RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 LARP1Q6PKG0 1096 aaKnown RBP19.64■□□□□ 0.73
LIG1-218ENST00000599322 TCP11L2Q8N4U5 519 aa19.64■□□□□ 0.73
LIG1-218ENST00000599322 THRAP3Q9Y2W1 955 aaKnown RBP19.64■□□□□ 0.73
LIG1-218ENST00000599322 USP31Q70CQ4 1352 aa19.64■□□□□ 0.73
LIG1-218ENST00000599322 PIK3C2AO00443 1686 aa19.63■□□□□ 0.73
LIG1-218ENST00000599322 DISP2A7MBM2 1401 aa19.63■□□□□ 0.73
LIG1-218ENST00000599322 TOM1L2Q6ZVM7 507 aa19.63■□□□□ 0.73
LIG1-218ENST00000599322 ARHGEF25Q86VW2 580 aa19.63■□□□□ 0.73
LIG1-218ENST00000599322 COG3Q96JB2 828 aa19.63■□□□□ 0.73
LIG1-218ENST00000599322 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
LIG1-218ENST00000599322 MON2Q7Z3U7 1717 aa19.62■□□□□ 0.73
LIG1-218ENST00000599322 ANKRD36BQ8N2N9 1353 aa19.62■□□□□ 0.73
LIG1-218ENST00000599322 PSDA5PKW4 1024 aaPredicted RBP19.62■□□□□ 0.73
LIG1-218ENST00000599322 PDE3BQ13370 1112 aa19.62■□□□□ 0.73
LIG1-218ENST00000599322 CD163L1Q9NR16 1453 aa19.61■□□□□ 0.73
LIG1-218ENST00000599322 BARGINQ6ZT62 677 aa19.61■□□□□ 0.73
LIG1-218ENST00000599322 PARP4Q9UKK3 1724 aaKnown RBP19.61■□□□□ 0.73
LIG1-218ENST00000599322 RREB1Q92766 1687 aa19.61■□□□□ 0.73
LIG1-218ENST00000599322 COL18A1P39060 1754 aa19.59■□□□□ 0.73
LIG1-218ENST00000599322 CRB1P82279 1406 aa19.59■□□□□ 0.73
LIG1-218ENST00000599322 WNK3Q9BYP7 1800 aa19.58■□□□□ 0.73
LIG1-218ENST00000599322 RGPD5Q99666 1765 aa19.58■□□□□ 0.73
LIG1-218ENST00000599322 NUP188Q5SRE5 1749 aa19.58■□□□□ 0.72
LIG1-218ENST00000599322 COL5A2P05997 1499 aaPredicted RBP19.58■□□□□ 0.72
LIG1-218ENST00000599322 SBF2Q86WG5 1849 aa19.58■□□□□ 0.72
LIG1-218ENST00000599322 WDR17Q8IZU2 1322 aa19.57■□□□□ 0.72
LIG1-218ENST00000599322 C11orf95C9JLR9 678 aaPredicted RBP19.56■□□□□ 0.72
LIG1-218ENST00000599322 TRIM37O94972 964 aa19.56■□□□□ 0.72
LIG1-218ENST00000599322 HSPA5P11021 654 aaKnown RBP19.56■□□□□ 0.72
LIG1-218ENST00000599322 EZH2Q15910 746 aaKnown RBP19.56■□□□□ 0.72
LIG1-218ENST00000599322 FAM196AQ6ZSG2 479 aa19.56■□□□□ 0.72
LIG1-218ENST00000599322 CDCA7Q9BWT1 371 aaPredicted RBP19.56■□□□□ 0.72
LIG1-218ENST00000599322 AXIN2Q9Y2T1 843 aa19.55■□□□□ 0.72
LIG1-218ENST00000599322 PEAK1Q9H792 1746 aa19.54■□□□□ 0.72
LIG1-218ENST00000599322 CAMKK2Q96RR4 588 aa19.54■□□□□ 0.72
LIG1-218ENST00000599322 AMPHP49418 695 aa19.53■□□□□ 0.72
LIG1-218ENST00000599322 R3HDM1Q15032 1099 aaKnown RBP19.53■□□□□ 0.72
LIG1-218ENST00000599322 CARD10Q9BWT7 1032 aa19.53■□□□□ 0.72
LIG1-218ENST00000599322 LRRC37A3O60309 1634 aa19.53■□□□□ 0.72
LIG1-218ENST00000599322 DDB1Q16531 1140 aa19.52■□□□□ 0.72
LIG1-218ENST00000599322 NLRP2Q9NX02 1062 aa19.52■□□□□ 0.72
LIG1-218ENST00000599322 NFAT5O94916 1531 aa19.51■□□□□ 0.71
LIG1-218ENST00000599322 ABCC6O95255 1503 aa19.51■□□□□ 0.71
LIG1-218ENST00000599322 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
LIG1-218ENST00000599322 CCDC7Q96M83 1385 aa19.51■□□□□ 0.71
LIG1-218ENST00000599322 OVOS2A0A0J9YW53 1432 aa19.51■□□□□ 0.71
LIG1-218ENST00000599322 OVOS2Q6IE36 1432 aa19.51■□□□□ 0.71
LIG1-218ENST00000599322 FYB1O15117 783 aa19.5■□□□□ 0.71
LIG1-218ENST00000599322 APBA3O96018 575 aa19.5■□□□□ 0.71
LIG1-218ENST00000599322 ANKRD24Q8TF21 1146 aa19.49■□□□□ 0.71
LIG1-218ENST00000599322 IP6K1Q92551 441 aa19.49■□□□□ 0.71
LIG1-218ENST00000599322 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
LIG1-218ENST00000599322 PARD3Q8TEW0 1356 aa19.48■□□□□ 0.71
LIG1-218ENST00000599322 CGNL1Q0VF96 1302 aa19.48■□□□□ 0.71
LIG1-218ENST00000599322 RGPD3A6NKT7 1758 aaPredicted RBP19.47■□□□□ 0.71
LIG1-218ENST00000599322 RGPD4Q7Z3J3 1758 aa19.47■□□□□ 0.71
LIG1-218ENST00000599322 EXOC5O00471 708 aa19.47■□□□□ 0.71
LIG1-218ENST00000599322 ERBB3P21860 1342 aa19.47■□□□□ 0.71
LIG1-218ENST00000599322 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
LIG1-218ENST00000599322 LTV1Q96GA3 475 aaPredicted RBP19.46■□□□□ 0.71
LIG1-218ENST00000599322 MAP3K19Q56UN5 1328 aa19.44■□□□□ 0.7
LIG1-218ENST00000599322 CARD14Q9BXL6 1004 aa19.43■□□□□ 0.7
LIG1-218ENST00000599322 LTN1O94822 1766 aa19.42■□□□□ 0.7
LIG1-218ENST00000599322 IL2RBP14784 551 aa19.42■□□□□ 0.7
LIG1-218ENST00000599322 HOXC9P31274 260 aa19.42■□□□□ 0.7
LIG1-218ENST00000599322 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
LIG1-218ENST00000599322 SMG6Q86US8 1419 aaKnown RBP19.42■□□□□ 0.7
LIG1-218ENST00000599322 RRS1Q15050 365 aaKnown RBP19.41■□□□□ 0.7
LIG1-218ENST00000599322 PANK3Q9H999 370 aa19.41■□□□□ 0.7
LIG1-218ENST00000599322 RTL1A6NKG5 1358 aa19.41■□□□□ 0.7
LIG1-218ENST00000599322 PPM1GO15355 546 aaPredicted RBP19.38■□□□□ 0.69
LIG1-218ENST00000599322 FBLN1P23142 703 aa19.38■□□□□ 0.69
LIG1-218ENST00000599322 KIF24Q5T7B8 1368 aa19.38■□□□□ 0.69
LIG1-218ENST00000599322 KNSTRNQ9Y448 316 aa19.38■□□□□ 0.69
LIG1-218ENST00000599322 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
LIG1-218ENST00000599322 CASZ1Q86V15 1759 aa19.37■□□□□ 0.69
LIG1-218ENST00000599322 MYOM1P52179 1685 aa19.36■□□□□ 0.69
LIG1-218ENST00000599322 FLT4P35916 1363 aa19.36■□□□□ 0.69
LIG1-218ENST00000599322 PTF1AQ7RTS3 328 aa19.36■□□□□ 0.69
LIG1-218ENST00000599322 NBPF14Q5TI25 921 aa19.35■□□□□ 0.69
LIG1-218ENST00000599322 MARCH10Q8NA82 808 aaPredicted RBP19.34■□□□□ 0.69
LIG1-218ENST00000599322 RAPGEF4Q8WZA2 1011 aa19.34■□□□□ 0.69
LIG1-218ENST00000599322 MORC1Q86VD1 984 aa19.33■□□□□ 0.68
LIG1-218ENST00000599322 BCL11BQ9C0K0 894 aaPredicted RBP19.33■□□□□ 0.68
LIG1-218ENST00000599322 BCL9O00512 1426 aa19.33■□□□□ 0.68
LIG1-218ENST00000599322 NSD2O96028 1365 aa19.32■□□□□ 0.68
LIG1-218ENST00000599322 INSRP06213 1382 aa19.32■□□□□ 0.68
LIG1-218ENST00000599322 PLSCR1O15162 318 aa19.32■□□□□ 0.68
LIG1-218ENST00000599322 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
LIG1-218ENST00000599322 HSP90AB2PQ58FF8 381 aa19.32■□□□□ 0.68
LIG1-218ENST00000599322 FAM208AQ9UK61 1670 aaKnown RBP19.32■□□□□ 0.68
LIG1-218ENST00000599322 TNS2Q63HR2 1409 aa19.32■□□□□ 0.68
LIG1-218ENST00000599322 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
LIG1-218ENST00000599322 NHSQ6T4R5 1651 aa19.3■□□□□ 0.68
LIG1-218ENST00000599322 KIF7Q2M1P5 1343 aa19.3■□□□□ 0.68
LIG1-218ENST00000599322 TATP17735 454 aaPredicted RBP19.3■□□□□ 0.68
LIG1-218ENST00000599322 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
LIG1-218ENST00000599322 ZCRB1Q8TBF4 217 aaKnown RBP19.29■□□□□ 0.68
LIG1-218ENST00000599322 ANO8Q9HCE9 1232 aaPredicted RBP19.29■□□□□ 0.68
LIG1-218ENST00000599322 KAT6BQ8WYB5 2073 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms