RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 ZRANB1Q9UGI0 708 aa27.86■■■□□ 2.05
COPE-204ENST00000593827 ABCC6O95255 1503 aa27.86■■■□□ 2.05
COPE-204ENST00000593827 BLMP54132 1417 aaPredicted RBP27.85■■■□□ 2.05
COPE-204ENST00000593827 CSB-PGBD3P0DP91 1061 aa27.85■■■□□ 2.05
COPE-204ENST00000593827 NFAT5O94916 1531 aa27.85■■■□□ 2.05
COPE-204ENST00000593827 WDR17Q8IZU2 1322 aa27.85■■■□□ 2.05
COPE-204ENST00000593827 PDE3BQ13370 1112 aa27.83■■■□□ 2.05
COPE-204ENST00000593827 AXIN2Q9Y2T1 843 aa27.83■■■□□ 2.05
COPE-204ENST00000593827 OVOS2A0A0J9YW53 1432 aa27.83■■■□□ 2.05
COPE-204ENST00000593827 OVOS2Q6IE36 1432 aa27.83■■■□□ 2.05
COPE-204ENST00000593827 USP54Q70EL1 1684 aa27.82■■■□□ 2.04
COPE-204ENST00000593827 HSPA5P11021 654 aaKnown RBP27.82■■■□□ 2.04
COPE-204ENST00000593827 EP400Q96L91 3159 aa27.81■■■□□ 2.04
COPE-204ENST00000593827 CDCA7Q9BWT1 371 aaPredicted RBP27.81■■■□□ 2.04
COPE-204ENST00000593827 THSD7AQ9UPZ6 1657 aa27.81■■■□□ 2.04
COPE-204ENST00000593827 C11orf95C9JLR9 678 aaPredicted RBP27.8■■■□□ 2.04
COPE-204ENST00000593827 FAM196AQ6ZSG2 479 aa27.78■■■□□ 2.04
COPE-204ENST00000593827 CARD10Q9BWT7 1032 aa27.78■■■□□ 2.04
COPE-204ENST00000593827 BRWD3Q6RI45 1802 aa27.78■■■□□ 2.04
COPE-204ENST00000593827 POLR3GLQ9BT43 218 aa27.76■■■□□ 2.03
COPE-204ENST00000593827 CCDC7Q96M83 1385 aa27.75■■■□□ 2.03
COPE-204ENST00000593827 FYB1O15117 783 aa27.75■■■□□ 2.03
COPE-204ENST00000593827 COL18A1P39060 1754 aa27.75■■■□□ 2.03
COPE-204ENST00000593827 BAG6P46379 1132 aa27.73■■■□□ 2.03
COPE-204ENST00000593827 ERBB3P21860 1342 aa27.72■■■□□ 2.03
COPE-204ENST00000593827 AMPHP49418 695 aa27.72■■■□□ 2.03
COPE-204ENST00000593827 DDB1Q16531 1140 aa27.72■■■□□ 2.03
COPE-204ENST00000593827 IP6K1Q92551 441 aa27.72■■■□□ 2.03
COPE-204ENST00000593827 GGNBP2Q9H3C7 697 aa27.72■■■□□ 2.03
COPE-204ENST00000593827 CGNL1Q0VF96 1302 aa27.7■■■□□ 2.03
COPE-204ENST00000593827 ANKRD24Q8TF21 1146 aa27.7■■■□□ 2.02
COPE-204ENST00000593827 NLRP2Q9NX02 1062 aa27.7■■■□□ 2.02
COPE-204ENST00000593827 NSD3Q9BZ95 1437 aa27.69■■■□□ 2.02
COPE-204ENST00000593827 FAM182BQ5T319 152 aa27.68■■■□□ 2.02
COPE-204ENST00000593827 MAP3K19Q56UN5 1328 aa27.67■■■□□ 2.02
COPE-204ENST00000593827 CARD14Q9BXL6 1004 aa27.67■■■□□ 2.02
COPE-204ENST00000593827 RTL1A6NKG5 1358 aa27.67■■■□□ 2.02
COPE-204ENST00000593827 SRCAPQ6ZRS2 3230 aa27.66■■■□□ 2.02
COPE-204ENST00000593827 EXOC5O00471 708 aa27.64■■■□□ 2.02
COPE-204ENST00000593827 HOXC9P31274 260 aa27.63■■■□□ 2.01
COPE-204ENST00000593827 DEFB132Q7Z7B7 95 aa27.63■■■□□ 2.01
COPE-204ENST00000593827 PARP4Q9UKK3 1724 aaKnown RBP27.63■■■□□ 2.01
COPE-204ENST00000593827 MYOM1P52179 1685 aa27.62■■■□□ 2.01
COPE-204ENST00000593827 OVOS2A0A0G2JMS6 1433 aa27.62■■■□□ 2.01
COPE-204ENST00000593827 KIF24Q5T7B8 1368 aa27.61■■■□□ 2.01
COPE-204ENST00000593827 LTN1O94822 1766 aa27.61■■■□□ 2.01
COPE-204ENST00000593827 TRIM37O94972 964 aa27.61■■■□□ 2.01
COPE-204ENST00000593827 IL2RBP14784 551 aa27.61■■■□□ 2.01
COPE-204ENST00000593827 LTV1Q96GA3 475 aaPredicted RBP27.6■■■□□ 2.01
COPE-204ENST00000593827 DISP2A7MBM2 1401 aa27.59■■■□□ 2.01
COPE-204ENST00000593827 SMG6Q86US8 1419 aaKnown RBP27.59■■■□□ 2.01
COPE-204ENST00000593827 RRS1Q15050 365 aaKnown RBP27.59■■■□□ 2.01
COPE-204ENST00000593827 PANK3Q9H999 370 aa27.58■■■□□ 2.01
COPE-204ENST00000593827 RGPD1P0DJD0 1748 aa27.58■■■□□ 2.01
COPE-204ENST00000593827 RGPD5Q99666 1765 aa27.57■■■□□ 2
COPE-204ENST00000593827 APBA3O96018 575 aa27.56■■■□□ 2
COPE-204ENST00000593827 FLT4P35916 1363 aa27.56■■■□□ 2
COPE-204ENST00000593827 KIF20BQ96Q89 1820 aa27.55■■■□□ 2
COPE-204ENST00000593827 FBLN1P23142 703 aa27.55■■■□□ 2
COPE-204ENST00000593827 PARD3Q8TEW0 1356 aa27.55■■■□□ 2
COPE-204ENST00000593827 LRRC37A3O60309 1634 aa27.54■■■□□ 2
COPE-204ENST00000593827 NSD2O96028 1365 aa27.54■■■□□ 2
COPE-204ENST00000593827 TNS2Q63HR2 1409 aa27.54■■■□□ 2
COPE-204ENST00000593827 BCL9O00512 1426 aa27.53■■■□□ 2
COPE-204ENST00000593827 EN1Q05925 392 aaPredicted RBP27.53■■■□□ 2
COPE-204ENST00000593827 INSRP06213 1382 aa27.52■■■□□ 2
COPE-204ENST00000593827 MARCH10Q8NA82 808 aaPredicted RBP27.52■■■□□ 2
COPE-204ENST00000593827 KNSTRNQ9Y448 316 aa27.52■■■□□ 2
COPE-204ENST00000593827 FAM208AQ9UK61 1670 aaKnown RBP27.51■■□□□ 1.99
COPE-204ENST00000593827 KIF7Q2M1P5 1343 aa27.49■■□□□ 1.99
COPE-204ENST00000593827 WNK3Q9BYP7 1800 aa27.49■■□□□ 1.99
COPE-204ENST00000593827 BCL11BQ9C0K0 894 aaPredicted RBP27.49■■□□□ 1.99
COPE-204ENST00000593827 PPM1GO15355 546 aaPredicted RBP27.48■■□□□ 1.99
COPE-204ENST00000593827 HSP90AB2PQ58FF8 381 aa27.47■■□□□ 1.99
COPE-204ENST00000593827 CAMKK2Q96RR4 588 aa27.47■■□□□ 1.99
COPE-204ENST00000593827 EMILIN1Q9Y6C2 1016 aa27.46■■□□□ 1.99
COPE-204ENST00000593827 EZH2Q15910 746 aaKnown RBP27.45■■□□□ 1.98
COPE-204ENST00000593827 RAPGEF4Q8WZA2 1011 aa27.45■■□□□ 1.98
COPE-204ENST00000593827 TNS1Q9HBL0 1735 aaKnown RBP27.44■■□□□ 1.98
COPE-204ENST00000593827 WASHC2AQ641Q2 1341 aa27.43■■□□□ 1.98
COPE-204ENST00000593827 NBPF6Q5VWK0 638 aa27.43■■□□□ 1.98
COPE-204ENST00000593827 NBPF4Q96M43 638 aa27.43■■□□□ 1.98
COPE-204ENST00000593827 PEAK1Q9H792 1746 aa27.42■■□□□ 1.98
COPE-204ENST00000593827 PLSCR1O15162 318 aa27.42■■□□□ 1.98
COPE-204ENST00000593827 MORC1Q86VD1 984 aa27.42■■□□□ 1.98
COPE-204ENST00000593827 TNNT2P45379 298 aaPredicted RBP27.41■■□□□ 1.98
COPE-204ENST00000593827 POLKQ9UBT6 870 aa27.41■■□□□ 1.98
COPE-204ENST00000593827 TATP17735 454 aaPredicted RBP27.4■■□□□ 1.98
COPE-204ENST00000593827 NBPF14Q5TI25 921 aa27.4■■□□□ 1.98
COPE-204ENST00000593827 ZCRB1Q8TBF4 217 aaKnown RBP27.4■■□□□ 1.98
COPE-204ENST00000593827 DDX54Q8TDD1 881 aaKnown RBP27.39■■□□□ 1.98
COPE-204ENST00000593827 USHBP1Q8N6Y0 703 aa27.35■■□□□ 1.97
COPE-204ENST00000593827 ANKRD26Q9UPS8 1709 aa27.33■■□□□ 1.97
COPE-204ENST00000593827 AMER1Q5JTC6 1135 aaPredicted RBP27.32■■□□□ 1.96
COPE-204ENST00000593827 ACSBG1Q96GR2 724 aa27.32■■□□□ 1.96
COPE-204ENST00000593827 MEGF6O75095 1541 aa27.31■■□□□ 1.96
COPE-204ENST00000593827 PCDH11XQ9BZA7 1347 aa27.3■■□□□ 1.96
COPE-204ENST00000593827 PCDH11YQ9BZA8 1340 aa27.3■■□□□ 1.96
COPE-204ENST00000593827 PSDA5PKW4 1024 aaPredicted RBP27.29■■□□□ 1.96
COPE-204ENST00000593827 KCNQ2O43526 872 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms