RNA–Protein interactions for RNA: ENST00000599373.5

DDX49-209, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-209ENST00000599373 PTGER2P43116 358 aa23.6■■□□□ 1.37
DDX49-209ENST00000599373 PROM2Q8N271 834 aa23.6■■□□□ 1.37
DDX49-209ENST00000599373 SENP3-EIF4A1A0A087X0R7 540 aa23.59■■□□□ 1.37
DDX49-209ENST00000599373 PLSCR1O15162 318 aa23.59■■□□□ 1.37
DDX49-209ENST00000599373 CDK19Q9BWU1 502 aa23.59■■□□□ 1.37
DDX49-209ENST00000599373 RGPD3A6NKT7 1758 aaPredicted RBP23.58■■□□□ 1.37
DDX49-209ENST00000599373 RGPD4Q7Z3J3 1758 aa23.58■■□□□ 1.37
DDX49-209ENST00000599373 ATF5Q9Y2D1 282 aaPredicted RBP23.58■■□□□ 1.37
DDX49-209ENST00000599373 THRAP3Q9Y2W1 955 aaKnown RBP23.58■■□□□ 1.37
DDX49-209ENST00000599373 ACEP12821 1306 aa23.58■■□□□ 1.36
DDX49-209ENST00000599373 CPDO75976 1380 aa23.57■■□□□ 1.36
DDX49-209ENST00000599373 POLR3AO14802 1390 aaPredicted RBP23.56■■□□□ 1.36
DDX49-209ENST00000599373 TMF1P82094 1093 aa23.56■■□□□ 1.36
DDX49-209ENST00000599373 OVOS2A0A0G2JMS6 1433 aa23.56■■□□□ 1.36
DDX49-209ENST00000599373 OVOS2A0A0J9YW53 1432 aa23.56■■□□□ 1.36
DDX49-209ENST00000599373 OVOS2Q6IE36 1432 aa23.56■■□□□ 1.36
DDX49-209ENST00000599373 COL5A2P05997 1499 aaPredicted RBP23.56■■□□□ 1.36
DDX49-209ENST00000599373 POLR3GLQ9BT43 218 aa23.55■■□□□ 1.36
DDX49-209ENST00000599373 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
DDX49-209ENST00000599373 ARHGEF28Q8N1W1 1705 aaKnown RBP23.55■■□□□ 1.36
DDX49-209ENST00000599373 USP19O94966 1318 aa23.55■■□□□ 1.36
DDX49-209ENST00000599373 ABTB2Q8N961 1025 aa23.54■■□□□ 1.36
DDX49-209ENST00000599373 TOPAZ1Q8N9V7 1692 aa23.54■■□□□ 1.36
DDX49-209ENST00000599373 LRRC37A3O60309 1634 aa23.53■■□□□ 1.36
DDX49-209ENST00000599373 PLEKHG3A1L390 1219 aa23.53■■□□□ 1.36
DDX49-209ENST00000599373 C1QTNF8P60827 252 aa23.53■■□□□ 1.36
DDX49-209ENST00000599373 SYT17Q9BSW7 474 aa23.53■■□□□ 1.36
DDX49-209ENST00000599373 FHDC1Q9C0D6 1143 aaPredicted RBP23.53■■□□□ 1.36
DDX49-209ENST00000599373 BCL11BQ9C0K0 894 aaPredicted RBP23.53■■□□□ 1.36
DDX49-209ENST00000599373 GCP02774 474 aa23.52■■□□□ 1.36
DDX49-209ENST00000599373 KTN1Q86UP2 1357 aaKnown RBP23.51■■□□□ 1.35
DDX49-209ENST00000599373 CRB1P82279 1406 aa23.5■■□□□ 1.35
DDX49-209ENST00000599373 CHD4Q14839 1912 aa23.49■■□□□ 1.35
DDX49-209ENST00000599373 SLC24A1O60721 1099 aa23.49■■□□□ 1.35
DDX49-209ENST00000599373 DDB1Q16531 1140 aa23.48■■□□□ 1.35
DDX49-209ENST00000599373 NLRP13Q86W25 1043 aa23.48■■□□□ 1.35
DDX49-209ENST00000599373 MARCH10Q8NA82 808 aaPredicted RBP23.48■■□□□ 1.35
DDX49-209ENST00000599373 SBNO2Q9Y2G9 1366 aa23.48■■□□□ 1.35
DDX49-209ENST00000599373 ZBTB7CA1YPR0 619 aa23.47■■□□□ 1.35
DDX49-209ENST00000599373 IFFO2Q5TF58 517 aa23.47■■□□□ 1.35
DDX49-209ENST00000599373 SGIP1Q9BQI5 828 aa23.47■■□□□ 1.35
DDX49-209ENST00000599373 CDCA8Q53HL2 280 aa23.46■■□□□ 1.35
DDX49-209ENST00000599373 SLC15A2Q16348 729 aa23.44■■□□□ 1.34
DDX49-209ENST00000599373 TXNRD1Q16881 649 aa23.44■■□□□ 1.34
DDX49-209ENST00000599373 GTF3C3Q9Y5Q9 886 aa23.44■■□□□ 1.34
DDX49-209ENST00000599373 CCDC184Q52MB2 194 aa23.43■■□□□ 1.34
DDX49-209ENST00000599373 STK32BQ9NY57 414 aa23.43■■□□□ 1.34
DDX49-209ENST00000599373 PER1O15534 1290 aaPredicted RBP23.42■■□□□ 1.34
DDX49-209ENST00000599373 WNK3Q9BYP7 1800 aa23.42■■□□□ 1.34
DDX49-209ENST00000599373 RALBP1Q15311 655 aa23.41■■□□□ 1.34
DDX49-209ENST00000599373 TOM1L2Q6ZVM7 507 aa23.41■■□□□ 1.34
DDX49-209ENST00000599373 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
DDX49-209ENST00000599373 COL18A1P39060 1754 aa23.41■■□□□ 1.34
DDX49-209ENST00000599373 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
DDX49-209ENST00000599373 MTFR1LQ9H019 292 aa23.4■■□□□ 1.34
DDX49-209ENST00000599373 MRS2Q9HD23 443 aa23.4■■□□□ 1.34
DDX49-209ENST00000599373 AATKQ6ZMQ8 1374 aa23.4■■□□□ 1.34
DDX49-209ENST00000599373 SRPK2P78362 688 aaKnown RBP23.39■■□□□ 1.33
DDX49-209ENST00000599373 BCL9O00512 1426 aa23.39■■□□□ 1.33
DDX49-209ENST00000599373 AKAP12Q02952 1782 aa23.39■■□□□ 1.33
DDX49-209ENST00000599373 PPIP5K1Q6PFW1 1433 aa23.36■■□□□ 1.33
DDX49-209ENST00000599373 NLRP6P59044 892 aa23.36■■□□□ 1.33
DDX49-209ENST00000599373 ARXQ96QS3 562 aa23.36■■□□□ 1.33
DDX49-209ENST00000599373 CABP2Q9NPB3 220 aa23.36■■□□□ 1.33
DDX49-209ENST00000599373 SLIT3O75094 1523 aa23.36■■□□□ 1.33
DDX49-209ENST00000599373 CENPJQ9HC77 1338 aaPredicted RBP23.35■■□□□ 1.33
DDX49-209ENST00000599373 PANK3Q9H999 370 aa23.35■■□□□ 1.33
DDX49-209ENST00000599373 WDR17Q8IZU2 1322 aa23.34■■□□□ 1.33
DDX49-209ENST00000599373 BRD4O60885 1362 aaPredicted RBP23.34■■□□□ 1.33
DDX49-209ENST00000599373 RGPD5Q99666 1765 aa23.34■■□□□ 1.33
DDX49-209ENST00000599373 MYBBP1AQ9BQG0 1328 aaKnown RBP23.33■■□□□ 1.33
DDX49-209ENST00000599373 CABP1Q9NZU7 370 aa23.33■■□□□ 1.33
DDX49-209ENST00000599373 MAP3K5Q99683 1374 aa23.3■■□□□ 1.32
DDX49-209ENST00000599373 CDCA7Q9BWT1 371 aaPredicted RBP23.3■■□□□ 1.32
DDX49-209ENST00000599373 PAPPAQ13219 1627 aa23.3■■□□□ 1.32
DDX49-209ENST00000599373 GIGYF1O75420 1035 aaPredicted RBP23.29■■□□□ 1.32
DDX49-209ENST00000599373 USP6P35125 1406 aa23.29■■□□□ 1.32
DDX49-209ENST00000599373 GPR162Q16538 588 aa23.29■■□□□ 1.32
DDX49-209ENST00000599373 PIK3C2AO00443 1686 aa23.28■■□□□ 1.32
DDX49-209ENST00000599373 ZNF827Q17R98 1081 aa23.28■■□□□ 1.32
DDX49-209ENST00000599373 ACSBG1Q96GR2 724 aa23.28■■□□□ 1.32
DDX49-209ENST00000599373 NPC1L1Q9UHC9 1359 aa23.27■■□□□ 1.32
DDX49-209ENST00000599373 CEP350Q5VT06 3117 aa23.27■■□□□ 1.32
DDX49-209ENST00000599373 EXOC5O00471 708 aa23.27■■□□□ 1.32
DDX49-209ENST00000599373 PUS7Q96PZ0 661 aaKnown RBP23.27■■□□□ 1.32
DDX49-209ENST00000599373 CARD10Q9BWT7 1032 aa23.27■■□□□ 1.32
DDX49-209ENST00000599373 CPSF1Q10570 1443 aaKnown RBP23.26■■□□□ 1.31
DDX49-209ENST00000599373 HNRNPUQ00839 825 aaKnown RBP eCLIP23.26■■□□□ 1.31
DDX49-209ENST00000599373 ARHGEF25Q86VW2 580 aa23.26■■□□□ 1.31
DDX49-209ENST00000599373 NHSQ6T4R5 1651 aa23.25■■□□□ 1.31
DDX49-209ENST00000599373 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
DDX49-209ENST00000599373 CSB-PGBD3P0DP91 1061 aa23.24■■□□□ 1.31
DDX49-209ENST00000599373 FAM9BQ8IZU0 186 aa23.24■■□□□ 1.31
DDX49-209ENST00000599373 GOLGB1Q14789 3259 aaKnown RBP23.24■■□□□ 1.31
DDX49-209ENST00000599373 SOX12O15370 315 aa23.23■■□□□ 1.31
DDX49-209ENST00000599373 PNISRQ8TF01 805 aaKnown RBP23.23■■□□□ 1.31
DDX49-209ENST00000599373 LRRC4BQ9NT99 713 aa23.23■■□□□ 1.31
DDX49-209ENST00000599373 KLHL34Q8N239 644 aa23.22■■□□□ 1.31
DDX49-209ENST00000599373 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
DDX49-209ENST00000599373 KCNH5Q8NCM2 988 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms