RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 PSDA5PKW4 1024 aaPredicted RBP22.44■■□□□ 1.18
SMG9-208ENST00000598886 EZH2Q15910 746 aaKnown RBP22.44■■□□□ 1.18
SMG9-208ENST00000598886 ZNF692Q9BU19 519 aaPredicted RBP22.44■■□□□ 1.18
SMG9-208ENST00000598886 ARHGEF25Q86VW2 580 aa22.43■■□□□ 1.18
SMG9-208ENST00000598886 KTN1Q86UP2 1357 aaKnown RBP22.42■■□□□ 1.18
SMG9-208ENST00000598886 USP31Q70CQ4 1352 aa22.41■■□□□ 1.18
SMG9-208ENST00000598886 WDR17Q8IZU2 1322 aa22.41■■□□□ 1.18
SMG9-208ENST00000598886 PDE3BQ13370 1112 aa22.4■■□□□ 1.18
SMG9-208ENST00000598886 OVOS2A0A0G2JMS6 1433 aa22.4■■□□□ 1.18
SMG9-208ENST00000598886 OVOS2A0A0J9YW53 1432 aa22.4■■□□□ 1.18
SMG9-208ENST00000598886 OVOS2Q6IE36 1432 aa22.4■■□□□ 1.18
SMG9-208ENST00000598886 CARD11Q9BXL7 1154 aa22.38■■□□□ 1.17
SMG9-208ENST00000598886 APBA3O96018 575 aa22.37■■□□□ 1.17
SMG9-208ENST00000598886 KCNH5Q8NCM2 988 aa22.37■■□□□ 1.17
SMG9-208ENST00000598886 BCL9O00512 1426 aa22.37■■□□□ 1.17
SMG9-208ENST00000598886 TONSLQ96HA7 1378 aa22.37■■□□□ 1.17
SMG9-208ENST00000598886 ZBTB7CA1YPR0 619 aa22.36■■□□□ 1.17
SMG9-208ENST00000598886 R3HDM1Q15032 1099 aaKnown RBP22.36■■□□□ 1.17
SMG9-208ENST00000598886 EDC4Q6P2E9 1401 aaKnown RBP22.34■■□□□ 1.17
SMG9-208ENST00000598886 A0A1W2PP64 1363 aa22.34■■□□□ 1.17
SMG9-208ENST00000598886 TOM1L2Q6ZVM7 507 aa22.33■■□□□ 1.17
SMG9-208ENST00000598886 TESK2Q96S53 571 aa22.33■■□□□ 1.17
SMG9-208ENST00000598886 CARD10Q9BWT7 1032 aa22.32■■□□□ 1.16
SMG9-208ENST00000598886 NHSQ6T4R5 1651 aa22.32■■□□□ 1.16
SMG9-208ENST00000598886 CASZ1Q86V15 1759 aa22.32■■□□□ 1.16
SMG9-208ENST00000598886 NME9Q86XW9 330 aa22.31■■□□□ 1.16
SMG9-208ENST00000598886 PUS7Q96PZ0 661 aaKnown RBP22.31■■□□□ 1.16
SMG9-208ENST00000598886 FAM208AQ9UK61 1670 aaKnown RBP22.3■■□□□ 1.16
SMG9-208ENST00000598886 C11orf95C9JLR9 678 aaPredicted RBP22.3■■□□□ 1.16
SMG9-208ENST00000598886 SOX12O15370 315 aa22.3■■□□□ 1.16
SMG9-208ENST00000598886 DDB1Q16531 1140 aa22.3■■□□□ 1.16
SMG9-208ENST00000598886 PTF1AQ7RTS3 328 aa22.3■■□□□ 1.16
SMG9-208ENST00000598886 MARCH10Q8NA82 808 aaPredicted RBP22.3■■□□□ 1.16
SMG9-208ENST00000598886 SLC12A5Q9H2X9 1139 aa22.3■■□□□ 1.16
SMG9-208ENST00000598886 TNS2Q63HR2 1409 aa22.3■■□□□ 1.16
SMG9-208ENST00000598886 CCDC7Q96M83 1385 aa22.28■■□□□ 1.16
SMG9-208ENST00000598886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.28■■□□□ 1.16
SMG9-208ENST00000598886 ERBB3P21860 1342 aa22.28■■□□□ 1.16
SMG9-208ENST00000598886 CDCA7Q9BWT1 371 aaPredicted RBP22.27■■□□□ 1.16
SMG9-208ENST00000598886 NINLQ9Y2I6 1382 aa22.25■■□□□ 1.15
SMG9-208ENST00000598886 PLSCR1O15162 318 aa22.24■■□□□ 1.15
SMG9-208ENST00000598886 MYOM1P52179 1685 aa22.23■■□□□ 1.15
SMG9-208ENST00000598886 SHANK3Q9BYB0 1731 aa22.23■■□□□ 1.15
SMG9-208ENST00000598886 RGPD2P0DJD1 1756 aa22.23■■□□□ 1.15
SMG9-208ENST00000598886 HDGFL2Q7Z4V5 671 aaPredicted RBP22.23■■□□□ 1.15
SMG9-208ENST00000598886 TMC1Q8TDI8 760 aa22.23■■□□□ 1.15
SMG9-208ENST00000598886 BCL11BQ9C0K0 894 aaPredicted RBP22.23■■□□□ 1.15
SMG9-208ENST00000598886 PAPPAQ13219 1627 aa22.23■■□□□ 1.15
SMG9-208ENST00000598886 ST20-MTHFSA0A0A6YYL1 179 aa22.22■■□□□ 1.15
SMG9-208ENST00000598886 BTAF1O14981 1849 aa22.22■■□□□ 1.15
SMG9-208ENST00000598886 CSB-PGBD3P0DP91 1061 aa22.2■■□□□ 1.14
SMG9-208ENST00000598886 PROM2Q8N271 834 aa22.2■■□□□ 1.14
SMG9-208ENST00000598886 ANO8Q9HCE9 1232 aaPredicted RBP22.2■■□□□ 1.14
SMG9-208ENST00000598886 TERF2IPQ9NYB0 399 aa22.2■■□□□ 1.14
SMG9-208ENST00000598886 KIF20BQ96Q89 1820 aa22.2■■□□□ 1.14
SMG9-208ENST00000598886 TRIM26Q12899 539 aaPredicted RBP22.19■■□□□ 1.14
SMG9-208ENST00000598886 ANKRD36BQ8N2N9 1353 aa22.17■■□□□ 1.14
SMG9-208ENST00000598886 NBPF14Q5TI25 921 aa22.16■■□□□ 1.14
SMG9-208ENST00000598886 ANKRD24Q8TF21 1146 aa22.16■■□□□ 1.14
SMG9-208ENST00000598886 USP47Q96K76 1375 aa22.15■■□□□ 1.14
SMG9-208ENST00000598886 EXOC5O00471 708 aa22.15■■□□□ 1.14
SMG9-208ENST00000598886 KCNQ2O43526 872 aa22.13■■□□□ 1.13
SMG9-208ENST00000598886 IP6K1Q92551 441 aa22.13■■□□□ 1.13
SMG9-208ENST00000598886 NLRP2Q9NX02 1062 aa22.13■■□□□ 1.13
SMG9-208ENST00000598886 DOT1LQ8TEK3 1739 aa22.13■■□□□ 1.13
SMG9-208ENST00000598886 IL2RBP14784 551 aa22.12■■□□□ 1.13
SMG9-208ENST00000598886 MAP3K19Q56UN5 1328 aa22.11■■□□□ 1.13
SMG9-208ENST00000598886 ANKRD26Q9UPS8 1709 aa22.11■■□□□ 1.13
SMG9-208ENST00000598886 QSER1Q2KHR3 1735 aa22.1■■□□□ 1.13
SMG9-208ENST00000598886 PDGFDQ9GZP0 370 aaPredicted RBP22.1■■□□□ 1.13
SMG9-208ENST00000598886 SLC24A1O60721 1099 aa22.09■■□□□ 1.13
SMG9-208ENST00000598886 TXNRD1Q16881 649 aa22.09■■□□□ 1.13
SMG9-208ENST00000598886 LY75O60449 1722 aa22.09■■□□□ 1.13
SMG9-208ENST00000598886 FBLN1P23142 703 aa22.08■■□□□ 1.13
SMG9-208ENST00000598886 RTL1A6NKG5 1358 aa22.08■■□□□ 1.12
SMG9-208ENST00000598886 TUBGCP6Q96RT7 1819 aa22.08■■□□□ 1.12
SMG9-208ENST00000598886 MEGF6O75095 1541 aa22.07■■□□□ 1.12
SMG9-208ENST00000598886 COL24A1Q17RW2 1714 aa22.07■■□□□ 1.12
SMG9-208ENST00000598886 HOXC9P31274 260 aa22.07■■□□□ 1.12
SMG9-208ENST00000598886 SPON1Q9HCB6 807 aa22.07■■□□□ 1.12
SMG9-208ENST00000598886 FYB1O15117 783 aa22.05■■□□□ 1.12
SMG9-208ENST00000598886 COG3Q96JB2 828 aa22.05■■□□□ 1.12
SMG9-208ENST00000598886 ACSBG1Q96GR2 724 aa22.04■■□□□ 1.12
SMG9-208ENST00000598886 TMF1P82094 1093 aa22.03■■□□□ 1.12
SMG9-208ENST00000598886 NSD2O96028 1365 aa22.02■■□□□ 1.12
SMG9-208ENST00000598886 KAT6BQ8WYB5 2073 aa22.02■■□□□ 1.11
SMG9-208ENST00000598886 PTGER2P43116 358 aa22.01■■□□□ 1.11
SMG9-208ENST00000598886 SLC15A2Q16348 729 aa22.01■■□□□ 1.11
SMG9-208ENST00000598886 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
SMG9-208ENST00000598886 PKD1L3Q7Z443 1732 aa22■■□□□ 1.11
SMG9-208ENST00000598886 GGNBP2Q9H3C7 697 aa21.99■■□□□ 1.11
SMG9-208ENST00000598886 TOGARAM1Q9Y4F4 1720 aa21.98■■□□□ 1.11
SMG9-208ENST00000598886 RRS1Q15050 365 aaKnown RBP21.98■■□□□ 1.11
SMG9-208ENST00000598886 SGIP1Q9BQI5 828 aa21.98■■□□□ 1.11
SMG9-208ENST00000598886 CARD14Q9BXL6 1004 aa21.98■■□□□ 1.11
SMG9-208ENST00000598886 LRRC4BQ9NT99 713 aa21.98■■□□□ 1.11
SMG9-208ENST00000598886 STK32BQ9NY57 414 aa21.97■■□□□ 1.11
SMG9-208ENST00000598886 TIMELESSQ9UNS1 1208 aa21.97■■□□□ 1.11
SMG9-208ENST00000598886 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
SMG9-208ENST00000598886 ZBTB7AO95365 584 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms