□ 1.21
TMEM143-211ENST00000600816 EIF4G2P78344 907 aaKnown RBP eCLIP22.58■■□□□ 1.21
TMEM143-211ENST00000600816 THRAP3Q9Y2W1 955 aaKnown RBP22.58■■□□□ 1.21
TMEM143-211ENST00000600816 CSB-PGBD3P0DP91 1061 aa22.57■■□□□ 1.2
TMEM143-211ENST00000600816 FBLN1P23142 703 aa22.57■■□□□ 1.2
TMEM143-211ENST00000600816 USP54Q70EL1 1684 aa22.57■■□□□ 1.2
TMEM143-211ENST00000600816 COG3Q96JB2 828 aa22.56■■□□□ 1.2
TMEM143-211ENST00000600816 CARD14Q9BXL6 1004 aa22.56■■□□□ 1.2
TMEM143-211ENST00000600816 FYB1O15117 783 aa22.55■■□□□ 1.2
TMEM143-211ENST00000600816 POLR3GLQ9BT43 218 aa22.55■■□□□ 1.2
TMEM143-211ENST00000600816 GGNBP2Q9H3C7 697 aa22.55■■□□□ 1.2
TMEM143-211ENST00000600816 PDE3BQ13370 1112 aa22.54■■□□□ 1.2
TMEM143-211ENST00000600816 SF3B2Q13435 895 aaKnown RBP22.54■■□□□ 1.2
TMEM143-211ENST00000600816 CARD10Q9BWT7 1032 aa22.52■■□□□ 1.2
TMEM143-211ENST00000600816 FAM196AQ6ZSG2 479 aa22.5■■□□□ 1.19
TMEM143-211ENST00000600816 ANKRD24Q8TF21 1146 aa22.5■■□□□ 1.19
TMEM143-211ENST00000600816 ABCC6O95255 1503 aa22.5■■□□□ 1.19
TMEM143-211ENST00000600816 ERBB3P21860 1342 aa22.5■■□□□ 1.19
TMEM143-211ENST00000600816 MAP3K19Q56UN5 1328 aa22.5■■□□□ 1.19
TMEM143-211ENST00000600816 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
TMEM143-211ENST00000600816 MYOM1P52179 1685 aa22.49■■□□□ 1.19
TMEM143-211ENST00000600816 RGPD5Q99666 1765 aa22.49■■□□□ 1.19
TMEM143-211ENST00000600816 TRIM37O94972 964 aa22.49■■□□□ 1.19
TMEM143-211ENST00000600816 IP6K1Q92551 441 aa22.48■■□□□ 1.19
TMEM143-211ENST00000600816 NLRP2Q9NX02 1062 aa22.48■■□□□ 1.19
TMEM143-211ENST00000600816 C11orf95C9JLR9 678 aaPredicted RBP22.47■■□□□ 1.19
TMEM143-211ENST00000600816 RRS1Q15050 365 aaKnown RBP22.47■■□□□ 1.19
TMEM143-211ENST00000600816 DDB1Q16531 1140 aa22.46■■□□□ 1.19
TMEM143-211ENST00000600816 LTV1Q96GA3 475 aaPredicted RBP22.46■■□□□ 1.19
TMEM143-211ENST00000600816 DISP2A7MBM2 1401 aa22.46■■□□□ 1.19
TMEM143-211ENST00000600816 HOXC9P31274 260 aa22.45■■□□□ 1.18
TMEM143-211ENST00000600816 BAG6P46379 1132 aa22.45■■□□□ 1.18
TMEM143-211ENST00000600816 EN1Q05925 392 aaPredicted RBP22.45■■□□□ 1.18
TMEM143-211ENST00000600816 LTN1O94822 1766 aa22.45■■□□□ 1.18
TMEM143-211ENST00000600816 AMPHP49418 695 aa22.44■■□□□ 1.18
TMEM143-211ENST00000600816 CCDC7Q96M83 1385 aa22.44■■□□□ 1.18
TMEM143-211ENST00000600816 PARP4Q9UKK3 1724 aaKnown RBP22.44■■□□□ 1.18
TMEM143-211ENST00000600816 LRRC37A3O60309 1634 aa22.43■■□□□ 1.18
TMEM143-211ENST00000600816 CDCA7Q9BWT1 371 aaPredicted RBP22.43■■□□□ 1.18
TMEM143-211ENST00000600816 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
TMEM143-211ENST00000600816 APBA3O96018 575 aa22.4■■□□□ 1.18
TMEM143-211ENST00000600816 EZH2Q15910 746 aaKnown RBP22.39■■□□□ 1.17
TMEM143-211ENST00000600816 PANK3Q9H999 370 aa22.39■■□□□ 1.17
TMEM143-211ENST00000600816 OVOS2A0A0G2JMS6 1433 aa22.39■■□□□ 1.17
TMEM143-211ENST00000600816 EXOC5O00471 708 aa22.38■■□□□ 1.17
TMEM143-211ENST00000600816 PTF1AQ7RTS3 328 aa22.38■■□□□ 1.17
TMEM143-211ENST00000600816 RGPD1P0DJD0 1748 aa22.37■■□□□ 1.17
TMEM143-211ENST00000600816 TNS1Q9HBL0 1735 aaKnown RBP22.37■■□□□ 1.17
TMEM143-211ENST00000600816 CGNL1Q0VF96 1302 aa22.37■■□□□ 1.17
TMEM143-211ENST00000600816 IL2RBP14784 551 aa22.37■■□□□ 1.17
TMEM143-211ENST00000600816 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
TMEM143-211ENST00000600816 CAMKK2Q96RR4 588 aa22.36■■□□□ 1.17
TMEM143-211ENST00000600816 PEAK1Q9H792 1746 aa22.36■■□□□ 1.17
TMEM143-211ENST00000600816 RTL1A6NKG5 1358 aa22.36■■□□□ 1.17
TMEM143-211ENST00000600816 TNS2Q63HR2 1409 aa22.35■■□□□ 1.17
TMEM143-211ENST00000600816 HSP90AB2PQ58FF8 381 aa22.35■■□□□ 1.17
TMEM143-211ENST00000600816 EMILIN1Q9Y6C2 1016 aa22.35■■□□□ 1.17
TMEM143-211ENST00000600816 KIF20BQ96Q89 1820 aa22.35■■□□□ 1.17
TMEM143-211ENST00000600816 KIF7Q2M1P5 1343 aa22.33■■□□□ 1.17
TMEM143-211ENST00000600816 NBPF6Q5VWK0 638 aa22.32■■□□□ 1.16
TMEM143-211ENST00000600816 USHBP1Q8N6Y0 703 aa22.32■■□□□ 1.16
TMEM143-211ENST00000600816 NBPF4Q96M43 638 aa22.32■■□□□ 1.16
TMEM143-211ENST00000600816 PPM1GO15355 546 aaPredicted RBP22.31■■□□□ 1.16
TMEM143-211ENST00000600816 TNNT2P45379 298 aaPredicted RBP22.31■■□□□ 1.16
TMEM143-211ENST00000600816 INSRP06213 1382 aa22.3■■□□□ 1.16
TMEM143-211ENST00000600816 FLT4P35916 1363 aa22.3■■□□□ 1.16
TMEM143-211ENST00000600816 PSDA5PKW4 1024 aaPredicted RBP22.3■■□□□ 1.16
TMEM143-211ENST00000600816 BCL9O00512 1426 aa22.3■■□□□ 1.16
TMEM143-211ENST00000600816 BCL11BQ9C0K0 894 aaPredicted RBP22.29■■□□□ 1.16
TMEM143-211ENST00000600816 KCNQ2O43526 872 aa22.28■■□□□ 1.16
TMEM143-211ENST00000600816 ACSBG1Q96GR2 724 aa22.27■■□□□ 1.16
TMEM143-211ENST00000600816 POLKQ9UBT6 870 aa22.27■■□□□ 1.16
TMEM143-211ENST00000600816 MEGF6O75095 1541 aa22.26■■□□□ 1.15
TMEM143-211ENST00000600816 KIF24Q5T7B8 1368 aa22.26■■□□□ 1.15
TMEM143-211ENST00000600816 SMG6Q86US8 1419 aaKnown RBP22.26■■□□□ 1.15
TMEM143-211ENST00000600816 DDX54Q8TDD1 881 aaKnown RBP22.26■■□□□ 1.15
TMEM143-211ENST00000600816 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
TMEM143-211ENST00000600816 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
TMEM143-211ENST00000600816 SRCAPQ6ZRS2 3230 aa22.25■■□□□ 1.15
TMEM143-211ENST00000600816 R3HDM1Q15032 1099 aaKnown RBP22.25■■□□□ 1.15
TMEM143-211ENST00000600816 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
TMEM143-211ENST00000600816 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
TMEM143-211ENST00000600816 KNSTRNQ9Y448 316 aa22.22■■□□□ 1.15
TMEM143-211ENST00000600816 PLSCR1O15162 318 aa22.21■■□□□ 1.15
TMEM143-211ENST00000600816 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
TMEM143-211ENST00000600816 SBF2Q86WG5 1849 aa22.2■■□□□ 1.14
TMEM143-211ENST00000600816 AMER1Q5JTC6 1135 aaPredicted RBP22.2■■□□□ 1.14
TMEM143-211ENST00000600816 MORC1Q86VD1 984 aa22.2■■□□□ 1.14
TMEM143-211ENST00000600816 PROM2Q8N271 834 aa22.2■■□□□ 1.14
TMEM143-211ENST00000600816 RAPGEF4Q8WZA2 1011 aa22.2■■□□□ 1.14
TMEM143-211ENST00000600816 NSD2O96028 1365 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms