RNA–Protein interactions for RNA: ENST00000597626.5

LINC00649-209, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 612 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-209ENST00000597626 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
LINC00649-209ENST00000597626 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
LINC00649-209ENST00000597626 CPSF1Q10570 1443 aaKnown RBP13.57□□□□□ -0.24
LINC00649-209ENST00000597626 CARD10Q9BWT7 1032 aa13.57□□□□□ -0.24
LINC00649-209ENST00000597626 BCL11BQ9C0K0 894 aaPredicted RBP13.57□□□□□ -0.24
LINC00649-209ENST00000597626 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
LINC00649-209ENST00000597626 EXOC5O00471 708 aa13.56□□□□□ -0.24
LINC00649-209ENST00000597626 SPON1Q9HCB6 807 aa13.56□□□□□ -0.24
LINC00649-209ENST00000597626 RREB1Q92766 1687 aa13.56□□□□□ -0.24
LINC00649-209ENST00000597626 MARCH10Q8NA82 808 aaPredicted RBP13.55□□□□□ -0.24
LINC00649-209ENST00000597626 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
LINC00649-209ENST00000597626 COL18A1P39060 1754 aa13.55□□□□□ -0.24
LINC00649-209ENST00000597626 NUP188Q5SRE5 1749 aa13.54□□□□□ -0.24
LINC00649-209ENST00000597626 KCNQ2O43526 872 aa13.54□□□□□ -0.24
LINC00649-209ENST00000597626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00649-209ENST00000597626 TMC1Q8TDI8 760 aa13.54□□□□□ -0.24
LINC00649-209ENST00000597626 PPP1R1BQ9UD71 204 aaPredicted RBP13.54□□□□□ -0.24
LINC00649-209ENST00000597626 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
LINC00649-209ENST00000597626 SBNO2Q9Y2G9 1366 aa13.54□□□□□ -0.24
LINC00649-209ENST00000597626 AKAP12Q02952 1782 aa13.53□□□□□ -0.24
LINC00649-209ENST00000597626 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
LINC00649-209ENST00000597626 BCL9O00512 1426 aa13.53□□□□□ -0.24
LINC00649-209ENST00000597626 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
LINC00649-209ENST00000597626 USP31Q70CQ4 1352 aa13.52□□□□□ -0.25
LINC00649-209ENST00000597626 LRRC37A3O60309 1634 aa13.52□□□□□ -0.25
LINC00649-209ENST00000597626 PEAK1Q9H792 1746 aa13.52□□□□□ -0.25
LINC00649-209ENST00000597626 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
LINC00649-209ENST00000597626 NME9Q86XW9 330 aa13.5□□□□□ -0.25
LINC00649-209ENST00000597626 PUS7Q96PZ0 661 aaKnown RBP13.5□□□□□ -0.25
LINC00649-209ENST00000597626 SLC12A5Q9H2X9 1139 aa13.5□□□□□ -0.25
LINC00649-209ENST00000597626 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
LINC00649-209ENST00000597626 NFAT5O94916 1531 aa13.49□□□□□ -0.25
LINC00649-209ENST00000597626 ABCC6O95255 1503 aa13.49□□□□□ -0.25
LINC00649-209ENST00000597626 TONSLQ96HA7 1378 aa13.49□□□□□ -0.25
LINC00649-209ENST00000597626 SBF2Q86WG5 1849 aa13.49□□□□□ -0.25
LINC00649-209ENST00000597626 PROM2Q8N271 834 aa13.49□□□□□ -0.25
LINC00649-209ENST00000597626 NLRP2Q9NX02 1062 aa13.49□□□□□ -0.25
LINC00649-209ENST00000597626 RGPD3A6NKT7 1758 aaPredicted RBP13.49□□□□□ -0.25
LINC00649-209ENST00000597626 RGPD4Q7Z3J3 1758 aa13.49□□□□□ -0.25
LINC00649-209ENST00000597626 RGPD5Q99666 1765 aa13.49□□□□□ -0.25
LINC00649-209ENST00000597626 ERBB3P21860 1342 aa13.48□□□□□ -0.25
LINC00649-209ENST00000597626 IL2RBP14784 551 aa13.48□□□□□ -0.25
LINC00649-209ENST00000597626 TXNRD1Q16881 649 aa13.48□□□□□ -0.25
LINC00649-209ENST00000597626 ANO8Q9HCE9 1232 aaPredicted RBP13.48□□□□□ -0.25
LINC00649-209ENST00000597626 STK32BQ9NY57 414 aa13.48□□□□□ -0.25
LINC00649-209ENST00000597626 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
LINC00649-209ENST00000597626 WNK3Q9BYP7 1800 aa13.47□□□□□ -0.25
LINC00649-209ENST00000597626 MON2Q7Z3U7 1717 aa13.47□□□□□ -0.25
LINC00649-209ENST00000597626 NINLQ9Y2I6 1382 aa13.46□□□□□ -0.25
LINC00649-209ENST00000597626 ANKRD24Q8TF21 1146 aa13.46□□□□□ -0.25
LINC00649-209ENST00000597626 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.25
LINC00649-209ENST00000597626 TNS2Q63HR2 1409 aa13.46□□□□□ -0.26
LINC00649-209ENST00000597626 EDC4Q6P2E9 1401 aaKnown RBP13.46□□□□□ -0.26
LINC00649-209ENST00000597626 YY1P25490 414 aa13.45□□□□□ -0.26
LINC00649-209ENST00000597626 SLC15A2Q16348 729 aa13.45□□□□□ -0.26
LINC00649-209ENST00000597626 ACSBG1Q96GR2 724 aa13.45□□□□□ -0.26
LINC00649-209ENST00000597626 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
LINC00649-209ENST00000597626 A0A1W2PP64 1363 aa13.44□□□□□ -0.26
LINC00649-209ENST00000597626 IP6K1Q92551 441 aa13.43□□□□□ -0.26
LINC00649-209ENST00000597626 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
LINC00649-209ENST00000597626 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
LINC00649-209ENST00000597626 COG3Q96JB2 828 aa13.42□□□□□ -0.26
LINC00649-209ENST00000597626 ATF5Q9Y2D1 282 aaPredicted RBP13.42□□□□□ -0.26
LINC00649-209ENST00000597626 ST20-MTHFSA0A0A6YYL1 179 aa13.41□□□□□ -0.26
LINC00649-209ENST00000597626 LTV1Q96GA3 475 aaPredicted RBP13.41□□□□□ -0.26
LINC00649-209ENST00000597626 LTN1O94822 1766 aa13.4□□□□□ -0.26
LINC00649-209ENST00000597626 PTGER2P43116 358 aa13.4□□□□□ -0.26
LINC00649-209ENST00000597626 AMPHP49418 695 aa13.4□□□□□ -0.26
LINC00649-209ENST00000597626 TESK2Q96S53 571 aa13.4□□□□□ -0.26
LINC00649-209ENST00000597626 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
LINC00649-209ENST00000597626 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
LINC00649-209ENST00000597626 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
LINC00649-209ENST00000597626 NHSQ6T4R5 1651 aa13.38□□□□□ -0.27
LINC00649-209ENST00000597626 HOXC9P31274 260 aa13.37□□□□□ -0.27
LINC00649-209ENST00000597626 TMF1P82094 1093 aa13.37□□□□□ -0.27
LINC00649-209ENST00000597626 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
LINC00649-209ENST00000597626 SLC27A3Q5K4L6 730 aa13.36□□□□□ -0.27
LINC00649-209ENST00000597626 SYT17Q9BSW7 474 aa13.36□□□□□ -0.27
LINC00649-209ENST00000597626 FHDC1Q9C0D6 1143 aaPredicted RBP13.36□□□□□ -0.27
LINC00649-209ENST00000597626 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
LINC00649-209ENST00000597626 ANKRD36BQ8N2N9 1353 aa13.35□□□□□ -0.27
LINC00649-209ENST00000597626 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
LINC00649-209ENST00000597626 FBLN1P23142 703 aa13.34□□□□□ -0.27
LINC00649-209ENST00000597626 CDCA8Q53HL2 280 aa13.34□□□□□ -0.27
LINC00649-209ENST00000597626 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
LINC00649-209ENST00000597626 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
LINC00649-209ENST00000597626 ARXQ96QS3 562 aa13.34□□□□□ -0.27
LINC00649-209ENST00000597626 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
LINC00649-209ENST00000597626 LRRC4BQ9NT99 713 aa13.34□□□□□ -0.27
LINC00649-209ENST00000597626 FYB1O15117 783 aa13.33□□□□□ -0.28
LINC00649-209ENST00000597626 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
LINC00649-209ENST00000597626 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
LINC00649-209ENST00000597626 BTAF1O14981 1849 aa13.33□□□□□ -0.28
LINC00649-209ENST00000597626 MYOM1P52179 1685 aa13.33□□□□□ -0.28
LINC00649-209ENST00000597626 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
LINC00649-209ENST00000597626 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
LINC00649-209ENST00000597626 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
LINC00649-209ENST00000597626 GGNBP2Q9H3C7 697 aa13.32□□□□□ -0.28
LINC00649-209ENST00000597626 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
LINC00649-209ENST00000597626 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms