RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 ABCC6O95255 1503 aa15.21■□□□□ 0.03
PNKP-208ENST00000596624 LRRC37A3O60309 1634 aa15.21■□□□□ 0.02
PNKP-208ENST00000596624 OVOS2A0A0G2JMS6 1433 aa15.2■□□□□ 0.02
PNKP-208ENST00000596624 OVOS2A0A0J9YW53 1432 aa15.2■□□□□ 0.02
PNKP-208ENST00000596624 OVOS2Q6IE36 1432 aa15.2■□□□□ 0.02
PNKP-208ENST00000596624 USP54Q70EL1 1684 aa15.2■□□□□ 0.02
PNKP-208ENST00000596624 PLSCR1O15162 318 aa15.2■□□□□ 0.02
PNKP-208ENST00000596624 KCNH5Q8NCM2 988 aa15.2■□□□□ 0.02
PNKP-208ENST00000596624 CDCA7Q9BWT1 371 aaPredicted RBP15.2■□□□□ 0.02
PNKP-208ENST00000596624 NFAT5O94916 1531 aa15.2■□□□□ 0.02
PNKP-208ENST00000596624 USP31Q70CQ4 1352 aa15.19■□□□□ 0.02
PNKP-208ENST00000596624 WNK3Q9BYP7 1800 aa15.19■□□□□ 0.02
PNKP-208ENST00000596624 CARD10Q9BWT7 1032 aa15.18■□□□□ 0.02
PNKP-208ENST00000596624 MON2Q7Z3U7 1717 aa15.17■□□□□ 0.02
PNKP-208ENST00000596624 CD163L1Q9NR16 1453 aa15.17■□□□□ 0.02
PNKP-208ENST00000596624 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
PNKP-208ENST00000596624 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
PNKP-208ENST00000596624 DDB1Q16531 1140 aa15.16■□□□□ 0.02
PNKP-208ENST00000596624 TOM1L2Q6ZVM7 507 aa15.16■□□□□ 0.02
PNKP-208ENST00000596624 NBPF14Q5TI25 921 aa15.15■□□□□ 0.02
PNKP-208ENST00000596624 MARCH10Q8NA82 808 aaPredicted RBP15.15■□□□□ 0.02
PNKP-208ENST00000596624 BCL11BQ9C0K0 894 aaPredicted RBP15.15■□□□□ 0.02
PNKP-208ENST00000596624 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
PNKP-208ENST00000596624 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
PNKP-208ENST00000596624 CCDC7Q96M83 1385 aa15.13■□□□□ 0.01
PNKP-208ENST00000596624 PROM2Q8N271 834 aa15.12■□□□□ 0.01
PNKP-208ENST00000596624 PTF1AQ7RTS3 328 aa15.11■□□□□ 0.01
PNKP-208ENST00000596624 CARD11Q9BXL7 1154 aa15.1■□□□□ 0.01
PNKP-208ENST00000596624 ERBB3P21860 1342 aa15.1■□□□□ 0.01
PNKP-208ENST00000596624 EDC4Q6P2E9 1401 aaKnown RBP15.09■□□□□ 0.01
PNKP-208ENST00000596624 CASZ1Q86V15 1759 aa15.09■□□□□ 0.01
PNKP-208ENST00000596624 ZBTB7CA1YPR0 619 aa15.09■□□□□ 0.01
PNKP-208ENST00000596624 KCNQ2O43526 872 aa15.09■□□□□ 0.01
PNKP-208ENST00000596624 TNS2Q63HR2 1409 aa15.09■□□□□ 0.01
PNKP-208ENST00000596624 EXOC5O00471 708 aa15.08■□□□□ 0
PNKP-208ENST00000596624 SPON1Q9HCB6 807 aa15.08■□□□□ 0
PNKP-208ENST00000596624 ANO8Q9HCE9 1232 aaPredicted RBP15.08■□□□□ 0
PNKP-208ENST00000596624 NME9Q86XW9 330 aa15.07■□□□□ 0
PNKP-208ENST00000596624 TESK2Q96S53 571 aa15.07■□□□□ 0
PNKP-208ENST00000596624 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
PNKP-208ENST00000596624 NINLQ9Y2I6 1382 aa15.06■□□□□ 0
PNKP-208ENST00000596624 LTN1O94822 1766 aa15.06■□□□□ 0
PNKP-208ENST00000596624 CSB-PGBD3P0DP91 1061 aa15.05■□□□□ -0
PNKP-208ENST00000596624 HDGFL2Q7Z4V5 671 aaPredicted RBP15.05■□□□□ -0
PNKP-208ENST00000596624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ -0
PNKP-208ENST00000596624 A0A1W2PP64 1363 aa15.05■□□□□ -0
PNKP-208ENST00000596624 NHSQ6T4R5 1651 aa15.05■□□□□ -0
PNKP-208ENST00000596624 SOX12O15370 315 aa15.04■□□□□ -0
PNKP-208ENST00000596624 SLC24A1O60721 1099 aa15.04■□□□□ -0
PNKP-208ENST00000596624 TERF2IPQ9NYB0 399 aa15.04■□□□□ -0
PNKP-208ENST00000596624 TXNRD1Q16881 649 aa15.03■□□□□ -0
PNKP-208ENST00000596624 TONSLQ96HA7 1378 aa15.02■□□□□ -0
PNKP-208ENST00000596624 IL2RBP14784 551 aa15.02■□□□□ -0
PNKP-208ENST00000596624 ANKRD24Q8TF21 1146 aa15.01□□□□□ -0.01
PNKP-208ENST00000596624 IP6K1Q92551 441 aa15.01□□□□□ -0.01
PNKP-208ENST00000596624 PAPPAQ13219 1627 aa15□□□□□ -0.01
PNKP-208ENST00000596624 PTGER2P43116 358 aa15□□□□□ -0.01
PNKP-208ENST00000596624 SLC15A2Q16348 729 aa15□□□□□ -0.01
PNKP-208ENST00000596624 TMC1Q8TDI8 760 aa15□□□□□ -0.01
PNKP-208ENST00000596624 PDGFDQ9GZP0 370 aaPredicted RBP15□□□□□ -0.01
PNKP-208ENST00000596624 FAM208AQ9UK61 1670 aaKnown RBP15□□□□□ -0.01
PNKP-208ENST00000596624 SGIP1Q9BQI5 828 aa14.99□□□□□ -0.01
PNKP-208ENST00000596624 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
PNKP-208ENST00000596624 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
PNKP-208ENST00000596624 BTAF1O14981 1849 aa14.97□□□□□ -0.01
PNKP-208ENST00000596624 STK32BQ9NY57 414 aa14.97□□□□□ -0.01
PNKP-208ENST00000596624 ANKRD36BQ8N2N9 1353 aa14.97□□□□□ -0.01
PNKP-208ENST00000596624 PPP1R1BQ9UD71 204 aaPredicted RBP14.96□□□□□ -0.01
PNKP-208ENST00000596624 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
PNKP-208ENST00000596624 MTFR1LQ9H019 292 aa14.95□□□□□ -0.02
PNKP-208ENST00000596624 MYOM1P52179 1685 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 COL24A1Q17RW2 1714 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 QSER1Q2KHR3 1735 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 ZBTB7AO95365 584 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 HOXC9P31274 260 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 ACSBG1Q96GR2 724 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 COG3Q96JB2 828 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 LRRC4BQ9NT99 713 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 RTL1A6NKG5 1358 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 MAP3K5Q99683 1374 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 KAT6BQ8WYB5 2073 aa14.93□□□□□ -0.02
PNKP-208ENST00000596624 UTRNP46939 3433 aa14.92□□□□□ -0.02
PNKP-208ENST00000596624 FYB1O15117 783 aa14.92□□□□□ -0.02
PNKP-208ENST00000596624 YY1P25490 414 aa14.92□□□□□ -0.02
PNKP-208ENST00000596624 SLC27A3Q5K4L6 730 aa14.92□□□□□ -0.02
PNKP-208ENST00000596624 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
PNKP-208ENST00000596624 SHANK3Q9BYB0 1731 aa14.92□□□□□ -0.02
PNKP-208ENST00000596624 NSD2O96028 1365 aa14.9□□□□□ -0.02
PNKP-208ENST00000596624 SYT17Q9BSW7 474 aa14.9□□□□□ -0.02
PNKP-208ENST00000596624 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
PNKP-208ENST00000596624 CGNL1Q0VF96 1302 aa14.9□□□□□ -0.02
PNKP-208ENST00000596624 KIF24Q5T7B8 1368 aa14.89□□□□□ -0.03
PNKP-208ENST00000596624 RGPD2P0DJD1 1756 aa14.89□□□□□ -0.03
PNKP-208ENST00000596624 FBLN1P23142 703 aa14.89□□□□□ -0.03
PNKP-208ENST00000596624 ZNF827Q17R98 1081 aa14.89□□□□□ -0.03
PNKP-208ENST00000596624 SLC16A10Q8TF71 515 aa14.89□□□□□ -0.03
PNKP-208ENST00000596624 LY75O60449 1722 aa14.89□□□□□ -0.03
PNKP-208ENST00000596624 USP47Q96K76 1375 aa14.88□□□□□ -0.03
PNKP-208ENST00000596624 MEGF6O75095 1541 aa14.88□□□□□ -0.03
PNKP-208ENST00000596624 DCAF8L1A6NGE4 600 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms