RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 USP6P35125 1406 aa17.92■□□□□ 0.46
HOMER3-211ENST00000599808 NLRP6P59044 892 aa17.92■□□□□ 0.46
HOMER3-211ENST00000599808 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
HOMER3-211ENST00000599808 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
HOMER3-211ENST00000599808 BCL11BQ9C0K0 894 aaPredicted RBP17.91■□□□□ 0.46
HOMER3-211ENST00000599808 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
HOMER3-211ENST00000599808 TOM1L2Q6ZVM7 507 aa17.9■□□□□ 0.46
HOMER3-211ENST00000599808 CABP1Q9NZU7 370 aa17.9■□□□□ 0.46
HOMER3-211ENST00000599808 PROM2Q8N271 834 aa17.89■□□□□ 0.45
HOMER3-211ENST00000599808 AXIN2Q9Y2T1 843 aa17.89■□□□□ 0.45
HOMER3-211ENST00000599808 MYOM1P52179 1685 aa17.89■□□□□ 0.45
HOMER3-211ENST00000599808 UTRNP46939 3433 aa17.89■□□□□ 0.45
HOMER3-211ENST00000599808 MARCH10Q8NA82 808 aaPredicted RBP17.88■□□□□ 0.45
HOMER3-211ENST00000599808 WDR17Q8IZU2 1322 aa17.88■□□□□ 0.45
HOMER3-211ENST00000599808 BCL9O00512 1426 aa17.87■□□□□ 0.45
HOMER3-211ENST00000599808 ZBTB7AO95365 584 aa17.86■□□□□ 0.45
HOMER3-211ENST00000599808 CPSF1Q10570 1443 aaKnown RBP17.86■□□□□ 0.45
HOMER3-211ENST00000599808 PTGER2P43116 358 aa17.85■□□□□ 0.45
HOMER3-211ENST00000599808 CDCA7Q9BWT1 371 aaPredicted RBP17.84■□□□□ 0.45
HOMER3-211ENST00000599808 ARHGEF25Q86VW2 580 aa17.83■□□□□ 0.44
HOMER3-211ENST00000599808 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.44
HOMER3-211ENST00000599808 TXNRD1Q16881 649 aa17.82■□□□□ 0.44
HOMER3-211ENST00000599808 CARD10Q9BWT7 1032 aa17.82■□□□□ 0.44
HOMER3-211ENST00000599808 CHD4Q14839 1912 aa17.82■□□□□ 0.44
HOMER3-211ENST00000599808 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
HOMER3-211ENST00000599808 TRPM1Q7Z4N2 1603 aa17.81■□□□□ 0.44
HOMER3-211ENST00000599808 SOX12O15370 315 aa17.8■□□□□ 0.44
HOMER3-211ENST00000599808 CSB-PGBD3P0DP91 1061 aa17.8■□□□□ 0.44
HOMER3-211ENST00000599808 SLC15A2Q16348 729 aa17.8■□□□□ 0.44
HOMER3-211ENST00000599808 STK32BQ9NY57 414 aa17.8■□□□□ 0.44
HOMER3-211ENST00000599808 NFAT5O94916 1531 aa17.8■□□□□ 0.44
HOMER3-211ENST00000599808 KCNH5Q8NCM2 988 aa17.79■□□□□ 0.44
HOMER3-211ENST00000599808 NHSQ6T4R5 1651 aa17.79■□□□□ 0.44
HOMER3-211ENST00000599808 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
HOMER3-211ENST00000599808 EVC2Q86UK5 1308 aa17.78■□□□□ 0.44
HOMER3-211ENST00000599808 EXOC5O00471 708 aa17.78■□□□□ 0.44
HOMER3-211ENST00000599808 ZNF784Q8NCA9 323 aaPredicted RBP17.78■□□□□ 0.44
HOMER3-211ENST00000599808 SYT17Q9BSW7 474 aa17.78■□□□□ 0.44
HOMER3-211ENST00000599808 FHDC1Q9C0D6 1143 aaPredicted RBP17.78■□□□□ 0.44
HOMER3-211ENST00000599808 TNS2Q63HR2 1409 aa17.78■□□□□ 0.44
HOMER3-211ENST00000599808 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
HOMER3-211ENST00000599808 CCDC7Q96M83 1385 aa17.77■□□□□ 0.43
HOMER3-211ENST00000599808 SGIP1Q9BQI5 828 aa17.76■□□□□ 0.43
HOMER3-211ENST00000599808 MTFR1LQ9H019 292 aa17.76■□□□□ 0.43
HOMER3-211ENST00000599808 ABCC6O95255 1503 aa17.76■□□□□ 0.43
HOMER3-211ENST00000599808 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
HOMER3-211ENST00000599808 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
HOMER3-211ENST00000599808 TTC21AQ8NDW8 1320 aa17.75■□□□□ 0.43
HOMER3-211ENST00000599808 BTAF1O14981 1849 aa17.75■□□□□ 0.43
HOMER3-211ENST00000599808 LTN1O94822 1766 aa17.74■□□□□ 0.43
HOMER3-211ENST00000599808 L3MBTL2Q969R5 705 aa17.73■□□□□ 0.43
HOMER3-211ENST00000599808 ACSBG1Q96GR2 724 aa17.73■□□□□ 0.43
HOMER3-211ENST00000599808 KTN1Q86UP2 1357 aaKnown RBP17.72■□□□□ 0.43
HOMER3-211ENST00000599808 USP54Q70EL1 1684 aa17.71■□□□□ 0.43
HOMER3-211ENST00000599808 ERBB3P21860 1342 aa17.7■□□□□ 0.42
HOMER3-211ENST00000599808 ARXQ96QS3 562 aa17.69■□□□□ 0.42
HOMER3-211ENST00000599808 MAP3K5Q99683 1374 aa17.68■□□□□ 0.42
HOMER3-211ENST00000599808 ZNF827Q17R98 1081 aa17.68■□□□□ 0.42
HOMER3-211ENST00000599808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.68■□□□□ 0.42
HOMER3-211ENST00000599808 NLRP2Q9NX02 1062 aa17.68■□□□□ 0.42
HOMER3-211ENST00000599808 ROCK2O75116 1388 aaKnown RBP17.67■□□□□ 0.42
HOMER3-211ENST00000599808 USP31Q70CQ4 1352 aa17.67■□□□□ 0.42
HOMER3-211ENST00000599808 QSER1Q2KHR3 1735 aa17.67■□□□□ 0.42
HOMER3-211ENST00000599808 IL2RBP14784 551 aa17.67■□□□□ 0.42
HOMER3-211ENST00000599808 LRRC4BQ9NT99 713 aa17.66■□□□□ 0.42
HOMER3-211ENST00000599808 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
HOMER3-211ENST00000599808 COL24A1Q17RW2 1714 aa17.65■□□□□ 0.42
HOMER3-211ENST00000599808 NME9Q86XW9 330 aa17.65■□□□□ 0.42
HOMER3-211ENST00000599808 TUBGCP6Q96RT7 1819 aa17.65■□□□□ 0.42
HOMER3-211ENST00000599808 CD163L1Q9NR16 1453 aa17.64■□□□□ 0.41
HOMER3-211ENST00000599808 C1QTNF8P60827 252 aa17.64■□□□□ 0.41
HOMER3-211ENST00000599808 SIN3AQ96ST3 1273 aa17.64■□□□□ 0.41
HOMER3-211ENST00000599808 SBNO2Q9Y2G9 1366 aa17.64■□□□□ 0.41
HOMER3-211ENST00000599808 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
HOMER3-211ENST00000599808 ANKRD24Q8TF21 1146 aa17.63■□□□□ 0.41
HOMER3-211ENST00000599808 GPR162Q16538 588 aa17.61■□□□□ 0.41
HOMER3-211ENST00000599808 AKT1S1Q96B36 256 aa17.61■□□□□ 0.41
HOMER3-211ENST00000599808 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
HOMER3-211ENST00000599808 LY75O60449 1722 aa17.59■□□□□ 0.41
HOMER3-211ENST00000599808 SLC16A10Q8TF71 515 aa17.59■□□□□ 0.41
HOMER3-211ENST00000599808 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.41
HOMER3-211ENST00000599808 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
HOMER3-211ENST00000599808 SLC27A3Q5K4L6 730 aa17.58■□□□□ 0.4
HOMER3-211ENST00000599808 KLHL34Q8N239 644 aa17.58■□□□□ 0.4
HOMER3-211ENST00000599808 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
HOMER3-211ENST00000599808 EDC4Q6P2E9 1401 aaKnown RBP17.57■□□□□ 0.4
HOMER3-211ENST00000599808 NEUROD1Q13562 356 aa17.57■□□□□ 0.4
HOMER3-211ENST00000599808 TMC1Q8TDI8 760 aa17.57■□□□□ 0.4
HOMER3-211ENST00000599808 SLC12A5Q9H2X9 1139 aa17.57■□□□□ 0.4
HOMER3-211ENST00000599808 RGPD2P0DJD1 1756 aa17.57■□□□□ 0.4
HOMER3-211ENST00000599808 SHANK3Q9BYB0 1731 aa17.57■□□□□ 0.4
HOMER3-211ENST00000599808 POLD1P28340 1107 aa17.56■□□□□ 0.4
HOMER3-211ENST00000599808 KCNQ4P56696 695 aa17.56■□□□□ 0.4
HOMER3-211ENST00000599808 HDGFL2Q7Z4V5 671 aaPredicted RBP17.56■□□□□ 0.4
HOMER3-211ENST00000599808 IP6K1Q92551 441 aa17.55■□□□□ 0.4
HOMER3-211ENST00000599808 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
HOMER3-211ENST00000599808 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
HOMER3-211ENST00000599808 NLGN2Q8NFZ4 835 aa17.54■□□□□ 0.4
HOMER3-211ENST00000599808 LTV1Q96GA3 475 aaPredicted RBP17.54■□□□□ 0.4
HOMER3-211ENST00000599808 TFCP2L1Q9NZI6 479 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms