RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
PDE4C-210ENST00000597297 CHRNA2Q15822 529 aa15.62■□□□□ 0.09
PDE4C-210ENST00000597297 UNC5CLQ8IV45 518 aa15.62■□□□□ 0.09
PDE4C-210ENST00000597297 RXRBP28702 533 aa15.62■□□□□ 0.09
PDE4C-210ENST00000597297 PRDM11Q9NQV5 511 aa15.62■□□□□ 0.09
PDE4C-210ENST00000597297 PIK3C2AO00443 1686 aa15.61■□□□□ 0.09
PDE4C-210ENST00000597297 SLIT2O94813 1529 aa15.61■□□□□ 0.09
PDE4C-210ENST00000597297 KIAA0232Q92628 1395 aa15.61■□□□□ 0.09
PDE4C-210ENST00000597297 COL3A1P02461 1466 aaPredicted RBP15.61■□□□□ 0.09
PDE4C-210ENST00000597297 MAP2P11137 1827 aaKnown RBP15.61■□□□□ 0.09
PDE4C-210ENST00000597297 FKBP8Q14318 412 aa15.61■□□□□ 0.09
PDE4C-210ENST00000597297 BTG4Q9NY30 223 aa15.61■□□□□ 0.09
PDE4C-210ENST00000597297 TRPC5Q9UL62 973 aaPredicted RBP15.61■□□□□ 0.09
PDE4C-210ENST00000597297 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
PDE4C-210ENST00000597297 PHRF1Q9P1Y6 1649 aaKnown RBP15.6■□□□□ 0.09
PDE4C-210ENST00000597297 SOX12O15370 315 aa15.6■□□□□ 0.09
PDE4C-210ENST00000597297 RBM6P78332 1123 aaKnown RBP15.59■□□□□ 0.09
PDE4C-210ENST00000597297 USP31Q70CQ4 1352 aa15.58■□□□□ 0.09
PDE4C-210ENST00000597297 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.09
PDE4C-210ENST00000597297 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.08
PDE4C-210ENST00000597297 ATRNO75882 1429 aa15.57■□□□□ 0.08
PDE4C-210ENST00000597297 KCNH5Q8NCM2 988 aa15.57■□□□□ 0.08
PDE4C-210ENST00000597297 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
PDE4C-210ENST00000597297 CPDO75976 1380 aa15.56■□□□□ 0.08
PDE4C-210ENST00000597297 SLIT3O75094 1523 aa15.56■□□□□ 0.08
PDE4C-210ENST00000597297 ARHGEF25Q86VW2 580 aa15.56■□□□□ 0.08
PDE4C-210ENST00000597297 COL14A1Q05707 1796 aaKnown RBP15.55■□□□□ 0.08
PDE4C-210ENST00000597297 AATKQ6ZMQ8 1374 aa15.55■□□□□ 0.08
PDE4C-210ENST00000597297 PLCH1Q4KWH8 1693 aa15.55■□□□□ 0.08
PDE4C-210ENST00000597297 FBLN1P23142 703 aa15.55■□□□□ 0.08
PDE4C-210ENST00000597297 VPS72Q15906 364 aa15.55■□□□□ 0.08
PDE4C-210ENST00000597297 ZNF521Q96K83 1311 aa15.55■□□□□ 0.08
PDE4C-210ENST00000597297 NGEFQ8N5V2 710 aa15.54■□□□□ 0.08
PDE4C-210ENST00000597297 COG3Q96JB2 828 aa15.54■□□□□ 0.08
PDE4C-210ENST00000597297 AXIN2Q9Y2T1 843 aa15.54■□□□□ 0.08
PDE4C-210ENST00000597297 NWD2Q9ULI1 1742 aa15.54■□□□□ 0.08
PDE4C-210ENST00000597297 APAF1O14727 1248 aa15.53■□□□□ 0.08
PDE4C-210ENST00000597297 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
PDE4C-210ENST00000597297 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
PDE4C-210ENST00000597297 OVOS2A0A0J9YW53 1432 aa15.53■□□□□ 0.08
PDE4C-210ENST00000597297 OVOS2Q6IE36 1432 aa15.53■□□□□ 0.08
PDE4C-210ENST00000597297 CAMTA1Q9Y6Y1 1673 aa15.53■□□□□ 0.08
PDE4C-210ENST00000597297 CDK12Q9NYV4 1490 aaPredicted RBP15.53■□□□□ 0.08
PDE4C-210ENST00000597297 EVA1CP58658 441 aa15.53■□□□□ 0.08
PDE4C-210ENST00000597297 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
PDE4C-210ENST00000597297 CDCA7LQ96GN5 454 aa15.53■□□□□ 0.08
PDE4C-210ENST00000597297 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.52■□□□□ 0.08
PDE4C-210ENST00000597297 POLKQ9UBT6 870 aa15.52■□□□□ 0.07
PDE4C-210ENST00000597297 SOCS7O14512 581 aa15.51■□□□□ 0.07
PDE4C-210ENST00000597297 U2AF1L5P0DN76 240 aaPredicted RBP15.51■□□□□ 0.07
PDE4C-210ENST00000597297 U2AF1Q01081 240 aaKnown RBP eCLIP15.51■□□□□ 0.07
PDE4C-210ENST00000597297 RNF123Q5XPI4 1314 aa15.51■□□□□ 0.07
PDE4C-210ENST00000597297 USP54Q70EL1 1684 aa15.5■□□□□ 0.07
PDE4C-210ENST00000597297 NRAPQ86VF7 1730 aa15.5■□□□□ 0.07
PDE4C-210ENST00000597297 DIAPH1O60610 1272 aaKnown RBP15.5■□□□□ 0.07
PDE4C-210ENST00000597297 LARP1Q6PKG0 1096 aaKnown RBP15.5■□□□□ 0.07
PDE4C-210ENST00000597297 NFAT5O94916 1531 aa15.5■□□□□ 0.07
PDE4C-210ENST00000597297 COL18A1P39060 1754 aa15.5■□□□□ 0.07
PDE4C-210ENST00000597297 GOLGA2Q08379 1002 aa15.49■□□□□ 0.07
PDE4C-210ENST00000597297 SPATA31A5Q5VU36 1347 aa15.49■□□□□ 0.07
PDE4C-210ENST00000597297 SPATA31A7Q8IWB4 1347 aa15.49■□□□□ 0.07
PDE4C-210ENST00000597297 GLI3P10071 1580 aa15.49■□□□□ 0.07
PDE4C-210ENST00000597297 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
PDE4C-210ENST00000597297 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
PDE4C-210ENST00000597297 LMO7Q8WWI1 1683 aa15.49■□□□□ 0.07
PDE4C-210ENST00000597297 RGPD5Q99666 1765 aa15.48■□□□□ 0.07
PDE4C-210ENST00000597297 U2SURPO15042 1029 aaKnown RBP15.48■□□□□ 0.07
PDE4C-210ENST00000597297 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
PDE4C-210ENST00000597297 USP35Q9P2H5 1018 aa15.48■□□□□ 0.07
PDE4C-210ENST00000597297 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
PDE4C-210ENST00000597297 RGS12O14924 1447 aa15.47■□□□□ 0.07
PDE4C-210ENST00000597297 SPATA31A1Q5TZJ5 1347 aa15.47■□□□□ 0.07
PDE4C-210ENST00000597297 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
PDE4C-210ENST00000597297 FAM98CQ17RN3 349 aaKnown RBP15.47■□□□□ 0.07
PDE4C-210ENST00000597297 TCP11L2Q8N4U5 519 aa15.47■□□□□ 0.07
PDE4C-210ENST00000597297 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
PDE4C-210ENST00000597297 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
PDE4C-210ENST00000597297 SEPT12Q8IYM1 358 aa15.46■□□□□ 0.07
PDE4C-210ENST00000597297 RCAN3Q9UKA8 241 aa15.46■□□□□ 0.07
PDE4C-210ENST00000597297 PEAK1Q9H792 1746 aa15.46■□□□□ 0.06
PDE4C-210ENST00000597297 MAP3K19Q56UN5 1328 aa15.45■□□□□ 0.06
PDE4C-210ENST00000597297 SLFN5Q08AF3 891 aa15.45■□□□□ 0.06
PDE4C-210ENST00000597297 COL5A2P05997 1499 aaPredicted RBP15.45■□□□□ 0.06
PDE4C-210ENST00000597297 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
PDE4C-210ENST00000597297 IP6K1Q92551 441 aa15.45■□□□□ 0.06
PDE4C-210ENST00000597297 PLEKHF1Q96S99 279 aa15.45■□□□□ 0.06
PDE4C-210ENST00000597297 LTN1O94822 1766 aa15.44■□□□□ 0.06
PDE4C-210ENST00000597297 TOM1L2Q6ZVM7 507 aa15.44■□□□□ 0.06
PDE4C-210ENST00000597297 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
PDE4C-210ENST00000597297 TRMT2AQ8IZ69 625 aaKnown RBP15.44■□□□□ 0.06
PDE4C-210ENST00000597297 PNNQ9H307 717 aaKnown RBP15.44■□□□□ 0.06
PDE4C-210ENST00000597297 E9PSI1 815 aa15.43■□□□□ 0.06
PDE4C-210ENST00000597297 AMPHP49418 695 aa15.43■□□□□ 0.06
PDE4C-210ENST00000597297 CCDC27Q2M243 656 aa15.43■□□□□ 0.06
PDE4C-210ENST00000597297 RRP7AQ9Y3A4 280 aaKnown RBP15.43■□□□□ 0.06
PDE4C-210ENST00000597297 WDR17Q8IZU2 1322 aa15.42■□□□□ 0.06
PDE4C-210ENST00000597297 MAPK8IP3Q9UPT6 1336 aa15.42■□□□□ 0.06
PDE4C-210ENST00000597297 CSB-PGBD3P0DP91 1061 aa15.42■□□□□ 0.06
PDE4C-210ENST00000597297 IL13P35225 146 aa15.42■□□□□ 0.06
PDE4C-210ENST00000597297 HOXC9P31274 260 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms