RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 CCDC9Q9Y3X0 531 aaKnown RBP27.38■■□□□ 1.97
CCDC61-205ENST00000596161 STRN4Q9NRL3 753 aa27.37■■□□□ 1.97
CCDC61-205ENST00000596161 COL5A2P05997 1499 aaPredicted RBP27.37■■□□□ 1.97
CCDC61-205ENST00000596161 MAP3K19Q56UN5 1328 aa27.37■■□□□ 1.97
CCDC61-205ENST00000596161 MORC1Q86VD1 984 aa27.36■■□□□ 1.97
CCDC61-205ENST00000596161 GJD4Q96KN9 370 aaPredicted RBP27.36■■□□□ 1.97
CCDC61-205ENST00000596161 NPC1L1Q9UHC9 1359 aa27.35■■□□□ 1.97
CCDC61-205ENST00000596161 AMPHP49418 695 aa27.35■■□□□ 1.97
CCDC61-205ENST00000596161 RTL1A6NKG5 1358 aa27.35■■□□□ 1.97
CCDC61-205ENST00000596161 AXIN2Q9Y2T1 843 aa27.34■■□□□ 1.97
CCDC61-205ENST00000596161 KIF24Q5T7B8 1368 aa27.34■■□□□ 1.97
CCDC61-205ENST00000596161 BLMP54132 1417 aaPredicted RBP27.33■■□□□ 1.97
CCDC61-205ENST00000596161 FBLN1P23142 703 aa27.33■■□□□ 1.97
CCDC61-205ENST00000596161 RRS1Q15050 365 aaKnown RBP27.33■■□□□ 1.97
CCDC61-205ENST00000596161 IP6K1Q92551 441 aa27.33■■□□□ 1.97
CCDC61-205ENST00000596161 CDK12Q9NYV4 1490 aaPredicted RBP27.32■■□□□ 1.96
CCDC61-205ENST00000596161 SPATA31A5Q5VU36 1347 aa27.31■■□□□ 1.96
CCDC61-205ENST00000596161 SPATA31A7Q8IWB4 1347 aa27.31■■□□□ 1.96
CCDC61-205ENST00000596161 ZNF316A6NFI3 1004 aaPredicted RBP27.3■■□□□ 1.96
CCDC61-205ENST00000596161 WDR17Q8IZU2 1322 aa27.3■■□□□ 1.96
CCDC61-205ENST00000596161 GLI3P10071 1580 aa27.3■■□□□ 1.96
CCDC61-205ENST00000596161 CSB-PGBD3P0DP91 1061 aa27.29■■□□□ 1.96
CCDC61-205ENST00000596161 HOXC9P31274 260 aa27.29■■□□□ 1.96
CCDC61-205ENST00000596161 TNNT2P45379 298 aaPredicted RBP27.29■■□□□ 1.96
CCDC61-205ENST00000596161 CC2D1BQ5T0F9 858 aaKnown RBP27.29■■□□□ 1.96
CCDC61-205ENST00000596161 LARP1Q6PKG0 1096 aaKnown RBP27.29■■□□□ 1.96
CCDC61-205ENST00000596161 CRB1P82279 1406 aa27.29■■□□□ 1.96
CCDC61-205ENST00000596161 RGPD5Q99666 1765 aa27.29■■□□□ 1.96
CCDC61-205ENST00000596161 FLT4P35916 1363 aa27.28■■□□□ 1.96
CCDC61-205ENST00000596161 ERBB3P21860 1342 aa27.27■■□□□ 1.96
CCDC61-205ENST00000596161 SPATA31A1Q5TZJ5 1347 aa27.27■■□□□ 1.96
CCDC61-205ENST00000596161 DDX10Q13206 875 aaKnown RBP27.27■■□□□ 1.96
CCDC61-205ENST00000596161 TOM1L2Q6ZVM7 507 aa27.26■■□□□ 1.95
CCDC61-205ENST00000596161 ANKRD24Q8TF21 1146 aa27.26■■□□□ 1.95
CCDC61-205ENST00000596161 EMILIN1Q9Y6C2 1016 aa27.26■■□□□ 1.95
CCDC61-205ENST00000596161 ILDR2Q71H61 639 aa27.25■■□□□ 1.95
CCDC61-205ENST00000596161 POLKQ9UBT6 870 aa27.25■■□□□ 1.95
CCDC61-205ENST00000596161 INSRP06213 1382 aa27.23■■□□□ 1.95
CCDC61-205ENST00000596161 MAP2P11137 1827 aaKnown RBP27.23■■□□□ 1.95
CCDC61-205ENST00000596161 PPM1GO15355 546 aaPredicted RBP27.23■■□□□ 1.95
CCDC61-205ENST00000596161 PEAK1Q9H792 1746 aa27.23■■□□□ 1.95
CCDC61-205ENST00000596161 RGS12O14924 1447 aa27.23■■□□□ 1.95
CCDC61-205ENST00000596161 SMG6Q86US8 1419 aaKnown RBP27.23■■□□□ 1.95
CCDC61-205ENST00000596161 TCP11L2Q8N4U5 519 aa27.22■■□□□ 1.95
CCDC61-205ENST00000596161 USP35Q9P2H5 1018 aa27.22■■□□□ 1.95
CCDC61-205ENST00000596161 THRAP3Q9Y2W1 955 aaKnown RBP27.22■■□□□ 1.95
CCDC61-205ENST00000596161 CNGB1Q14028 1251 aaPredicted RBP27.21■■□□□ 1.95
CCDC61-205ENST00000596161 LTV1Q96GA3 475 aaPredicted RBP27.21■■□□□ 1.95
CCDC61-205ENST00000596161 CARD10Q9BWT7 1032 aa27.21■■□□□ 1.95
CCDC61-205ENST00000596161 FAM208AQ9UK61 1670 aaKnown RBP27.21■■□□□ 1.95
CCDC61-205ENST00000596161 ONECUT3O60422 494 aaPredicted RBP27.2■■□□□ 1.94
CCDC61-205ENST00000596161 FAM98CQ17RN3 349 aaKnown RBP27.2■■□□□ 1.94
CCDC61-205ENST00000596161 HSP90AB2PQ58FF8 381 aa27.19■■□□□ 1.94
CCDC61-205ENST00000596161 BARGINQ6ZT62 677 aa27.19■■□□□ 1.94
CCDC61-205ENST00000596161 NLRP2Q9NX02 1062 aa27.19■■□□□ 1.94
CCDC61-205ENST00000596161 A0A0G2JS52 829 aa27.18■■□□□ 1.94
CCDC61-205ENST00000596161 MYT1Q01538 1121 aa27.18■■□□□ 1.94
CCDC61-205ENST00000596161 SEPT12Q8IYM1 358 aa27.16■■□□□ 1.94
CCDC61-205ENST00000596161 THSD7AQ9UPZ6 1657 aa27.14■■□□□ 1.93
CCDC61-205ENST00000596161 CDCA7Q9BWT1 371 aaPredicted RBP27.13■■□□□ 1.93
CCDC61-205ENST00000596161 MTHFSP49914 203 aa27.11■■□□□ 1.93
CCDC61-205ENST00000596161 WNK3Q9BYP7 1800 aa27.09■■□□□ 1.93
CCDC61-205ENST00000596161 PARD3Q8TEW0 1356 aa27.08■■□□□ 1.93
CCDC61-205ENST00000596161 DISP2A7MBM2 1401 aa27.07■■□□□ 1.92
CCDC61-205ENST00000596161 EIF4A2Q14240 407 aaKnown RBP27.07■■□□□ 1.92
CCDC61-205ENST00000596161 NBPF6Q5VWK0 638 aa27.07■■□□□ 1.92
CCDC61-205ENST00000596161 NBPF4Q96M43 638 aa27.07■■□□□ 1.92
CCDC61-205ENST00000596161 PARP4Q9UKK3 1724 aaKnown RBP27.06■■□□□ 1.92
CCDC61-205ENST00000596161 IL2RBP14784 551 aa27.05■■□□□ 1.92
CCDC61-205ENST00000596161 RALBP1Q15311 655 aa27.05■■□□□ 1.92
CCDC61-205ENST00000596161 KRT27Q7Z3Y8 459 aa27.05■■□□□ 1.92
CCDC61-205ENST00000596161 RGPD2P0DJD1 1756 aa27.04■■□□□ 1.92
CCDC61-205ENST00000596161 BRWD3Q6RI45 1802 aa27.04■■□□□ 1.92
CCDC61-205ENST00000596161 PPP2R1AP30153 589 aa27.04■■□□□ 1.92
CCDC61-205ENST00000596161 PDE3BQ13370 1112 aa27.03■■□□□ 1.92
CCDC61-205ENST00000596161 DDB1Q16531 1140 aa27.03■■□□□ 1.92
CCDC61-205ENST00000596161 CFAP53Q96M91 514 aa27.03■■□□□ 1.92
CCDC61-205ENST00000596161 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
CCDC61-205ENST00000596161 EYA1Q99502 592 aa27.01■■□□□ 1.91
CCDC61-205ENST00000596161 LRRC37A3O60309 1634 aa27.01■■□□□ 1.91
CCDC61-205ENST00000596161 NCAPD2Q15021 1401 aa27■■□□□ 1.91
CCDC61-205ENST00000596161 RAPGEF4Q8WZA2 1011 aa27■■□□□ 1.91
CCDC61-205ENST00000596161 EXOC5O00471 708 aa26.99■■□□□ 1.91
CCDC61-205ENST00000596161 IGSF1Q8N6C5 1336 aa26.98■■□□□ 1.91
CCDC61-205ENST00000596161 DIAPH1O60610 1272 aaKnown RBP26.98■■□□□ 1.91
CCDC61-205ENST00000596161 IL13P35225 146 aa26.98■■□□□ 1.91
CCDC61-205ENST00000596161 TNS2Q63HR2 1409 aa26.98■■□□□ 1.91
CCDC61-205ENST00000596161 TATP17735 454 aaPredicted RBP26.97■■□□□ 1.91
CCDC61-205ENST00000596161 COL3A1P02461 1466 aaPredicted RBP26.95■■□□□ 1.91
CCDC61-205ENST00000596161 SOCS7O14512 581 aa26.95■■□□□ 1.9
CCDC61-205ENST00000596161 MEGF6O75095 1541 aa26.95■■□□□ 1.9
CCDC61-205ENST00000596161 OVOS2A0A0G2JMS6 1433 aa26.94■■□□□ 1.9
CCDC61-205ENST00000596161 MYBBP1AQ9BQG0 1328 aaKnown RBP26.93■■□□□ 1.9
CCDC61-205ENST00000596161 PRKRIP1Q9H875 184 aaPredicted RBP26.93■■□□□ 1.9
CCDC61-205ENST00000596161 RGPD1P0DJD0 1748 aa26.92■■□□□ 1.9
CCDC61-205ENST00000596161 ZCRB1Q8TBF4 217 aaKnown RBP26.91■■□□□ 1.9
CCDC61-205ENST00000596161 PLEKHG2Q9H7P9 1386 aa26.91■■□□□ 1.9
CCDC61-205ENST00000596161 FAM196AQ6ZSG2 479 aa26.9■■□□□ 1.9
CCDC61-205ENST00000596161 NUDCQ9Y266 331 aa26.9■■□□□ 1.9
CCDC61-205ENST00000596161 FAM182BQ5T319 152 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms