RNA–Protein interactions for RNA: ENST00000598441.5

SNRNP70-206, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP70, Length 1,574 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-206ENST00000598441 AXIN2Q9Y2T1 843 aa31.92■■■□□ 2.7
SNRNP70-206ENST00000598441 FBLN1P23142 703 aa31.91■■■□□ 2.7
SNRNP70-206ENST00000598441 CDK12Q9NYV4 1490 aaPredicted RBP31.91■■■□□ 2.7
SNRNP70-206ENST00000598441 COL5A2P05997 1499 aaPredicted RBP31.9■■■□□ 2.7
SNRNP70-206ENST00000598441 COL18A1P39060 1754 aa31.9■■■□□ 2.7
SNRNP70-206ENST00000598441 LARP1Q6PKG0 1096 aaKnown RBP31.9■■■□□ 2.7
SNRNP70-206ENST00000598441 USP35Q9P2H5 1018 aa31.9■■■□□ 2.7
SNRNP70-206ENST00000598441 SPATA31A5Q5VU36 1347 aa31.89■■■□□ 2.7
SNRNP70-206ENST00000598441 SPATA31A7Q8IWB4 1347 aa31.89■■■□□ 2.7
SNRNP70-206ENST00000598441 GLI3P10071 1580 aa31.89■■■□□ 2.7
SNRNP70-206ENST00000598441 CSB-PGBD3P0DP91 1061 aa31.88■■■□□ 2.69
SNRNP70-206ENST00000598441 AMPHP49418 695 aa31.88■■■□□ 2.69
SNRNP70-206ENST00000598441 RGS12O14924 1447 aa31.88■■■□□ 2.69
SNRNP70-206ENST00000598441 RGPD5Q99666 1765 aa31.87■■■□□ 2.69
SNRNP70-206ENST00000598441 A0A0G2JS52 829 aa31.87■■■□□ 2.69
SNRNP70-206ENST00000598441 MYT1Q01538 1121 aa31.87■■■□□ 2.69
SNRNP70-206ENST00000598441 MAP3K19Q56UN5 1328 aa31.87■■■□□ 2.69
SNRNP70-206ENST00000598441 RRS1Q15050 365 aaKnown RBP31.86■■■□□ 2.69
SNRNP70-206ENST00000598441 ABCC6O95255 1503 aa31.86■■■□□ 2.69
SNRNP70-206ENST00000598441 TOM1L2Q6ZVM7 507 aa31.85■■■□□ 2.69
SNRNP70-206ENST00000598441 NSD2O96028 1365 aa31.85■■■□□ 2.69
SNRNP70-206ENST00000598441 FAM98CQ17RN3 349 aaKnown RBP31.85■■■□□ 2.69
SNRNP70-206ENST00000598441 SPATA31A1Q5TZJ5 1347 aa31.84■■■□□ 2.69
SNRNP70-206ENST00000598441 TNNT2P45379 298 aaPredicted RBP31.83■■■□□ 2.69
SNRNP70-206ENST00000598441 IP6K1Q92551 441 aa31.83■■■□□ 2.69
SNRNP70-206ENST00000598441 WDR17Q8IZU2 1322 aa31.82■■■□□ 2.68
SNRNP70-206ENST00000598441 ANKRD26Q9UPS8 1709 aa31.82■■■□□ 2.68
SNRNP70-206ENST00000598441 MORC1Q86VD1 984 aa31.81■■■□□ 2.68
SNRNP70-206ENST00000598441 CRB1P82279 1406 aa31.81■■■□□ 2.68
SNRNP70-206ENST00000598441 SEPT12Q8IYM1 358 aa31.8■■■□□ 2.68
SNRNP70-206ENST00000598441 PER1O15534 1290 aaPredicted RBP31.79■■■□□ 2.68
SNRNP70-206ENST00000598441 HOXC9P31274 260 aa31.79■■■□□ 2.68
SNRNP70-206ENST00000598441 BLMP54132 1417 aaPredicted RBP31.79■■■□□ 2.68
SNRNP70-206ENST00000598441 PPM1GO15355 546 aaPredicted RBP31.78■■■□□ 2.68
SNRNP70-206ENST00000598441 AMER1Q5JTC6 1135 aaPredicted RBP31.78■■■□□ 2.68
SNRNP70-206ENST00000598441 TCP11L2Q8N4U5 519 aa31.78■■■□□ 2.68
SNRNP70-206ENST00000598441 ANKRD24Q8TF21 1146 aa31.78■■■□□ 2.68
SNRNP70-206ENST00000598441 LTV1Q96GA3 475 aaPredicted RBP31.78■■■□□ 2.68
SNRNP70-206ENST00000598441 RTL1A6NKG5 1358 aa31.77■■■□□ 2.68
SNRNP70-206ENST00000598441 ERBB3P21860 1342 aa31.77■■■□□ 2.68
SNRNP70-206ENST00000598441 SOCS7O14512 581 aa31.77■■■□□ 2.68
SNRNP70-206ENST00000598441 ONECUT3O60422 494 aaPredicted RBP31.77■■■□□ 2.68
SNRNP70-206ENST00000598441 CNGB1Q14028 1251 aaPredicted RBP31.77■■■□□ 2.68
SNRNP70-206ENST00000598441 DDX10Q13206 875 aaKnown RBP31.76■■■□□ 2.67
SNRNP70-206ENST00000598441 NLRP2Q9NX02 1062 aa31.75■■■□□ 2.67
SNRNP70-206ENST00000598441 THRAP3Q9Y2W1 955 aaKnown RBP31.75■■■□□ 2.67
SNRNP70-206ENST00000598441 EMILIN1Q9Y6C2 1016 aa31.75■■■□□ 2.67
SNRNP70-206ENST00000598441 CC2D1BQ5T0F9 858 aaKnown RBP31.74■■■□□ 2.67
SNRNP70-206ENST00000598441 CARD10Q9BWT7 1032 aa31.73■■■□□ 2.67
SNRNP70-206ENST00000598441 FLT4P35916 1363 aa31.72■■■□□ 2.67
SNRNP70-206ENST00000598441 MAP2P11137 1827 aaKnown RBP31.72■■■□□ 2.67
SNRNP70-206ENST00000598441 BARGINQ6ZT62 677 aa31.72■■■□□ 2.67
SNRNP70-206ENST00000598441 KIF24Q5T7B8 1368 aa31.71■■■□□ 2.67
SNRNP70-206ENST00000598441 HSP90AB2PQ58FF8 381 aa31.69■■■□□ 2.66
SNRNP70-206ENST00000598441 POLKQ9UBT6 870 aa31.69■■■□□ 2.66
SNRNP70-206ENST00000598441 SMG6Q86US8 1419 aaKnown RBP31.68■■■□□ 2.66
SNRNP70-206ENST00000598441 BRWD3Q6RI45 1802 aa31.67■■■□□ 2.66
SNRNP70-206ENST00000598441 PEAK1Q9H792 1746 aa31.67■■■□□ 2.66
SNRNP70-206ENST00000598441 INSRP06213 1382 aa31.66■■■□□ 2.66
SNRNP70-206ENST00000598441 KRT27Q7Z3Y8 459 aa31.66■■■□□ 2.66
SNRNP70-206ENST00000598441 THSD7AQ9UPZ6 1657 aa31.65■■■□□ 2.66
SNRNP70-206ENST00000598441 NPC1L1Q9UHC9 1359 aa31.65■■■□□ 2.66
SNRNP70-206ENST00000598441 FAM208AQ9UK61 1670 aaKnown RBP31.62■■■□□ 2.65
SNRNP70-206ENST00000598441 CDCA7Q9BWT1 371 aaPredicted RBP31.62■■■□□ 2.65
SNRNP70-206ENST00000598441 PDE3BQ13370 1112 aa31.61■■■□□ 2.65
SNRNP70-206ENST00000598441 MIER1Q8N108 512 aa31.59■■■□□ 2.65
SNRNP70-206ENST00000598441 DDB1Q16531 1140 aa31.57■■■□□ 2.64
SNRNP70-206ENST00000598441 WNK3Q9BYP7 1800 aa31.56■■■□□ 2.64
SNRNP70-206ENST00000598441 IL2RBP14784 551 aa31.56■■■□□ 2.64
SNRNP70-206ENST00000598441 RGPD2P0DJD1 1756 aa31.55■■■□□ 2.64
SNRNP70-206ENST00000598441 PARP4Q9UKK3 1724 aaKnown RBP31.55■■■□□ 2.64
SNRNP70-206ENST00000598441 NBPF6Q5VWK0 638 aa31.55■■■□□ 2.64
SNRNP70-206ENST00000598441 NBPF4Q96M43 638 aa31.55■■■□□ 2.64
SNRNP70-206ENST00000598441 FAM182BQ5T319 152 aa31.54■■■□□ 2.64
SNRNP70-206ENST00000598441 USHBP1Q8N6Y0 703 aa31.53■■■□□ 2.64
SNRNP70-206ENST00000598441 EXOC5O00471 708 aa31.52■■■□□ 2.64
SNRNP70-206ENST00000598441 DISP2A7MBM2 1401 aa31.51■■■□□ 2.64
SNRNP70-206ENST00000598441 MTHFSP49914 203 aa31.51■■■□□ 2.64
SNRNP70-206ENST00000598441 UPF1Q92900 1129 aaKnown RBP eCLIP31.51■■■□□ 2.64
SNRNP70-206ENST00000598441 EIF4A2Q14240 407 aaKnown RBP31.5■■■□□ 2.63
SNRNP70-206ENST00000598441 LRRC37A3O60309 1634 aa31.49■■■□□ 2.63
SNRNP70-206ENST00000598441 RAPGEF4Q8WZA2 1011 aa31.47■■■□□ 2.63
SNRNP70-206ENST00000598441 FAM196AQ6ZSG2 479 aa31.46■■■□□ 2.63
SNRNP70-206ENST00000598441 EP400Q96L91 3159 aa31.45■■■□□ 2.63
SNRNP70-206ENST00000598441 EYA1Q99502 592 aa31.45■■■□□ 2.63
SNRNP70-206ENST00000598441 TNS2Q63HR2 1409 aa31.43■■■□□ 2.62
SNRNP70-206ENST00000598441 TATP17735 454 aaPredicted RBP31.43■■■□□ 2.62
SNRNP70-206ENST00000598441 SF3B2Q13435 895 aaKnown RBP31.41■■■□□ 2.62
SNRNP70-206ENST00000598441 CCDC125Q86Z20 511 aa31.4■■■□□ 2.62
SNRNP70-206ENST00000598441 MARCH10Q8NA82 808 aaPredicted RBP31.4■■■□□ 2.62
SNRNP70-206ENST00000598441 OVOS2A0A0G2JMS6 1433 aa31.4■■■□□ 2.62
SNRNP70-206ENST00000598441 MEGF6O75095 1541 aa31.39■■■□□ 2.62
SNRNP70-206ENST00000598441 PPP2R1AP30153 589 aa31.39■■■□□ 2.61
SNRNP70-206ENST00000598441 ZCRB1Q8TBF4 217 aaKnown RBP31.38■■■□□ 2.61
SNRNP70-206ENST00000598441 DDX54Q8TDD1 881 aaKnown RBP31.38■■■□□ 2.61
SNRNP70-206ENST00000598441 CFAP53Q96M91 514 aa31.37■■■□□ 2.61
SNRNP70-206ENST00000598441 DIAPH1O60610 1272 aaKnown RBP31.36■■■□□ 2.61
SNRNP70-206ENST00000598441 IL13P35225 146 aa31.36■■■□□ 2.61
SNRNP70-206ENST00000598441 IGSF1Q8N6C5 1336 aa31.35■■■□□ 2.61
SNRNP70-206ENST00000598441 PARD3Q8TEW0 1356 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms