RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PNPLA7Q6ZV29 1317 aa4.99□□□□□ -1.61
VRK3-204ENST00000593912 KCPQ6ZWJ8 1503 aa4.99□□□□□ -1.61
VRK3-204ENST00000593912 CICQ96RK0 1608 aaPredicted RBP4.99□□□□□ -1.61
VRK3-204ENST00000593912 MSL1Q68DK7 614 aa4.99□□□□□ -1.61
VRK3-204ENST00000593912 WAPLQ7Z5K2 1190 aa4.99□□□□□ -1.61
VRK3-204ENST00000593912 MKRN1Q9UHC7 482 aaKnown RBP4.99□□□□□ -1.61
VRK3-204ENST00000593912 PLEKHH1Q9ULM0 1364 aa4.99□□□□□ -1.61
VRK3-204ENST00000593912 A0A0C4DFX4 3053 aa4.99□□□□□ -1.61
VRK3-204ENST00000593912 WNK3Q9BYP7 1800 aa4.98□□□□□ -1.61
VRK3-204ENST00000593912 DLL1O00548 723 aa4.98□□□□□ -1.61
VRK3-204ENST00000593912 CTCFP49711 727 aaPredicted RBP4.98□□□□□ -1.61
VRK3-204ENST00000593912 EVA1CP58658 441 aa4.98□□□□□ -1.61
VRK3-204ENST00000593912 ZC3H6P61129 1189 aaKnown RBP4.98□□□□□ -1.61
VRK3-204ENST00000593912 MARCH10Q8NA82 808 aaPredicted RBP4.98□□□□□ -1.61
VRK3-204ENST00000593912 SLC16A10Q8TF71 515 aa4.98□□□□□ -1.61
VRK3-204ENST00000593912 LRRC4BQ9NT99 713 aa4.98□□□□□ -1.61
VRK3-204ENST00000593912 CHIC2Q9UKJ5 165 aa4.98□□□□□ -1.61
VRK3-204ENST00000593912 IGSF1Q8N6C5 1336 aa4.97□□□□□ -1.61
VRK3-204ENST00000593912 CLTCL1P53675 1640 aa4.97□□□□□ -1.61
VRK3-204ENST00000593912 PKD1L3Q7Z443 1732 aa4.97□□□□□ -1.61
VRK3-204ENST00000593912 NHSQ6T4R5 1651 aa4.97□□□□□ -1.61
VRK3-204ENST00000593912 LMO7Q8WWI1 1683 aa4.97□□□□□ -1.61
VRK3-204ENST00000593912 C11orf95C9JLR9 678 aaPredicted RBP4.97□□□□□ -1.61
VRK3-204ENST00000593912 RRAGCQ9HB90 399 aa4.97□□□□□ -1.61
VRK3-204ENST00000593912 BTAF1O14981 1849 aa4.97□□□□□ -1.61
VRK3-204ENST00000593912 MYOM3Q5VTT5 1437 aa4.97□□□□□ -1.61
VRK3-204ENST00000593912 TNRC6CQ9HCJ0 1690 aaKnown RBP4.96□□□□□ -1.61
VRK3-204ENST00000593912 HSPA8P11142 646 aaKnown RBP4.96□□□□□ -1.62
VRK3-204ENST00000593912 KCNQ4P56696 695 aa4.96□□□□□ -1.62
VRK3-204ENST00000593912 MAPK8IP2Q13387 824 aaPredicted RBP4.96□□□□□ -1.62
VRK3-204ENST00000593912 DDB1Q16531 1140 aa4.96□□□□□ -1.62
VRK3-204ENST00000593912 PRPF38BQ5VTL8 546 aaKnown RBP4.96□□□□□ -1.62
VRK3-204ENST00000593912 SMC1BQ8NDV3 1235 aa4.96□□□□□ -1.62
VRK3-204ENST00000593912 SP7Q8TDD2 431 aaPredicted RBP4.96□□□□□ -1.62
VRK3-204ENST00000593912 AKT1S1Q96B36 256 aa4.96□□□□□ -1.62
VRK3-204ENST00000593912 AIDAQ96BJ3 306 aa4.96□□□□□ -1.62
VRK3-204ENST00000593912 STK26Q9P289 416 aa4.96□□□□□ -1.62
VRK3-204ENST00000593912 VIRMAQ69YN4 1812 aaKnown RBP4.95□□□□□ -1.62
VRK3-204ENST00000593912 ACSBG1Q96GR2 724 aa4.95□□□□□ -1.62
VRK3-204ENST00000593912 PIK3C2AO00443 1686 aa4.95□□□□□ -1.62
VRK3-204ENST00000593912 PXDNLA1KZ92 1463 aa4.94□□□□□ -1.62
VRK3-204ENST00000593912 NUTM2GQ5VZR2 741 aa4.94□□□□□ -1.62
VRK3-204ENST00000593912 TFCP2L1Q9NZI6 479 aa4.94□□□□□ -1.62
VRK3-204ENST00000593912 THRAP3Q9Y2W1 955 aaKnown RBP4.94□□□□□ -1.62
VRK3-204ENST00000593912 CD2APQ9Y5K6 639 aa4.94□□□□□ -1.62
VRK3-204ENST00000593912 DAPK1P53355 1430 aa4.94□□□□□ -1.62
VRK3-204ENST00000593912 C10orf71Q711Q0 1435 aa4.94□□□□□ -1.62
VRK3-204ENST00000593912 COL5A2P05997 1499 aaPredicted RBP4.94□□□□□ -1.62
VRK3-204ENST00000593912 N4BP2Q86UW6 1770 aaPredicted RBP4.93□□□□□ -1.62
VRK3-204ENST00000593912 KAT6BQ8WYB5 2073 aa4.93□□□□□ -1.62
VRK3-204ENST00000593912 BCL9O00512 1426 aa4.93□□□□□ -1.62
VRK3-204ENST00000593912 PAK3O75914 559 aaPredicted RBP4.93□□□□□ -1.62
VRK3-204ENST00000593912 KNDC1Q76NI1 1749 aa4.93□□□□□ -1.62
VRK3-204ENST00000593912 HIRIP3Q9BW71 556 aaPredicted RBP4.93□□□□□ -1.62
VRK3-204ENST00000593912 WBP1LQ9NX94 342 aa4.93□□□□□ -1.62
VRK3-204ENST00000593912 CUL9Q8IWT3 2517 aa4.93□□□□□ -1.62
VRK3-204ENST00000593912 CNTNAP1P78357 1384 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 ANKRD30AQ9BXX3 1397 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 KIAA1551Q9HCM1 1747 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 SZT2Q5T011 3432 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 CRB1P82279 1406 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 SOX10P56693 466 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 C9orf131Q5VYM1 1079 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 ARHGAP27Q6ZUM4 889 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 COL23A1Q86Y22 540 aaPredicted RBP4.92□□□□□ -1.62
VRK3-204ENST00000593912 MPNDQ8N594 471 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 QRICH2Q9H0J4 1663 aa4.92□□□□□ -1.62
VRK3-204ENST00000593912 ACIN1Q9UKV3 1341 aaKnown RBP4.92□□□□□ -1.62
VRK3-204ENST00000593912 BRD4O60885 1362 aaPredicted RBP4.91□□□□□ -1.62
VRK3-204ENST00000593912 TRPM1Q7Z4N2 1603 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 KIF1BO60333 1816 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 COL6A3P12111 3177 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 VEGFBP49765 207 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 HABP4Q5JVS0 413 aaKnown RBP4.91□□□□□ -1.62
VRK3-204ENST00000593912 SMIM5Q71RC9 77 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 MCOLN1Q9GZU1 580 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 KDM2BQ8NHM5 1336 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 PITPNM2Q9BZ72 1349 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 GPRASP1Q5JY77 1395 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 PLEKHG2Q9H7P9 1386 aa4.91□□□□□ -1.62
VRK3-204ENST00000593912 USP6P35125 1406 aa4.9□□□□□ -1.62
VRK3-204ENST00000593912 ANKRD50Q9ULJ7 1429 aa4.9□□□□□ -1.62
VRK3-204ENST00000593912 ZBTB7CA1YPR0 619 aa4.9□□□□□ -1.63
VRK3-204ENST00000593912 SAFB2Q14151 953 aaKnown RBP eCLIP4.9□□□□□ -1.63
VRK3-204ENST00000593912 CREBZFQ9NS37 354 aa4.9□□□□□ -1.63
VRK3-204ENST00000593912 TSKSQ9UJT2 592 aa4.9□□□□□ -1.63
VRK3-204ENST00000593912 BCS1LQ9Y276 419 aa4.9□□□□□ -1.63
VRK3-204ENST00000593912 PPLO60437 1756 aa4.9□□□□□ -1.63
VRK3-204ENST00000593912 CASP8AP2Q9UKL3 1982 aa4.89□□□□□ -1.63
VRK3-204ENST00000593912 TMEM132EQ6IEE7 984 aa4.89□□□□□ -1.63
VRK3-204ENST00000593912 RNF181Q9P0P0 153 aa4.89□□□□□ -1.63
VRK3-204ENST00000593912 SBF1O95248 1867 aa4.89□□□□□ -1.63
VRK3-204ENST00000593912 USP54Q70EL1 1684 aa4.89□□□□□ -1.63
VRK3-204ENST00000593912 COL18A1P39060 1754 aa4.88□□□□□ -1.63
VRK3-204ENST00000593912 BRCA1P38398 1863 aaKnown RBP4.88□□□□□ -1.63
VRK3-204ENST00000593912 FXR1P51114 621 aaKnown RBP eCLIP4.88□□□□□ -1.63
VRK3-204ENST00000593912 TOM1L2Q6ZVM7 507 aa4.88□□□□□ -1.63
VRK3-204ENST00000593912 SLC17A8Q8NDX2 589 aa4.88□□□□□ -1.63
VRK3-204ENST00000593912 PRR36Q9H6K5 1346 aa4.88□□□□□ -1.63
VRK3-204ENST00000593912 LY75O60449 1722 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms