RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 RRS1Q15050 365 aaKnown RBP18.84■□□□□ 0.61
VRK3-219ENST00000600137 ILDR2Q71H61 639 aa18.84■□□□□ 0.61
VRK3-219ENST00000600137 ABCC6O95255 1503 aa18.84■□□□□ 0.61
VRK3-219ENST00000600137 COL5A2P05997 1499 aaPredicted RBP18.84■□□□□ 0.61
VRK3-219ENST00000600137 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
VRK3-219ENST00000600137 ZBTB7CA1YPR0 619 aa18.83■□□□□ 0.6
VRK3-219ENST00000600137 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
VRK3-219ENST00000600137 DDX10Q13206 875 aaKnown RBP18.83■□□□□ 0.6
VRK3-219ENST00000600137 IP6K1Q92551 441 aa18.83■□□□□ 0.6
VRK3-219ENST00000600137 GLI3P10071 1580 aa18.82■□□□□ 0.6
VRK3-219ENST00000600137 GJD4Q96KN9 370 aaPredicted RBP18.82■□□□□ 0.6
VRK3-219ENST00000600137 POLKQ9UBT6 870 aa18.82■□□□□ 0.6
VRK3-219ENST00000600137 PEAK1Q9H792 1746 aa18.82■□□□□ 0.6
VRK3-219ENST00000600137 HOXC9P31274 260 aa18.81■□□□□ 0.6
VRK3-219ENST00000600137 RBM6P78332 1123 aaKnown RBP18.81■□□□□ 0.6
VRK3-219ENST00000600137 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
VRK3-219ENST00000600137 EMILIN1Q9Y6C2 1016 aa18.81■□□□□ 0.6
VRK3-219ENST00000600137 SPATA31A5Q5VU36 1347 aa18.8■□□□□ 0.6
VRK3-219ENST00000600137 SPATA31A7Q8IWB4 1347 aa18.8■□□□□ 0.6
VRK3-219ENST00000600137 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
VRK3-219ENST00000600137 MORC1Q86VD1 984 aa18.8■□□□□ 0.6
VRK3-219ENST00000600137 STRN4Q9NRL3 753 aa18.8■□□□□ 0.6
VRK3-219ENST00000600137 ONECUT3O60422 494 aaPredicted RBP18.79■□□□□ 0.6
VRK3-219ENST00000600137 RXRBP28702 533 aa18.79■□□□□ 0.6
VRK3-219ENST00000600137 SPATA31A1Q5TZJ5 1347 aa18.78■□□□□ 0.6
VRK3-219ENST00000600137 TNNT2P45379 298 aaPredicted RBP18.78■□□□□ 0.6
VRK3-219ENST00000600137 WDR17Q8IZU2 1322 aa18.77■□□□□ 0.6
VRK3-219ENST00000600137 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.6
VRK3-219ENST00000600137 EVA1CP58658 441 aa18.77■□□□□ 0.6
VRK3-219ENST00000600137 HSP90AB2PQ58FF8 381 aa18.77■□□□□ 0.6
VRK3-219ENST00000600137 KIF24Q5T7B8 1368 aa18.77■□□□□ 0.6
VRK3-219ENST00000600137 ERBB3P21860 1342 aa18.76■□□□□ 0.59
VRK3-219ENST00000600137 AMPHP49418 695 aa18.76■□□□□ 0.59
VRK3-219ENST00000600137 RTL1A6NKG5 1358 aa18.76■□□□□ 0.59
VRK3-219ENST00000600137 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
VRK3-219ENST00000600137 ANKRD24Q8TF21 1146 aa18.75■□□□□ 0.59
VRK3-219ENST00000600137 CRB1P82279 1406 aa18.74■□□□□ 0.59
VRK3-219ENST00000600137 CDK12Q9NYV4 1490 aaPredicted RBP18.74■□□□□ 0.59
VRK3-219ENST00000600137 INSRP06213 1382 aa18.74■□□□□ 0.59
VRK3-219ENST00000600137 FLT4P35916 1363 aa18.74■□□□□ 0.59
VRK3-219ENST00000600137 CARD10Q9BWT7 1032 aa18.72■□□□□ 0.59
VRK3-219ENST00000600137 CCDC9Q9Y3X0 531 aaKnown RBP18.72■□□□□ 0.59
VRK3-219ENST00000600137 RGPD2P0DJD1 1756 aa18.72■□□□□ 0.59
VRK3-219ENST00000600137 RGS12O14924 1447 aa18.72■□□□□ 0.59
VRK3-219ENST00000600137 CNGB1Q14028 1251 aaPredicted RBP18.71■□□□□ 0.59
VRK3-219ENST00000600137 BARGINQ6ZT62 677 aa18.71■□□□□ 0.59
VRK3-219ENST00000600137 TOM1L2Q6ZVM7 507 aa18.71■□□□□ 0.59
VRK3-219ENST00000600137 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
VRK3-219ENST00000600137 TCP11L2Q8N4U5 519 aa18.7■□□□□ 0.58
VRK3-219ENST00000600137 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
VRK3-219ENST00000600137 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
VRK3-219ENST00000600137 THSD7AQ9UPZ6 1657 aa18.69■□□□□ 0.58
VRK3-219ENST00000600137 PARD3Q8TEW0 1356 aa18.69■□□□□ 0.58
VRK3-219ENST00000600137 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
VRK3-219ENST00000600137 MTHFSP49914 203 aa18.69■□□□□ 0.58
VRK3-219ENST00000600137 NBPF6Q5VWK0 638 aa18.69■□□□□ 0.58
VRK3-219ENST00000600137 NBPF4Q96M43 638 aa18.69■□□□□ 0.58
VRK3-219ENST00000600137 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
VRK3-219ENST00000600137 CSB-PGBD3P0DP91 1061 aa18.68■□□□□ 0.58
VRK3-219ENST00000600137 SEPT12Q8IYM1 358 aa18.68■□□□□ 0.58
VRK3-219ENST00000600137 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
VRK3-219ENST00000600137 DISP2A7MBM2 1401 aa18.67■□□□□ 0.58
VRK3-219ENST00000600137 FAM208AQ9UK61 1670 aaKnown RBP18.67■□□□□ 0.58
VRK3-219ENST00000600137 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
VRK3-219ENST00000600137 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
VRK3-219ENST00000600137 NLRP2Q9NX02 1062 aa18.67■□□□□ 0.58
VRK3-219ENST00000600137 NCAPD2Q15021 1401 aa18.65■□□□□ 0.58
VRK3-219ENST00000600137 EYA1Q99502 592 aa18.64■□□□□ 0.57
VRK3-219ENST00000600137 WNK3Q9BYP7 1800 aa18.64■□□□□ 0.57
VRK3-219ENST00000600137 IL13P35225 146 aa18.63■□□□□ 0.57
VRK3-219ENST00000600137 COL3A1P02461 1466 aaPredicted RBP18.63■□□□□ 0.57
VRK3-219ENST00000600137 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
VRK3-219ENST00000600137 PARP4Q9UKK3 1724 aaKnown RBP18.62■□□□□ 0.57
VRK3-219ENST00000600137 RALBP1Q15311 655 aa18.6■□□□□ 0.57
VRK3-219ENST00000600137 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
VRK3-219ENST00000600137 RGPD1P0DJD0 1748 aa18.6■□□□□ 0.57
VRK3-219ENST00000600137 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
VRK3-219ENST00000600137 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
VRK3-219ENST00000600137 EP400Q96L91 3159 aa18.58■□□□□ 0.57
VRK3-219ENST00000600137 IL2RBP14784 551 aa18.58■□□□□ 0.56
VRK3-219ENST00000600137 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.56
VRK3-219ENST00000600137 LRRC37A3O60309 1634 aa18.58■□□□□ 0.56
VRK3-219ENST00000600137 MEGF6O75095 1541 aa18.58■□□□□ 0.56
VRK3-219ENST00000600137 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
VRK3-219ENST00000600137 DDB1Q16531 1140 aa18.55■□□□□ 0.56
VRK3-219ENST00000600137 FAM182BQ5T319 152 aa18.55■□□□□ 0.56
VRK3-219ENST00000600137 MARCH10Q8NA82 808 aaPredicted RBP18.55■□□□□ 0.56
VRK3-219ENST00000600137 A0A0G2JS52 829 aa18.54■□□□□ 0.56
VRK3-219ENST00000600137 EXOC5O00471 708 aa18.54■□□□□ 0.56
VRK3-219ENST00000600137 MYT1Q01538 1121 aa18.54■□□□□ 0.56
VRK3-219ENST00000600137 AEBP1Q8IUX7 1158 aa18.54■□□□□ 0.56
VRK3-219ENST00000600137 OVOS2A0A0G2JMS6 1433 aa18.54■□□□□ 0.56
VRK3-219ENST00000600137 KDRP35968 1356 aa18.54■□□□□ 0.56
VRK3-219ENST00000600137 SHANK3Q9BYB0 1731 aa18.53■□□□□ 0.56
VRK3-219ENST00000600137 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.56
VRK3-219ENST00000600137 TNS2Q63HR2 1409 aa18.52■□□□□ 0.56
VRK3-219ENST00000600137 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
VRK3-219ENST00000600137 SOCS7O14512 581 aa18.5■□□□□ 0.55
VRK3-219ENST00000600137 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
VRK3-219ENST00000600137 SULT6B1Q6IMI4 303 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms