RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 USP54Q70EL1 1684 aa21.53■■□□□ 1.04
TGFB1-202ENST00000597453 PEAK1Q9H792 1746 aa21.52■■□□□ 1.04
TGFB1-202ENST00000597453 KCNH5Q8NCM2 988 aa21.52■■□□□ 1.04
TGFB1-202ENST00000597453 CAMKK2Q96RR4 588 aa21.52■■□□□ 1.04
TGFB1-202ENST00000597453 RREB1Q92766 1687 aa21.51■■□□□ 1.03
TGFB1-202ENST00000597453 TOM1L2Q6ZVM7 507 aa21.51■■□□□ 1.03
TGFB1-202ENST00000597453 WDR17Q8IZU2 1322 aa21.51■■□□□ 1.03
TGFB1-202ENST00000597453 APBA3O96018 575 aa21.5■■□□□ 1.03
TGFB1-202ENST00000597453 PCGF6Q9BYE7 350 aa21.5■■□□□ 1.03
TGFB1-202ENST00000597453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.49■■□□□ 1.03
TGFB1-202ENST00000597453 TMC1Q8TDI8 760 aa21.49■■□□□ 1.03
TGFB1-202ENST00000597453 SBF2Q86WG5 1849 aa21.49■■□□□ 1.03
TGFB1-202ENST00000597453 NUP188Q5SRE5 1749 aa21.49■■□□□ 1.03
TGFB1-202ENST00000597453 SLC12A5Q9H2X9 1139 aa21.48■■□□□ 1.03
TGFB1-202ENST00000597453 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
TGFB1-202ENST00000597453 LTN1O94822 1766 aa21.47■■□□□ 1.03
TGFB1-202ENST00000597453 R3HDM1Q15032 1099 aaKnown RBP21.47■■□□□ 1.03
TGFB1-202ENST00000597453 NME9Q86XW9 330 aa21.47■■□□□ 1.03
TGFB1-202ENST00000597453 ABCC6O95255 1503 aa21.46■■□□□ 1.03
TGFB1-202ENST00000597453 PARD3Q8TEW0 1356 aa21.46■■□□□ 1.03
TGFB1-202ENST00000597453 OVOS2A0A0G2JMS6 1433 aa21.46■■□□□ 1.03
TGFB1-202ENST00000597453 OVOS2A0A0J9YW53 1432 aa21.46■■□□□ 1.03
TGFB1-202ENST00000597453 OVOS2Q6IE36 1432 aa21.46■■□□□ 1.03
TGFB1-202ENST00000597453 DDB1Q16531 1140 aa21.44■■□□□ 1.02
TGFB1-202ENST00000597453 TESK2Q96S53 571 aa21.44■■□□□ 1.02
TGFB1-202ENST00000597453 A0A1W2PP64 1363 aa21.44■■□□□ 1.02
TGFB1-202ENST00000597453 CSB-PGBD3P0DP91 1061 aa21.43■■□□□ 1.02
TGFB1-202ENST00000597453 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
TGFB1-202ENST00000597453 CARD10Q9BWT7 1032 aa21.43■■□□□ 1.02
TGFB1-202ENST00000597453 EDC4Q6P2E9 1401 aaKnown RBP21.43■■□□□ 1.02
TGFB1-202ENST00000597453 ST20-MTHFSA0A0A6YYL1 179 aa21.42■■□□□ 1.02
TGFB1-202ENST00000597453 PUS7Q96PZ0 661 aaKnown RBP21.41■■□□□ 1.02
TGFB1-202ENST00000597453 RGPD3A6NKT7 1758 aaPredicted RBP21.41■■□□□ 1.02
TGFB1-202ENST00000597453 RGPD4Q7Z3J3 1758 aa21.41■■□□□ 1.02
TGFB1-202ENST00000597453 MARCH10Q8NA82 808 aaPredicted RBP21.4■■□□□ 1.02
TGFB1-202ENST00000597453 C11orf95C9JLR9 678 aaPredicted RBP21.39■■□□□ 1.01
TGFB1-202ENST00000597453 CDCA7Q9BWT1 371 aaPredicted RBP21.39■■□□□ 1.01
TGFB1-202ENST00000597453 TERF2IPQ9NYB0 399 aa21.39■■□□□ 1.01
TGFB1-202ENST00000597453 PTF1AQ7RTS3 328 aa21.38■■□□□ 1.01
TGFB1-202ENST00000597453 CCDC7Q96M83 1385 aa21.37■■□□□ 1.01
TGFB1-202ENST00000597453 ERBB3P21860 1342 aa21.37■■□□□ 1.01
TGFB1-202ENST00000597453 NINLQ9Y2I6 1382 aa21.36■■□□□ 1.01
TGFB1-202ENST00000597453 BCL9O00512 1426 aa21.35■■□□□ 1.01
TGFB1-202ENST00000597453 TNS2Q63HR2 1409 aa21.34■■□□□ 1.01
TGFB1-202ENST00000597453 BCL11BQ9C0K0 894 aaPredicted RBP21.33■■□□□ 1.01
TGFB1-202ENST00000597453 USP47Q96K76 1375 aa21.33■■□□□ 1
TGFB1-202ENST00000597453 EXOC5O00471 708 aa21.32■■□□□ 1
TGFB1-202ENST00000597453 NBPF14Q5TI25 921 aa21.32■■□□□ 1
TGFB1-202ENST00000597453 ANKRD24Q8TF21 1146 aa21.32■■□□□ 1
TGFB1-202ENST00000597453 NLRP2Q9NX02 1062 aa21.32■■□□□ 1
TGFB1-202ENST00000597453 CLSPNQ9HAW4 1339 aa21.31■■□□□ 1
TGFB1-202ENST00000597453 PLSCR1O15162 318 aa21.31■■□□□ 1
TGFB1-202ENST00000597453 NHSQ6T4R5 1651 aa21.29■■□□□ 1
TGFB1-202ENST00000597453 FAM208AQ9UK61 1670 aaKnown RBP21.29■■□□□ 1
TGFB1-202ENST00000597453 ANKRD36BQ8N2N9 1353 aa21.29■■□□□ 1
TGFB1-202ENST00000597453 SLC24A1O60721 1099 aa21.29■■□□□ 1
TGFB1-202ENST00000597453 RGPD2P0DJD1 1756 aa21.26■□□□□ 0.99
TGFB1-202ENST00000597453 IL2RBP14784 551 aa21.26■□□□□ 0.99
TGFB1-202ENST00000597453 FBLN1P23142 703 aa21.26■□□□□ 0.99
TGFB1-202ENST00000597453 TMF1P82094 1093 aa21.26■□□□□ 0.99
TGFB1-202ENST00000597453 PROM2Q8N271 834 aa21.26■□□□□ 0.99
TGFB1-202ENST00000597453 IP6K1Q92551 441 aa21.26■□□□□ 0.99
TGFB1-202ENST00000597453 COG3Q96JB2 828 aa21.26■□□□□ 0.99
TGFB1-202ENST00000597453 ANO8Q9HCE9 1232 aaPredicted RBP21.26■□□□□ 0.99
TGFB1-202ENST00000597453 KCNQ2O43526 872 aa21.25■□□□□ 0.99
TGFB1-202ENST00000597453 MAP3K19Q56UN5 1328 aa21.25■□□□□ 0.99
TGFB1-202ENST00000597453 CASZ1Q86V15 1759 aa21.24■□□□□ 0.99
TGFB1-202ENST00000597453 LTV1Q96GA3 475 aaPredicted RBP21.24■□□□□ 0.99
TGFB1-202ENST00000597453 KIF20BQ96Q89 1820 aa21.24■□□□□ 0.99
TGFB1-202ENST00000597453 MYOM1P52179 1685 aa21.24■□□□□ 0.99
TGFB1-202ENST00000597453 KAT6BQ8WYB5 2073 aa21.24■□□□□ 0.99
TGFB1-202ENST00000597453 ACSBG1Q96GR2 724 aa21.23■□□□□ 0.99
TGFB1-202ENST00000597453 BTAF1O14981 1849 aa21.22■□□□□ 0.99
TGFB1-202ENST00000597453 HOXC9P31274 260 aa21.21■□□□□ 0.99
TGFB1-202ENST00000597453 FYB1O15117 783 aa21.2■□□□□ 0.98
TGFB1-202ENST00000597453 TXNRD1Q16881 649 aa21.2■□□□□ 0.98
TGFB1-202ENST00000597453 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
TGFB1-202ENST00000597453 SHANK3Q9BYB0 1731 aa21.19■□□□□ 0.98
TGFB1-202ENST00000597453 AMPHP49418 695 aa21.19■□□□□ 0.98
TGFB1-202ENST00000597453 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
TGFB1-202ENST00000597453 PDGFDQ9GZP0 370 aaPredicted RBP21.18■□□□□ 0.98
TGFB1-202ENST00000597453 SPON1Q9HCB6 807 aa21.18■□□□□ 0.98
TGFB1-202ENST00000597453 RRS1Q15050 365 aaKnown RBP21.17■□□□□ 0.98
TGFB1-202ENST00000597453 TIMELESSQ9UNS1 1208 aa21.17■□□□□ 0.98
TGFB1-202ENST00000597453 PAPPAQ13219 1627 aa21.16■□□□□ 0.98
TGFB1-202ENST00000597453 RTL1A6NKG5 1358 aa21.16■□□□□ 0.98
TGFB1-202ENST00000597453 CDCA8Q53HL2 280 aa21.15■□□□□ 0.98
TGFB1-202ENST00000597453 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
TGFB1-202ENST00000597453 MEGF6O75095 1541 aa21.14■□□□□ 0.98
TGFB1-202ENST00000597453 DDX54Q8TDD1 881 aaKnown RBP21.14■□□□□ 0.97
TGFB1-202ENST00000597453 CARD14Q9BXL6 1004 aa21.14■□□□□ 0.97
TGFB1-202ENST00000597453 STK32BQ9NY57 414 aa21.13■□□□□ 0.97
TGFB1-202ENST00000597453 SLC15A2Q16348 729 aa21.12■□□□□ 0.97
TGFB1-202ENST00000597453 NSD3Q9BZ95 1437 aa21.12■□□□□ 0.97
TGFB1-202ENST00000597453 PPP1R1BQ9UD71 204 aaPredicted RBP21.11■□□□□ 0.97
TGFB1-202ENST00000597453 ZBTB7AO95365 584 aa21.1■□□□□ 0.97
TGFB1-202ENST00000597453 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
TGFB1-202ENST00000597453 USHBP1Q8N6Y0 703 aa21.1■□□□□ 0.97
TGFB1-202ENST00000597453 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
TGFB1-202ENST00000597453 HSP90AB2PQ58FF8 381 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms