RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 NME9Q86XW9 330 aa27.77■■■□□ 2.04
ARHGEF1-217ENST00000598812 COL18A1P39060 1754 aa27.76■■■□□ 2.03
ARHGEF1-217ENST00000598812 USP31Q70CQ4 1352 aa27.76■■■□□ 2.03
ARHGEF1-217ENST00000598812 PDE3BQ13370 1112 aa27.76■■■□□ 2.03
ARHGEF1-217ENST00000598812 BAG6P46379 1132 aa27.75■■■□□ 2.03
ARHGEF1-217ENST00000598812 TOM1L2Q6ZVM7 507 aa27.75■■■□□ 2.03
ARHGEF1-217ENST00000598812 NFAT5O94916 1531 aa27.75■■■□□ 2.03
ARHGEF1-217ENST00000598812 FAM196AQ6ZSG2 479 aa27.74■■■□□ 2.03
ARHGEF1-217ENST00000598812 AXIN2Q9Y2T1 843 aa27.74■■■□□ 2.03
ARHGEF1-217ENST00000598812 RGPD1P0DJD0 1748 aa27.74■■■□□ 2.03
ARHGEF1-217ENST00000598812 PSDA5PKW4 1024 aaPredicted RBP27.73■■■□□ 2.03
ARHGEF1-217ENST00000598812 TMF1P82094 1093 aa27.73■■■□□ 2.03
ARHGEF1-217ENST00000598812 WDR17Q8IZU2 1322 aa27.72■■■□□ 2.03
ARHGEF1-217ENST00000598812 USP54Q70EL1 1684 aa27.72■■■□□ 2.03
ARHGEF1-217ENST00000598812 TNS1Q9HBL0 1735 aaKnown RBP27.71■■■□□ 2.03
ARHGEF1-217ENST00000598812 CSB-PGBD3P0DP91 1061 aa27.7■■■□□ 2.02
ARHGEF1-217ENST00000598812 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
ARHGEF1-217ENST00000598812 ABCC6O95255 1503 aa27.68■■■□□ 2.02
ARHGEF1-217ENST00000598812 PARP4Q9UKK3 1724 aaKnown RBP27.68■■■□□ 2.02
ARHGEF1-217ENST00000598812 CCER1Q8TC90 406 aaPredicted RBP27.68■■■□□ 2.02
ARHGEF1-217ENST00000598812 TRIM37O94972 964 aa27.66■■■□□ 2.02
ARHGEF1-217ENST00000598812 CDCA8Q53HL2 280 aa27.66■■■□□ 2.02
ARHGEF1-217ENST00000598812 OVOS2A0A0J9YW53 1432 aa27.65■■■□□ 2.02
ARHGEF1-217ENST00000598812 OVOS2Q6IE36 1432 aa27.65■■■□□ 2.02
ARHGEF1-217ENST00000598812 ANKRD36BQ8N2N9 1353 aa27.64■■■□□ 2.02
ARHGEF1-217ENST00000598812 EN1Q05925 392 aaPredicted RBP27.64■■■□□ 2.02
ARHGEF1-217ENST00000598812 DISP2A7MBM2 1401 aa27.64■■■□□ 2.02
ARHGEF1-217ENST00000598812 CDCA7Q9BWT1 371 aaPredicted RBP27.63■■■□□ 2.01
ARHGEF1-217ENST00000598812 CARD10Q9BWT7 1032 aa27.63■■■□□ 2.01
ARHGEF1-217ENST00000598812 LTN1O94822 1766 aa27.63■■■□□ 2.01
ARHGEF1-217ENST00000598812 DDB1Q16531 1140 aa27.62■■■□□ 2.01
ARHGEF1-217ENST00000598812 LRRC37A3O60309 1634 aa27.6■■■□□ 2.01
ARHGEF1-217ENST00000598812 C11orf95C9JLR9 678 aaPredicted RBP27.6■■■□□ 2.01
ARHGEF1-217ENST00000598812 COG3Q96JB2 828 aa27.6■■■□□ 2.01
ARHGEF1-217ENST00000598812 WNK3Q9BYP7 1800 aa27.6■■■□□ 2.01
ARHGEF1-217ENST00000598812 CCDC7Q96M83 1385 aa27.59■■■□□ 2.01
ARHGEF1-217ENST00000598812 APBA3O96018 575 aa27.58■■■□□ 2.01
ARHGEF1-217ENST00000598812 ERBB3P21860 1342 aa27.58■■■□□ 2.01
ARHGEF1-217ENST00000598812 OVOS2A0A0G2JMS6 1433 aa27.58■■■□□ 2
ARHGEF1-217ENST00000598812 NLRP2Q9NX02 1062 aa27.55■■■□□ 2
ARHGEF1-217ENST00000598812 EZH2Q15910 746 aaKnown RBP27.54■■■□□ 2
ARHGEF1-217ENST00000598812 ANKRD24Q8TF21 1146 aa27.54■■■□□ 2
ARHGEF1-217ENST00000598812 R3HDM1Q15032 1099 aaKnown RBP27.53■■■□□ 2
ARHGEF1-217ENST00000598812 PARD3Q8TEW0 1356 aa27.52■■■□□ 2
ARHGEF1-217ENST00000598812 CAMKK2Q96RR4 588 aa27.52■■■□□ 2
ARHGEF1-217ENST00000598812 PEAK1Q9H792 1746 aa27.52■■■□□ 2
ARHGEF1-217ENST00000598812 EXOC5O00471 708 aa27.51■■□□□ 1.99
ARHGEF1-217ENST00000598812 IP6K1Q92551 441 aa27.51■■□□□ 1.99
ARHGEF1-217ENST00000598812 RREB1Q92766 1687 aa27.51■■□□□ 1.99
ARHGEF1-217ENST00000598812 FYB1O15117 783 aa27.49■■□□□ 1.99
ARHGEF1-217ENST00000598812 MARCH10Q8NA82 808 aaPredicted RBP27.49■■□□□ 1.99
ARHGEF1-217ENST00000598812 GGNBP2Q9H3C7 697 aa27.49■■□□□ 1.99
ARHGEF1-217ENST00000598812 MAP3K19Q56UN5 1328 aa27.48■■□□□ 1.99
ARHGEF1-217ENST00000598812 AMPHP49418 695 aa27.48■■□□□ 1.99
ARHGEF1-217ENST00000598812 MYOM1P52179 1685 aa27.47■■□□□ 1.99
ARHGEF1-217ENST00000598812 NUP188Q5SRE5 1749 aa27.47■■□□□ 1.99
ARHGEF1-217ENST00000598812 EIF4G2P78344 907 aaKnown RBP eCLIP27.46■■□□□ 1.993e-7■■□□□ 12.4
ARHGEF1-217ENST00000598812 LTV1Q96GA3 475 aaPredicted RBP27.46■■□□□ 1.99
ARHGEF1-217ENST00000598812 TNS2Q63HR2 1409 aa27.46■■□□□ 1.99
ARHGEF1-217ENST00000598812 IL2RBP14784 551 aa27.45■■□□□ 1.98
ARHGEF1-217ENST00000598812 FBLN1P23142 703 aa27.45■■□□□ 1.98
ARHGEF1-217ENST00000598812 SBF2Q86WG5 1849 aa27.44■■□□□ 1.98
ARHGEF1-217ENST00000598812 KIF20BQ96Q89 1820 aa27.44■■□□□ 1.98
ARHGEF1-217ENST00000598812 BCL9O00512 1426 aa27.43■■□□□ 1.98
ARHGEF1-217ENST00000598812 HOXC9P31274 260 aa27.43■■□□□ 1.98
ARHGEF1-217ENST00000598812 POLR3GLQ9BT43 218 aa27.43■■□□□ 1.98
ARHGEF1-217ENST00000598812 BCL11BQ9C0K0 894 aaPredicted RBP27.43■■□□□ 1.98
ARHGEF1-217ENST00000598812 FAM208AQ9UK61 1670 aaKnown RBP27.43■■□□□ 1.98
ARHGEF1-217ENST00000598812 NSD3Q9BZ95 1437 aa27.42■■□□□ 1.98
ARHGEF1-217ENST00000598812 RTL1A6NKG5 1358 aa27.41■■□□□ 1.98
ARHGEF1-217ENST00000598812 RRS1Q15050 365 aaKnown RBP27.41■■□□□ 1.98
ARHGEF1-217ENST00000598812 CARD14Q9BXL6 1004 aa27.41■■□□□ 1.98
ARHGEF1-217ENST00000598812 HSPA5P11021 654 aaKnown RBP27.4■■□□□ 1.98
ARHGEF1-217ENST00000598812 YY1P25490 414 aa27.37■■□□□ 1.97
ARHGEF1-217ENST00000598812 NBPF14Q5TI25 921 aa27.37■■□□□ 1.97
ARHGEF1-217ENST00000598812 PLSCR1O15162 318 aa27.36■■□□□ 1.97
ARHGEF1-217ENST00000598812 PTF1AQ7RTS3 328 aa27.36■■□□□ 1.97
ARHGEF1-217ENST00000598812 RGPD3A6NKT7 1758 aaPredicted RBP27.35■■□□□ 1.97
ARHGEF1-217ENST00000598812 RGPD4Q7Z3J3 1758 aa27.35■■□□□ 1.97
ARHGEF1-217ENST00000598812 SMG6Q86US8 1419 aaKnown RBP27.34■■□□□ 1.97
ARHGEF1-217ENST00000598812 CGNL1Q0VF96 1302 aa27.34■■□□□ 1.97
ARHGEF1-217ENST00000598812 FLT4P35916 1363 aa27.31■■□□□ 1.96
ARHGEF1-217ENST00000598812 KIF24Q5T7B8 1368 aa27.31■■□□□ 1.96
ARHGEF1-217ENST00000598812 RGPD2P0DJD1 1756 aa27.3■■□□□ 1.96
ARHGEF1-217ENST00000598812 ACSBG1Q96GR2 724 aa27.29■■□□□ 1.96
ARHGEF1-217ENST00000598812 INSRP06213 1382 aa27.29■■□□□ 1.96
ARHGEF1-217ENST00000598812 NHSQ6T4R5 1651 aa27.29■■□□□ 1.96
ARHGEF1-217ENST00000598812 KCNQ2O43526 872 aa27.28■■□□□ 1.96
ARHGEF1-217ENST00000598812 HSP90AB2PQ58FF8 381 aa27.28■■□□□ 1.96
ARHGEF1-217ENST00000598812 DDX54Q8TDD1 881 aaKnown RBP27.28■■□□□ 1.96
ARHGEF1-217ENST00000598812 NBPF6Q5VWK0 638 aa27.27■■□□□ 1.96
ARHGEF1-217ENST00000598812 NBPF4Q96M43 638 aa27.27■■□□□ 1.96
ARHGEF1-217ENST00000598812 KAT6BQ8WYB5 2073 aa27.27■■□□□ 1.96
ARHGEF1-217ENST00000598812 EMILIN1Q9Y6C2 1016 aa27.25■■□□□ 1.95
ARHGEF1-217ENST00000598812 PPM1GO15355 546 aaPredicted RBP27.24■■□□□ 1.95
ARHGEF1-217ENST00000598812 USHBP1Q8N6Y0 703 aa27.24■■□□□ 1.95
ARHGEF1-217ENST00000598812 MEGF6O75095 1541 aa27.24■■□□□ 1.95
ARHGEF1-217ENST00000598812 ZCRB1Q8TBF4 217 aaKnown RBP27.23■■□□□ 1.95
ARHGEF1-217ENST00000598812 RAPGEF4Q8WZA2 1011 aa27.23■■□□□ 1.95
ARHGEF1-217ENST00000598812 PANK3Q9H999 370 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms