RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SGIP1Q9BQI5 828 aa18.65■□□□□ 0.58
SCAF1-202ENST00000595242 ACEP12821 1306 aa18.65■□□□□ 0.58
SCAF1-202ENST00000595242 POLR3AO14802 1390 aaPredicted RBP18.65■□□□□ 0.58
SCAF1-202ENST00000595242 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
SCAF1-202ENST00000595242 KAT6BQ8WYB5 2073 aa18.64■□□□□ 0.57
SCAF1-202ENST00000595242 GCP02774 474 aa18.63■□□□□ 0.57
SCAF1-202ENST00000595242 TXNRD1Q16881 649 aa18.63■□□□□ 0.57
SCAF1-202ENST00000595242 USP19O94966 1318 aa18.63■□□□□ 0.57
SCAF1-202ENST00000595242 ARXQ96QS3 562 aa18.62■□□□□ 0.57
SCAF1-202ENST00000595242 RGPD5Q99666 1765 aa18.61■□□□□ 0.57
SCAF1-202ENST00000595242 GPR162Q16538 588 aa18.61■□□□□ 0.57
SCAF1-202ENST00000595242 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
SCAF1-202ENST00000595242 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
SCAF1-202ENST00000595242 CDK19Q9BWU1 502 aa18.61■□□□□ 0.57
SCAF1-202ENST00000595242 BCL9O00512 1426 aa18.59■□□□□ 0.57
SCAF1-202ENST00000595242 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
SCAF1-202ENST00000595242 ZBTB7CA1YPR0 619 aa18.59■□□□□ 0.57
SCAF1-202ENST00000595242 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
SCAF1-202ENST00000595242 CCDC61Q9Y6R9 512 aa18.59■□□□□ 0.57
SCAF1-202ENST00000595242 COL18A1P39060 1754 aa18.58■□□□□ 0.57
SCAF1-202ENST00000595242 PLEKHG3A1L390 1219 aa18.58■□□□□ 0.56
SCAF1-202ENST00000595242 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
SCAF1-202ENST00000595242 KDM2AQ9Y2K7 1162 aa18.57■□□□□ 0.56
SCAF1-202ENST00000595242 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
SCAF1-202ENST00000595242 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
SCAF1-202ENST00000595242 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
SCAF1-202ENST00000595242 PAPPAQ13219 1627 aa18.53■□□□□ 0.56
SCAF1-202ENST00000595242 NHSQ6T4R5 1651 aa18.53■□□□□ 0.56
SCAF1-202ENST00000595242 CLSPNQ9HAW4 1339 aa18.52■□□□□ 0.56
SCAF1-202ENST00000595242 WDR17Q8IZU2 1322 aa18.51■□□□□ 0.55
SCAF1-202ENST00000595242 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
SCAF1-202ENST00000595242 COL24A1Q17RW2 1714 aa18.51■□□□□ 0.55
SCAF1-202ENST00000595242 BTAF1O14981 1849 aa18.51■□□□□ 0.55
SCAF1-202ENST00000595242 SLIT3O75094 1523 aa18.5■□□□□ 0.55
SCAF1-202ENST00000595242 KLHL34Q8N239 644 aa18.5■□□□□ 0.55
SCAF1-202ENST00000595242 AXIN2Q9Y2T1 843 aa18.5■□□□□ 0.55
SCAF1-202ENST00000595242 QSER1Q2KHR3 1735 aa18.49■□□□□ 0.55
SCAF1-202ENST00000595242 EXOC5O00471 708 aa18.49■□□□□ 0.55
SCAF1-202ENST00000595242 NLRP6P59044 892 aa18.49■□□□□ 0.55
SCAF1-202ENST00000595242 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
SCAF1-202ENST00000595242 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
SCAF1-202ENST00000595242 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
SCAF1-202ENST00000595242 CARD10Q9BWT7 1032 aa18.46■□□□□ 0.55
SCAF1-202ENST00000595242 PIK3C2AO00443 1686 aa18.46■□□□□ 0.55
SCAF1-202ENST00000595242 TUBGCP6Q96RT7 1819 aa18.45■□□□□ 0.54
SCAF1-202ENST00000595242 ZNF827Q17R98 1081 aa18.45■□□□□ 0.54
SCAF1-202ENST00000595242 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
SCAF1-202ENST00000595242 POLD1P28340 1107 aa18.44■□□□□ 0.54
SCAF1-202ENST00000595242 SRPK2P78362 688 aaKnown RBP18.44■□□□□ 0.54
SCAF1-202ENST00000595242 ACSBG1Q96GR2 724 aa18.44■□□□□ 0.54
SCAF1-202ENST00000595242 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
SCAF1-202ENST00000595242 TRPM1Q7Z4N2 1603 aa18.43■□□□□ 0.54
SCAF1-202ENST00000595242 SLC16A10Q8TF71 515 aa18.43■□□□□ 0.54
SCAF1-202ENST00000595242 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
SCAF1-202ENST00000595242 USP6P35125 1406 aa18.42■□□□□ 0.54
SCAF1-202ENST00000595242 TNS2Q63HR2 1409 aa18.42■□□□□ 0.54
SCAF1-202ENST00000595242 NLGN2Q8NFZ4 835 aa18.42■□□□□ 0.54
SCAF1-202ENST00000595242 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
SCAF1-202ENST00000595242 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
SCAF1-202ENST00000595242 CABP2Q9NPB3 220 aa18.41■□□□□ 0.54
SCAF1-202ENST00000595242 LRRC4BQ9NT99 713 aa18.41■□□□□ 0.54
SCAF1-202ENST00000595242 KIAA1210Q9ULL0 1709 aa18.4■□□□□ 0.54
SCAF1-202ENST00000595242 HSPA6P17066 643 aa18.4■□□□□ 0.54
SCAF1-202ENST00000595242 ARHGEF25Q86VW2 580 aa18.4■□□□□ 0.54
SCAF1-202ENST00000595242 ABCC6O95255 1503 aa18.39■□□□□ 0.54
SCAF1-202ENST00000595242 YBX3P16989 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
SCAF1-202ENST00000595242 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
SCAF1-202ENST00000595242 CCDC7Q96M83 1385 aa18.39■□□□□ 0.53
SCAF1-202ENST00000595242 ATP10DQ9P241 1426 aa18.39■□□□□ 0.53
SCAF1-202ENST00000595242 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
SCAF1-202ENST00000595242 SOX12O15370 315 aa18.37■□□□□ 0.53
SCAF1-202ENST00000595242 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
SCAF1-202ENST00000595242 GPBP1L1Q9HC44 474 aaPredicted RBP18.37■□□□□ 0.53
SCAF1-202ENST00000595242 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
SCAF1-202ENST00000595242 TFCP2L1Q9NZI6 479 aa18.34■□□□□ 0.53
SCAF1-202ENST00000595242 SLC27A3Q5K4L6 730 aa18.33■□□□□ 0.52
SCAF1-202ENST00000595242 LTN1O94822 1766 aa18.32■□□□□ 0.52
SCAF1-202ENST00000595242 LY75O60449 1722 aa18.32■□□□□ 0.52
SCAF1-202ENST00000595242 CENPJQ9HC77 1338 aaPredicted RBP18.31■□□□□ 0.52
SCAF1-202ENST00000595242 IL2RBP14784 551 aa18.31■□□□□ 0.52
SCAF1-202ENST00000595242 ZNF526Q8TF50 670 aaPredicted RBP18.31■□□□□ 0.52
SCAF1-202ENST00000595242 NFAT5O94916 1531 aa18.31■□□□□ 0.52
SCAF1-202ENST00000595242 NBPF1Q3BBV0 1214 aa18.3■□□□□ 0.52
SCAF1-202ENST00000595242 KCNQ4P56696 695 aa18.29■□□□□ 0.52
SCAF1-202ENST00000595242 NLRP2Q9NX02 1062 aa18.29■□□□□ 0.52
SCAF1-202ENST00000595242 TTC21BQ7Z4L5 1316 aa18.28■□□□□ 0.52
SCAF1-202ENST00000595242 ADCY9O60503 1353 aa18.28■□□□□ 0.52
SCAF1-202ENST00000595242 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
SCAF1-202ENST00000595242 ERBB3P21860 1342 aa18.25■□□□□ 0.51
SCAF1-202ENST00000595242 MSH5O43196 834 aa18.25■□□□□ 0.51
SCAF1-202ENST00000595242 TTC21AQ8NDW8 1320 aa18.24■□□□□ 0.51
SCAF1-202ENST00000595242 DOT1LQ8TEK3 1739 aa18.24■□□□□ 0.51
SCAF1-202ENST00000595242 COL23A1Q86Y22 540 aaPredicted RBP18.22■□□□□ 0.51
SCAF1-202ENST00000595242 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
SCAF1-202ENST00000595242 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
SCAF1-202ENST00000595242 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
SCAF1-202ENST00000595242 SYTL4Q96C24 671 aaPredicted RBP18.21■□□□□ 0.51
SCAF1-202ENST00000595242 EVC2Q86UK5 1308 aa18.21■□□□□ 0.51
SCAF1-202ENST00000595242 MON2Q7Z3U7 1717 aa18.2■□□□□ 0.5
SCAF1-202ENST00000595242 APLP1P51693 650 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms