RNA–Protein interactions for RNA: ENST00000599305.1

CEACAM3-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 4

Gene CEACAM3, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-206ENST00000599305 PODXL2Q9NZ53 605 aa9.84□□□□□ -0.83
CEACAM3-206ENST00000599305 AXIN2Q9Y2T1 843 aa9.84□□□□□ -0.83
CEACAM3-206ENST00000599305 COL22A1Q8NFW1 1626 aaPredicted RBP9.84□□□□□ -0.83
CEACAM3-206ENST00000599305 CPDO75976 1380 aa9.84□□□□□ -0.83
CEACAM3-206ENST00000599305 NRKQ7Z2Y5 1582 aa9.84□□□□□ -0.83
CEACAM3-206ENST00000599305 PIK3C2AO00443 1686 aa9.83□□□□□ -0.84
CEACAM3-206ENST00000599305 AFF2P51816 1311 aa9.83□□□□□ -0.84
CEACAM3-206ENST00000599305 MAP3K19Q56UN5 1328 aa9.83□□□□□ -0.84
CEACAM3-206ENST00000599305 CCER2I3L3R5 266 aa9.83□□□□□ -0.84
CEACAM3-206ENST00000599305 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
CEACAM3-206ENST00000599305 BTG4Q9NY30 223 aa9.83□□□□□ -0.84
CEACAM3-206ENST00000599305 POLKQ9UBT6 870 aa9.83□□□□□ -0.84
CEACAM3-206ENST00000599305 USP21Q9UK80 565 aa9.83□□□□□ -0.84
CEACAM3-206ENST00000599305 AMPHP49418 695 aa9.82□□□□□ -0.84
CEACAM3-206ENST00000599305 EVA1CP58658 441 aa9.82□□□□□ -0.84
CEACAM3-206ENST00000599305 UNC5CLQ8IV45 518 aa9.82□□□□□ -0.84
CEACAM3-206ENST00000599305 NPC1L1Q9UHC9 1359 aa9.82□□□□□ -0.84
CEACAM3-206ENST00000599305 SLIT3O75094 1523 aa9.82□□□□□ -0.84
CEACAM3-206ENST00000599305 NSD2O96028 1365 aa9.81□□□□□ -0.84
CEACAM3-206ENST00000599305 AATKQ6ZMQ8 1374 aa9.81□□□□□ -0.84
CEACAM3-206ENST00000599305 PPM1GO15355 546 aaPredicted RBP9.81□□□□□ -0.84
CEACAM3-206ENST00000599305 POTEAQ6S8J7 498 aa9.81□□□□□ -0.84
CEACAM3-206ENST00000599305 IP6K1Q92551 441 aa9.81□□□□□ -0.84
CEACAM3-206ENST00000599305 QTRT2Q9H974 415 aaKnown RBP9.81□□□□□ -0.84
CEACAM3-206ENST00000599305 STRN4Q9NRL3 753 aa9.81□□□□□ -0.84
CEACAM3-206ENST00000599305 EMILIN1Q9Y6C2 1016 aa9.81□□□□□ -0.84
CEACAM3-206ENST00000599305 BCL9LQ86UU0 1499 aa9.8□□□□□ -0.84
CEACAM3-206ENST00000599305 HOXC9P31274 260 aa9.8□□□□□ -0.84
CEACAM3-206ENST00000599305 HSP90AB2PQ58FF8 381 aa9.8□□□□□ -0.84
CEACAM3-206ENST00000599305 ZNF772Q68DY9 489 aaPredicted RBP9.8□□□□□ -0.84
CEACAM3-206ENST00000599305 NFAT5O94916 1531 aa9.8□□□□□ -0.84
CEACAM3-206ENST00000599305 SLIT2O94813 1529 aa9.79□□□□□ -0.84
CEACAM3-206ENST00000599305 MTHFSP49914 203 aa9.79□□□□□ -0.84
CEACAM3-206ENST00000599305 LARP1Q6PKG0 1096 aaKnown RBP9.79□□□□□ -0.84
CEACAM3-206ENST00000599305 LTV1Q96GA3 475 aaPredicted RBP9.79□□□□□ -0.84
CEACAM3-206ENST00000599305 CAMTA1Q9Y6Y1 1673 aa9.78□□□□□ -0.84
CEACAM3-206ENST00000599305 PPP2R1AP30153 589 aa9.78□□□□□ -0.84
CEACAM3-206ENST00000599305 VPS72Q15906 364 aa9.78□□□□□ -0.84
CEACAM3-206ENST00000599305 ANKRD24Q8TF21 1146 aa9.78□□□□□ -0.84
CEACAM3-206ENST00000599305 TRPC5Q9UL62 973 aaPredicted RBP9.78□□□□□ -0.84
CEACAM3-206ENST00000599305 MARF1Q9Y4F3 1742 aaKnown RBP9.78□□□□□ -0.84
CEACAM3-206ENST00000599305 CRYBG1Q9Y4K1 1723 aa9.77□□□□□ -0.85
CEACAM3-206ENST00000599305 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.85
CEACAM3-206ENST00000599305 ERICH6BQ5W0A0 696 aa9.77□□□□□ -0.85
CEACAM3-206ENST00000599305 GJD4Q96KN9 370 aaPredicted RBP9.77□□□□□ -0.85
CEACAM3-206ENST00000599305 CCDC9Q9Y3X0 531 aaKnown RBP9.77□□□□□ -0.85
CEACAM3-206ENST00000599305 PHRF1Q9P1Y6 1649 aaKnown RBP9.77□□□□□ -0.85
CEACAM3-206ENST00000599305 ANP32CO43423 234 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 NEFLP07196 543 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 RALBP1Q15311 655 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 TOM1L2Q6ZVM7 507 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 NLRP2Q9NX02 1062 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 USP35Q9P2H5 1018 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 SPATA31A5Q5VU36 1347 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 SPATA31A7Q8IWB4 1347 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 ABCA3Q99758 1704 aa9.76□□□□□ -0.85
CEACAM3-206ENST00000599305 ATRNO75882 1429 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 USP54Q70EL1 1684 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 RXRBP28702 533 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 RBM6P78332 1123 aaKnown RBP9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 NBPF6Q5VWK0 638 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 NBPF4Q96M43 638 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 PRKRIP1Q9H875 184 aaPredicted RBP9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 ERBB3P21860 1342 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 SPATA31A1Q5TZJ5 1347 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 WDR17Q8IZU2 1322 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 KIF20BQ96Q89 1820 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 INSRP06213 1382 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 FLT4P35916 1363 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 PARD3Q8TEW0 1356 aa9.75□□□□□ -0.85
CEACAM3-206ENST00000599305 COL5A2P05997 1499 aaPredicted RBP9.74□□□□□ -0.85
CEACAM3-206ENST00000599305 EIF4A2Q14240 407 aaKnown RBP9.74□□□□□ -0.85
CEACAM3-206ENST00000599305 YTHDC1Q96MU7 727 aaKnown RBP9.74□□□□□ -0.85
CEACAM3-206ENST00000599305 CARD10Q9BWT7 1032 aa9.74□□□□□ -0.85
CEACAM3-206ENST00000599305 RTL1A6NKG5 1358 aa9.74□□□□□ -0.85
CEACAM3-206ENST00000599305 KIF24Q5T7B8 1368 aa9.74□□□□□ -0.85
CEACAM3-206ENST00000599305 COL18A1P39060 1754 aa9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 COL14A1Q05707 1796 aaKnown RBP9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 ONECUT3O60422 494 aaPredicted RBP9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 IL13P35225 146 aa9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 FAM98CQ17RN3 349 aaKnown RBP9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 TCP11L2Q8N4U5 519 aa9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 EYA1Q99502 592 aa9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 SPINK5Q9NQ38 1064 aaPredicted RBP9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 BLMP54132 1417 aaPredicted RBP9.73□□□□□ -0.85
CEACAM3-206ENST00000599305 LMO7Q8WWI1 1683 aa9.72□□□□□ -0.85
CEACAM3-206ENST00000599305 USHBP1Q8N6Y0 703 aa9.72□□□□□ -0.85
CEACAM3-206ENST00000599305 DIAPH1O60610 1272 aaKnown RBP9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 CAPN15O75808 1086 aa9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 BARGINQ6ZT62 677 aa9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 SEPT12Q8IYM1 358 aa9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 PKNOX2Q96KN3 472 aa9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 CFAP53Q96M91 514 aa9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 MYBBP1AQ9BQG0 1328 aaKnown RBP9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 CRB1P82279 1406 aa9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 SMG6Q86US8 1419 aaKnown RBP9.71□□□□□ -0.86
CEACAM3-206ENST00000599305 PEAK1Q9H792 1746 aa9.7□□□□□ -0.86
CEACAM3-206ENST00000599305 MAP2P11137 1827 aaKnown RBP9.7□□□□□ -0.86
CEACAM3-206ENST00000599305 ILDR2Q71H61 639 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms