RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 C11orf95C9JLR9 678 aaPredicted RBP21.1■□□□□ 0.97
PNKP-202ENST00000593706 NBPF14Q5TI25 921 aa21.1■□□□□ 0.97
PNKP-202ENST00000593706 USP54Q70EL1 1684 aa21.09■□□□□ 0.97
PNKP-202ENST00000593706 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
PNKP-202ENST00000593706 KAT6BQ8WYB5 2073 aa21.09■□□□□ 0.97
PNKP-202ENST00000593706 NEUROD1Q13562 356 aa21.08■□□□□ 0.97
PNKP-202ENST00000593706 DDB1Q16531 1140 aa21.08■□□□□ 0.97
PNKP-202ENST00000593706 NFAT5O94916 1531 aa21.08■□□□□ 0.96
PNKP-202ENST00000593706 WDR17Q8IZU2 1322 aa21.07■□□□□ 0.96
PNKP-202ENST00000593706 SOX12O15370 315 aa21.07■□□□□ 0.96
PNKP-202ENST00000593706 TTC21BQ7Z4L5 1316 aa21.06■□□□□ 0.96
PNKP-202ENST00000593706 ABCC6O95255 1503 aa21.06■□□□□ 0.96
PNKP-202ENST00000593706 ZNF692Q9BU19 519 aaPredicted RBP21.06■□□□□ 0.96
PNKP-202ENST00000593706 KCNH5Q8NCM2 988 aa21.05■□□□□ 0.96
PNKP-202ENST00000593706 KTN1Q86UP2 1357 aaKnown RBP21.05■□□□□ 0.96
PNKP-202ENST00000593706 CASZ1Q86V15 1759 aa21.05■□□□□ 0.96
PNKP-202ENST00000593706 TTC21AQ8NDW8 1320 aa21.04■□□□□ 0.96
PNKP-202ENST00000593706 CSB-PGBD3P0DP91 1061 aa21.03■□□□□ 0.96
PNKP-202ENST00000593706 AXIN2Q9Y2T1 843 aa21.03■□□□□ 0.96
PNKP-202ENST00000593706 ARHGEF25Q86VW2 580 aa21.02■□□□□ 0.96
PNKP-202ENST00000593706 CDCA7Q9BWT1 371 aaPredicted RBP21.02■□□□□ 0.96
PNKP-202ENST00000593706 NHSQ6T4R5 1651 aa21.02■□□□□ 0.95
PNKP-202ENST00000593706 TRIM26Q12899 539 aaPredicted RBP21.01■□□□□ 0.95
PNKP-202ENST00000593706 PPP1R1BQ9UD71 204 aaPredicted RBP21■□□□□ 0.95
PNKP-202ENST00000593706 SBNO2Q9Y2G9 1366 aa20.99■□□□□ 0.95
PNKP-202ENST00000593706 TNS2Q63HR2 1409 aa20.98■□□□□ 0.95
PNKP-202ENST00000593706 CARD10Q9BWT7 1032 aa20.98■□□□□ 0.95
PNKP-202ENST00000593706 BCL11BQ9C0K0 894 aaPredicted RBP20.98■□□□□ 0.95
PNKP-202ENST00000593706 SPON1Q9HCB6 807 aa20.98■□□□□ 0.95
PNKP-202ENST00000593706 FAM208AQ9UK61 1670 aaKnown RBP20.98■□□□□ 0.95
PNKP-202ENST00000593706 BTAF1O14981 1849 aa20.97■□□□□ 0.95
PNKP-202ENST00000593706 PLSCR1O15162 318 aa20.97■□□□□ 0.95
PNKP-202ENST00000593706 CCDC7Q96M83 1385 aa20.97■□□□□ 0.95
PNKP-202ENST00000593706 BCL9O00512 1426 aa20.96■□□□□ 0.95
PNKP-202ENST00000593706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.96■□□□□ 0.95
PNKP-202ENST00000593706 MARCH10Q8NA82 808 aaPredicted RBP20.96■□□□□ 0.95
PNKP-202ENST00000593706 MYOM1P52179 1685 aa20.96■□□□□ 0.95
PNKP-202ENST00000593706 CD163L1Q9NR16 1453 aa20.94■□□□□ 0.94
PNKP-202ENST00000593706 KCNQ2O43526 872 aa20.94■□□□□ 0.94
PNKP-202ENST00000593706 PTF1AQ7RTS3 328 aa20.94■□□□□ 0.94
PNKP-202ENST00000593706 CARD11Q9BXL7 1154 aa20.94■□□□□ 0.94
PNKP-202ENST00000593706 ANO8Q9HCE9 1232 aaPredicted RBP20.93■□□□□ 0.94
PNKP-202ENST00000593706 NINLQ9Y2I6 1382 aa20.93■□□□□ 0.94
PNKP-202ENST00000593706 EXOC5O00471 708 aa20.92■□□□□ 0.94
PNKP-202ENST00000593706 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
PNKP-202ENST00000593706 USP31Q70CQ4 1352 aa20.92■□□□□ 0.94
PNKP-202ENST00000593706 UTRNP46939 3433 aa20.92■□□□□ 0.94
PNKP-202ENST00000593706 HDGFL2Q7Z4V5 671 aaPredicted RBP20.91■□□□□ 0.94
PNKP-202ENST00000593706 EDC4Q6P2E9 1401 aaKnown RBP20.9■□□□□ 0.94
PNKP-202ENST00000593706 TONSLQ96HA7 1378 aa20.9■□□□□ 0.94
PNKP-202ENST00000593706 ERBB3P21860 1342 aa20.9■□□□□ 0.94
PNKP-202ENST00000593706 NME9Q86XW9 330 aa20.9■□□□□ 0.94
PNKP-202ENST00000593706 RGPD2P0DJD1 1756 aa20.9■□□□□ 0.94
PNKP-202ENST00000593706 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.93
PNKP-202ENST00000593706 NLRP2Q9NX02 1062 aa20.88■□□□□ 0.93
PNKP-202ENST00000593706 PAPPAQ13219 1627 aa20.87■□□□□ 0.93
PNKP-202ENST00000593706 TXNRD1Q16881 649 aa20.87■□□□□ 0.93
PNKP-202ENST00000593706 A0A1W2PP64 1363 aa20.86■□□□□ 0.93
PNKP-202ENST00000593706 STK32BQ9NY57 414 aa20.86■□□□□ 0.93
PNKP-202ENST00000593706 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
PNKP-202ENST00000593706 DOT1LQ8TEK3 1739 aa20.86■□□□□ 0.93
PNKP-202ENST00000593706 YY1P25490 414 aa20.85■□□□□ 0.93
PNKP-202ENST00000593706 PROM2Q8N271 834 aa20.85■□□□□ 0.93
PNKP-202ENST00000593706 CHD4Q14839 1912 aa20.84■□□□□ 0.93
PNKP-202ENST00000593706 ZBTB7AO95365 584 aa20.84■□□□□ 0.93
PNKP-202ENST00000593706 IL2RBP14784 551 aa20.84■□□□□ 0.93
PNKP-202ENST00000593706 ANKRD24Q8TF21 1146 aa20.84■□□□□ 0.93
PNKP-202ENST00000593706 PDGFDQ9GZP0 370 aaPredicted RBP20.84■□□□□ 0.93
PNKP-202ENST00000593706 SLC12A5Q9H2X9 1139 aa20.84■□□□□ 0.93
PNKP-202ENST00000593706 QSER1Q2KHR3 1735 aa20.84■□□□□ 0.93
PNKP-202ENST00000593706 ACSBG1Q96GR2 724 aa20.83■□□□□ 0.93
PNKP-202ENST00000593706 SHANK3Q9BYB0 1731 aa20.83■□□□□ 0.92
PNKP-202ENST00000593706 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.92
PNKP-202ENST00000593706 TUBGCP6Q96RT7 1819 aa20.83■□□□□ 0.92
PNKP-202ENST00000593706 SLC15A2Q16348 729 aa20.81■□□□□ 0.92
PNKP-202ENST00000593706 ATF5Q9Y2D1 282 aaPredicted RBP20.79■□□□□ 0.92
PNKP-202ENST00000593706 LY75O60449 1722 aa20.78■□□□□ 0.92
PNKP-202ENST00000593706 GOLGB1Q14789 3259 aaKnown RBP20.77■□□□□ 0.92
PNKP-202ENST00000593706 LTV1Q96GA3 475 aaPredicted RBP20.76■□□□□ 0.91
PNKP-202ENST00000593706 PUS7Q96PZ0 661 aaKnown RBP20.76■□□□□ 0.91
PNKP-202ENST00000593706 PTGER2P43116 358 aa20.75■□□□□ 0.91
PNKP-202ENST00000593706 MTFR1LQ9H019 292 aa20.75■□□□□ 0.91
PNKP-202ENST00000593706 IP6K1Q92551 441 aa20.74■□□□□ 0.91
PNKP-202ENST00000593706 COG3Q96JB2 828 aa20.74■□□□□ 0.91
PNKP-202ENST00000593706 ST20-MTHFSA0A0A6YYL1 179 aa20.72■□□□□ 0.91
PNKP-202ENST00000593706 DDX54Q8TDD1 881 aaKnown RBP20.72■□□□□ 0.91
PNKP-202ENST00000593706 COL24A1Q17RW2 1714 aa20.71■□□□□ 0.91
PNKP-202ENST00000593706 TESK2Q96S53 571 aa20.71■□□□□ 0.91
PNKP-202ENST00000593706 AMPHP49418 695 aa20.7■□□□□ 0.9
PNKP-202ENST00000593706 FHDC1Q9C0D6 1143 aaPredicted RBP20.7■□□□□ 0.9
PNKP-202ENST00000593706 MAP3K19Q56UN5 1328 aa20.7■□□□□ 0.9
PNKP-202ENST00000593706 ANKRD36BQ8N2N9 1353 aa20.7■□□□□ 0.9
PNKP-202ENST00000593706 SLC24A1O60721 1099 aa20.69■□□□□ 0.9
PNKP-202ENST00000593706 HOXC9P31274 260 aa20.69■□□□□ 0.9
PNKP-202ENST00000593706 RTL1A6NKG5 1358 aa20.69■□□□□ 0.9
PNKP-202ENST00000593706 ZNF827Q17R98 1081 aa20.68■□□□□ 0.9
PNKP-202ENST00000593706 SYTL4Q96C24 671 aaPredicted RBP20.68■□□□□ 0.9
PNKP-202ENST00000593706 MEGF6O75095 1541 aa20.68■□□□□ 0.9
PNKP-202ENST00000593706 C5P01031 1676 aa20.67■□□□□ 0.9
PNKP-202ENST00000593706 SYT17Q9BSW7 474 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms