RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 RGS12O14924 1447 aa27.46■■□□□ 1.99
IRF3-221ENST00000598808 NSD2O96028 1365 aa27.45■■□□□ 1.99
IRF3-221ENST00000598808 AATKQ6ZMQ8 1374 aa27.44■■□□□ 1.98
IRF3-221ENST00000598808 LMO7Q8WWI1 1683 aa27.44■■□□□ 1.98
IRF3-221ENST00000598808 RRS1Q15050 365 aaKnown RBP27.44■■□□□ 1.98
IRF3-221ENST00000598808 CC2D1BQ5T0F9 858 aaKnown RBP27.44■■□□□ 1.98
IRF3-221ENST00000598808 MORC1Q86VD1 984 aa27.44■■□□□ 1.98
IRF3-221ENST00000598808 CAMTA1Q9Y6Y1 1673 aa27.43■■□□□ 1.98
IRF3-221ENST00000598808 AMPHP49418 695 aa27.43■■□□□ 1.98
IRF3-221ENST00000598808 DIEXFQ68CQ4 756 aaKnown RBP27.42■■□□□ 1.98
IRF3-221ENST00000598808 CSB-PGBD3P0DP91 1061 aa27.41■■□□□ 1.98
IRF3-221ENST00000598808 MAP3K19Q56UN5 1328 aa27.41■■□□□ 1.98
IRF3-221ENST00000598808 RGPD5Q99666 1765 aa27.39■■□□□ 1.98
IRF3-221ENST00000598808 PPM1GO15355 546 aaPredicted RBP27.39■■□□□ 1.98
IRF3-221ENST00000598808 DDX10Q13206 875 aaKnown RBP27.39■■□□□ 1.98
IRF3-221ENST00000598808 VPS72Q15906 364 aa27.39■■□□□ 1.98
IRF3-221ENST00000598808 AMER1Q5JTC6 1135 aaPredicted RBP27.39■■□□□ 1.98
IRF3-221ENST00000598808 COL5A2P05997 1499 aaPredicted RBP27.39■■□□□ 1.98
IRF3-221ENST00000598808 COL18A1P39060 1754 aa27.39■■□□□ 1.97
IRF3-221ENST00000598808 AXIN2Q9Y2T1 843 aa27.38■■□□□ 1.97
IRF3-221ENST00000598808 PER1O15534 1290 aaPredicted RBP27.38■■□□□ 1.97
IRF3-221ENST00000598808 USP35Q9P2H5 1018 aa27.38■■□□□ 1.97
IRF3-221ENST00000598808 ABCC6O95255 1503 aa27.37■■□□□ 1.97
IRF3-221ENST00000598808 GLI3P10071 1580 aa27.37■■□□□ 1.97
IRF3-221ENST00000598808 GJD4Q96KN9 370 aaPredicted RBP27.37■■□□□ 1.97
IRF3-221ENST00000598808 A0A0G2JS52 829 aa27.36■■□□□ 1.97
IRF3-221ENST00000598808 MYT1Q01538 1121 aa27.36■■□□□ 1.97
IRF3-221ENST00000598808 LARP1Q6PKG0 1096 aaKnown RBP27.36■■□□□ 1.97
IRF3-221ENST00000598808 LTV1Q96GA3 475 aaPredicted RBP27.36■■□□□ 1.97
IRF3-221ENST00000598808 TOM1L2Q6ZVM7 507 aa27.34■■□□□ 1.97
IRF3-221ENST00000598808 EMILIN1Q9Y6C2 1016 aa27.34■■□□□ 1.97
IRF3-221ENST00000598808 RTL1A6NKG5 1358 aa27.33■■□□□ 1.97
IRF3-221ENST00000598808 IP6K1Q92551 441 aa27.33■■□□□ 1.97
IRF3-221ENST00000598808 HOXC9P31274 260 aa27.32■■□□□ 1.96
IRF3-221ENST00000598808 BLMP54132 1417 aaPredicted RBP27.32■■□□□ 1.96
IRF3-221ENST00000598808 ANKRD24Q8TF21 1146 aa27.32■■□□□ 1.96
IRF3-221ENST00000598808 MAP2P11137 1827 aaKnown RBP27.31■■□□□ 1.96
IRF3-221ENST00000598808 SPATA31A5Q5VU36 1347 aa27.31■■□□□ 1.96
IRF3-221ENST00000598808 SPATA31A7Q8IWB4 1347 aa27.31■■□□□ 1.96
IRF3-221ENST00000598808 PEAK1Q9H792 1746 aa27.3■■□□□ 1.96
IRF3-221ENST00000598808 FLT4P35916 1363 aa27.3■■□□□ 1.96
IRF3-221ENST00000598808 WDR17Q8IZU2 1322 aa27.3■■□□□ 1.96
IRF3-221ENST00000598808 CRB1P82279 1406 aa27.29■■□□□ 1.96
IRF3-221ENST00000598808 FAM98CQ17RN3 349 aaKnown RBP27.29■■□□□ 1.96
IRF3-221ENST00000598808 SMG6Q86US8 1419 aaKnown RBP27.29■■□□□ 1.96
IRF3-221ENST00000598808 ERBB3P21860 1342 aa27.28■■□□□ 1.96
IRF3-221ENST00000598808 SPATA31A1Q5TZJ5 1347 aa27.28■■□□□ 1.96
IRF3-221ENST00000598808 NLRP2Q9NX02 1062 aa27.28■■□□□ 1.96
IRF3-221ENST00000598808 NPC1L1Q9UHC9 1359 aa27.27■■□□□ 1.96
IRF3-221ENST00000598808 POLKQ9UBT6 870 aa27.26■■□□□ 1.95
IRF3-221ENST00000598808 HSP90AB2PQ58FF8 381 aa27.25■■□□□ 1.95
IRF3-221ENST00000598808 EP400Q96L91 3159 aa27.25■■□□□ 1.95
IRF3-221ENST00000598808 UPF1Q92900 1129 aaKnown RBP eCLIP27.25■■□□□ 1.95
IRF3-221ENST00000598808 KIF24Q5T7B8 1368 aa27.24■■□□□ 1.95
IRF3-221ENST00000598808 TCP11L2Q8N4U5 519 aa27.24■■□□□ 1.95
IRF3-221ENST00000598808 INSRP06213 1382 aa27.22■■□□□ 1.95
IRF3-221ENST00000598808 FAM208AQ9UK61 1670 aaKnown RBP27.21■■□□□ 1.95
IRF3-221ENST00000598808 SEPT12Q8IYM1 358 aa27.2■■□□□ 1.95
IRF3-221ENST00000598808 CARD10Q9BWT7 1032 aa27.2■■□□□ 1.95
IRF3-221ENST00000598808 BRWD3Q6RI45 1802 aa27.2■■□□□ 1.94
IRF3-221ENST00000598808 THRAP3Q9Y2W1 955 aaKnown RBP27.19■■□□□ 1.94
IRF3-221ENST00000598808 RGPD2P0DJD1 1756 aa27.16■■□□□ 1.94
IRF3-221ENST00000598808 MTHFSP49914 203 aa27.16■■□□□ 1.94
IRF3-221ENST00000598808 ONECUT3O60422 494 aaPredicted RBP27.15■■□□□ 1.94
IRF3-221ENST00000598808 BARGINQ6ZT62 677 aa27.15■■□□□ 1.94
IRF3-221ENST00000598808 USHBP1Q8N6Y0 703 aa27.15■■□□□ 1.94
IRF3-221ENST00000598808 WNK3Q9BYP7 1800 aa27.15■■□□□ 1.94
IRF3-221ENST00000598808 THSD7AQ9UPZ6 1657 aa27.14■■□□□ 1.94
IRF3-221ENST00000598808 EIF4A2Q14240 407 aaKnown RBP27.12■■□□□ 1.93
IRF3-221ENST00000598808 NBPF6Q5VWK0 638 aa27.11■■□□□ 1.93
IRF3-221ENST00000598808 NBPF4Q96M43 638 aa27.11■■□□□ 1.93
IRF3-221ENST00000598808 PARD3Q8TEW0 1356 aa27.09■■□□□ 1.93
IRF3-221ENST00000598808 PPP2R1AP30153 589 aa27.09■■□□□ 1.93
IRF3-221ENST00000598808 IL2RBP14784 551 aa27.08■■□□□ 1.93
IRF3-221ENST00000598808 PDE3BQ13370 1112 aa27.08■■□□□ 1.93
IRF3-221ENST00000598808 KRT27Q7Z3Y8 459 aa27.08■■□□□ 1.93
IRF3-221ENST00000598808 CDCA7Q9BWT1 371 aaPredicted RBP27.08■■□□□ 1.93
IRF3-221ENST00000598808 CFAP53Q96M91 514 aa27.07■■□□□ 1.92
IRF3-221ENST00000598808 PARP4Q9UKK3 1724 aaKnown RBP27.07■■□□□ 1.92
IRF3-221ENST00000598808 LRRC37A3O60309 1634 aa27.07■■□□□ 1.92
IRF3-221ENST00000598808 DDB1Q16531 1140 aa27.06■■□□□ 1.92
IRF3-221ENST00000598808 RALBP1Q15311 655 aa27.05■■□□□ 1.92
IRF3-221ENST00000598808 RAPGEF4Q8WZA2 1011 aa27.05■■□□□ 1.92
IRF3-221ENST00000598808 EYA1Q99502 592 aa27.05■■□□□ 1.92
IRF3-221ENST00000598808 DISP2A7MBM2 1401 aa27.05■■□□□ 1.92
IRF3-221ENST00000598808 DIAPH1O60610 1272 aaKnown RBP27.03■■□□□ 1.92
IRF3-221ENST00000598808 FAM182BQ5T319 152 aa27.03■■□□□ 1.92
IRF3-221ENST00000598808 EXOC5O00471 708 aa27.01■■□□□ 1.91
IRF3-221ENST00000598808 MEGF6O75095 1541 aa27.01■■□□□ 1.91
IRF3-221ENST00000598808 TATP17735 454 aaPredicted RBP27■■□□□ 1.91
IRF3-221ENST00000598808 TNS2Q63HR2 1409 aa27■■□□□ 1.91
IRF3-221ENST00000598808 U2SURPO15042 1029 aaKnown RBP27■■□□□ 1.91
IRF3-221ENST00000598808 IL13P35225 146 aa27■■□□□ 1.91
IRF3-221ENST00000598808 IGSF1Q8N6C5 1336 aa26.97■■□□□ 1.91
IRF3-221ENST00000598808 MYBBP1AQ9BQG0 1328 aaKnown RBP26.97■■□□□ 1.91
IRF3-221ENST00000598808 COL3A1P02461 1466 aaPredicted RBP26.97■■□□□ 1.91
IRF3-221ENST00000598808 PRKRIP1Q9H875 184 aaPredicted RBP26.96■■□□□ 1.91
IRF3-221ENST00000598808 OVOS2A0A0G2JMS6 1433 aa26.95■■□□□ 1.91
IRF3-221ENST00000598808 SULT6B1Q6IMI4 303 aa26.95■■□□□ 1.91
IRF3-221ENST00000598808 DDX54Q8TDD1 881 aaKnown RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms