RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 LRRC37A3O60309 1634 aa15.17■□□□□ 0.02
NOTCH3-203ENST00000595514 AATKQ6ZMQ8 1374 aa15.17■□□□□ 0.02
NOTCH3-203ENST00000595514 ZBTB7CA1YPR0 619 aa15.17■□□□□ 0.02
NOTCH3-203ENST00000595514 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
NOTCH3-203ENST00000595514 USP19O94966 1318 aa15.17■□□□□ 0.02
NOTCH3-203ENST00000595514 GRIN3BO60391 1043 aa15.16■□□□□ 0.02
NOTCH3-203ENST00000595514 GCP02774 474 aa15.16■□□□□ 0.02
NOTCH3-203ENST00000595514 POLD1P28340 1107 aa15.16■□□□□ 0.02
NOTCH3-203ENST00000595514 NLRP13Q86W25 1043 aa15.15■□□□□ 0.02
NOTCH3-203ENST00000595514 CDCA7Q9BWT1 371 aaPredicted RBP15.15■□□□□ 0.02
NOTCH3-203ENST00000595514 GPBP1L1Q9HC44 474 aaPredicted RBP15.15■□□□□ 0.02
NOTCH3-203ENST00000595514 ATP10DQ9P241 1426 aa15.15■□□□□ 0.02
NOTCH3-203ENST00000595514 ACEP12821 1306 aa15.15■□□□□ 0.02
NOTCH3-203ENST00000595514 POLR3AO14802 1390 aaPredicted RBP15.13■□□□□ 0.01
NOTCH3-203ENST00000595514 ADGRB1O14514 1584 aa15.12■□□□□ 0.01
NOTCH3-203ENST00000595514 NLGN2Q8NFZ4 835 aa15.12■□□□□ 0.01
NOTCH3-203ENST00000595514 MPHOSPH9Q99550 1183 aa15.12■□□□□ 0.01
NOTCH3-203ENST00000595514 ITSN1Q15811 1721 aa15.12■□□□□ 0.01
NOTCH3-203ENST00000595514 SLC16A10Q8TF71 515 aa15.11■□□□□ 0.01
NOTCH3-203ENST00000595514 YBX3P16989 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
NOTCH3-203ENST00000595514 ZNF827Q17R98 1081 aa15.1■□□□□ 0.01
NOTCH3-203ENST00000595514 CCDC61Q9Y6R9 512 aa15.1■□□□□ 0.01
NOTCH3-203ENST00000595514 EXOC5O00471 708 aa15.09■□□□□ 0.01
NOTCH3-203ENST00000595514 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
NOTCH3-203ENST00000595514 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
NOTCH3-203ENST00000595514 WDR17Q8IZU2 1322 aa15.09■□□□□ 0.01
NOTCH3-203ENST00000595514 PLEKHG3A1L390 1219 aa15.08■□□□□ 0
NOTCH3-203ENST00000595514 AKAP12Q02952 1782 aa15.06■□□□□ 0
NOTCH3-203ENST00000595514 CSB-PGBD3P0DP91 1061 aa15.06■□□□□ 0
NOTCH3-203ENST00000595514 ACSBG1Q96GR2 724 aa15.06■□□□□ 0
NOTCH3-203ENST00000595514 PAPPAQ13219 1627 aa15.06■□□□□ 0
NOTCH3-203ENST00000595514 CAPN15O75808 1086 aa15.05■□□□□ -0
NOTCH3-203ENST00000595514 CARD10Q9BWT7 1032 aa15.05■□□□□ -0
NOTCH3-203ENST00000595514 BRD4O60885 1362 aaPredicted RBP15.05■□□□□ -0
NOTCH3-203ENST00000595514 TOPAZ1Q8N9V7 1692 aa15.05■□□□□ -0
NOTCH3-203ENST00000595514 APLP1P51693 650 aa15.04■□□□□ -0
NOTCH3-203ENST00000595514 NLRP6P59044 892 aa15.04■□□□□ -0
NOTCH3-203ENST00000595514 AKT1S1Q96B36 256 aa15.03■□□□□ -0
NOTCH3-203ENST00000595514 LRRC4BQ9NT99 713 aa15.03■□□□□ -0
NOTCH3-203ENST00000595514 AXIN2Q9Y2T1 843 aa15.03■□□□□ -0
NOTCH3-203ENST00000595514 TNS2Q63HR2 1409 aa15.02■□□□□ -0
NOTCH3-203ENST00000595514 ADCY9O60503 1353 aa15.02■□□□□ -0
NOTCH3-203ENST00000595514 USP6P35125 1406 aa15.01□□□□□ -0.01
NOTCH3-203ENST00000595514 WNK3Q9BYP7 1800 aa15.01□□□□□ -0.01
NOTCH3-203ENST00000595514 PNPLA7Q6ZV29 1317 aa15.01□□□□□ -0.01
NOTCH3-203ENST00000595514 NHSQ6T4R5 1651 aa15.01□□□□□ -0.01
NOTCH3-203ENST00000595514 TFCP2L1Q9NZI6 479 aa15.01□□□□□ -0.01
NOTCH3-203ENST00000595514 SLC27A3Q5K4L6 730 aa15□□□□□ -0.01
NOTCH3-203ENST00000595514 KDM2AQ9Y2K7 1162 aa15□□□□□ -0.01
NOTCH3-203ENST00000595514 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
NOTCH3-203ENST00000595514 SLIT3O75094 1523 aa14.99□□□□□ -0.01
NOTCH3-203ENST00000595514 KIF3CO14782 793 aa14.98□□□□□ -0.01
NOTCH3-203ENST00000595514 COL13A1Q5TAT6 717 aaPredicted RBP14.98□□□□□ -0.01
NOTCH3-203ENST00000595514 DNAJC5GQ8N7S2 189 aa14.98□□□□□ -0.01
NOTCH3-203ENST00000595514 CPSF1Q10570 1443 aaKnown RBP14.98□□□□□ -0.01
NOTCH3-203ENST00000595514 PPIP5K1Q6PFW1 1433 aa14.98□□□□□ -0.01
NOTCH3-203ENST00000595514 ARHGEF28Q8N1W1 1705 aaKnown RBP14.97□□□□□ -0.01
NOTCH3-203ENST00000595514 PRELPP51888 382 aa14.97□□□□□ -0.01
NOTCH3-203ENST00000595514 TNS4Q8IZW8 715 aa14.97□□□□□ -0.01
NOTCH3-203ENST00000595514 MSH5O43196 834 aa14.96□□□□□ -0.01
NOTCH3-203ENST00000595514 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.01
NOTCH3-203ENST00000595514 ARHGEF25Q86VW2 580 aa14.96□□□□□ -0.01
NOTCH3-203ENST00000595514 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.01
NOTCH3-203ENST00000595514 COL18A1P39060 1754 aa14.96□□□□□ -0.02
NOTCH3-203ENST00000595514 COL24A1Q17RW2 1714 aa14.95□□□□□ -0.02
NOTCH3-203ENST00000595514 SOX12O15370 315 aa14.95□□□□□ -0.02
NOTCH3-203ENST00000595514 ABCC6O95255 1503 aa14.94□□□□□ -0.02
NOTCH3-203ENST00000595514 KCNH5Q8NCM2 988 aa14.94□□□□□ -0.02
NOTCH3-203ENST00000595514 CD2APQ9Y5K6 639 aa14.94□□□□□ -0.02
NOTCH3-203ENST00000595514 QSER1Q2KHR3 1735 aa14.93□□□□□ -0.02
NOTCH3-203ENST00000595514 STAC3Q96MF2 364 aa14.93□□□□□ -0.02
NOTCH3-203ENST00000595514 BTAF1O14981 1849 aa14.93□□□□□ -0.02
NOTCH3-203ENST00000595514 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
NOTCH3-203ENST00000595514 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
NOTCH3-203ENST00000595514 TOMM70O94826 608 aa14.91□□□□□ -0.02
NOTCH3-203ENST00000595514 IL2RBP14784 551 aa14.91□□□□□ -0.02
NOTCH3-203ENST00000595514 KCNQ4P56696 695 aa14.91□□□□□ -0.02
NOTCH3-203ENST00000595514 CABP2Q9NPB3 220 aa14.91□□□□□ -0.02
NOTCH3-203ENST00000595514 NLRP2Q9NX02 1062 aa14.9□□□□□ -0.02
NOTCH3-203ENST00000595514 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
NOTCH3-203ENST00000595514 COL23A1Q86Y22 540 aaPredicted RBP14.89□□□□□ -0.03
NOTCH3-203ENST00000595514 KLRG1Q96E93 195 aa14.89□□□□□ -0.03
NOTCH3-203ENST00000595514 SYTL4Q96C24 671 aaPredicted RBP14.88□□□□□ -0.03
NOTCH3-203ENST00000595514 RAB3GAP2Q9H2M9 1393 aa14.87□□□□□ -0.03
NOTCH3-203ENST00000595514 JMYQ8N9B5 988 aa14.87□□□□□ -0.03
NOTCH3-203ENST00000595514 WWC3Q9ULE0 1092 aa14.87□□□□□ -0.03
NOTCH3-203ENST00000595514 PIK3C2AO00443 1686 aa14.87□□□□□ -0.03
NOTCH3-203ENST00000595514 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
NOTCH3-203ENST00000595514 DDX54Q8TDD1 881 aaKnown RBP14.86□□□□□ -0.03
NOTCH3-203ENST00000595514 CCNL1Q9UK58 526 aaPredicted RBP14.86□□□□□ -0.03
NOTCH3-203ENST00000595514 ERBB3P21860 1342 aa14.86□□□□□ -0.03
NOTCH3-203ENST00000595514 IGSF1Q8N6C5 1336 aa14.86□□□□□ -0.03
NOTCH3-203ENST00000595514 PCNTO95613 3336 aa14.86□□□□□ -0.03
NOTCH3-203ENST00000595514 SLC34A2O95436 690 aa14.85□□□□□ -0.03
NOTCH3-203ENST00000595514 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
NOTCH3-203ENST00000595514 TTC21BQ7Z4L5 1316 aa14.85□□□□□ -0.03
NOTCH3-203ENST00000595514 RGPD5Q99666 1765 aa14.85□□□□□ -0.03
NOTCH3-203ENST00000595514 TUBGCP6Q96RT7 1819 aa14.85□□□□□ -0.03
NOTCH3-203ENST00000595514 PRIM1P49642 420 aaKnown RBP14.83□□□□□ -0.04
NOTCH3-203ENST00000595514 HTRA3P83110 453 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms