RNA–Protein interactions for RNA: ENST00000593361.5

DDX49-202, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-202ENST00000593361 RALBP1Q15311 655 aa17.53■□□□□ 0.4
DDX49-202ENST00000593361 FLT4P35916 1363 aa17.53■□□□□ 0.4
DDX49-202ENST00000593361 KIF24Q5T7B8 1368 aa17.53■□□□□ 0.4
DDX49-202ENST00000593361 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.4
DDX49-202ENST00000593361 PPM1GO15355 546 aaPredicted RBP17.52■□□□□ 0.4
DDX49-202ENST00000593361 AMPHP49418 695 aa17.52■□□□□ 0.4
DDX49-202ENST00000593361 NGLY1Q96IV0 654 aa17.52■□□□□ 0.4
DDX49-202ENST00000593361 PRKRIP1Q9H875 184 aaPredicted RBP17.52■□□□□ 0.4
DDX49-202ENST00000593361 POLKQ9UBT6 870 aa17.52■□□□□ 0.4
DDX49-202ENST00000593361 BLMP54132 1417 aaPredicted RBP17.51■□□□□ 0.39
DDX49-202ENST00000593361 COL5A2P05997 1499 aaPredicted RBP17.5■□□□□ 0.39
DDX49-202ENST00000593361 ANP32CO43423 234 aa17.5■□□□□ 0.39
DDX49-202ENST00000593361 PPP2R1AP30153 589 aa17.5■□□□□ 0.39
DDX49-202ENST00000593361 HOXC9P31274 260 aa17.5■□□□□ 0.39
DDX49-202ENST00000593361 IP6K1Q92551 441 aa17.5■□□□□ 0.39
DDX49-202ENST00000593361 BTG4Q9NY30 223 aa17.5■□□□□ 0.39
DDX49-202ENST00000593361 AFF2P51816 1311 aa17.49■□□□□ 0.39
DDX49-202ENST00000593361 MIER1Q8N108 512 aa17.49■□□□□ 0.39
DDX49-202ENST00000593361 AXIN2Q9Y2T1 843 aa17.49■□□□□ 0.39
DDX49-202ENST00000593361 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
DDX49-202ENST00000593361 MYBBP1AQ9BQG0 1328 aaKnown RBP17.48■□□□□ 0.39
DDX49-202ENST00000593361 MTHFSP49914 203 aa17.48■□□□□ 0.39
DDX49-202ENST00000593361 FNBP4Q8N3X1 1017 aaPredicted RBP17.48■□□□□ 0.39
DDX49-202ENST00000593361 BCL9LQ86UU0 1499 aa17.48■□□□□ 0.39
DDX49-202ENST00000593361 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
DDX49-202ENST00000593361 INSRP06213 1382 aa17.47■□□□□ 0.39
DDX49-202ENST00000593361 ERBB3P21860 1342 aa17.47■□□□□ 0.39
DDX49-202ENST00000593361 COL3A1P02461 1466 aaPredicted RBP17.46■□□□□ 0.39
DDX49-202ENST00000593361 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
DDX49-202ENST00000593361 UNC5CLQ8IV45 518 aa17.45■□□□□ 0.38
DDX49-202ENST00000593361 ANKRD24Q8TF21 1146 aa17.45■□□□□ 0.38
DDX49-202ENST00000593361 STRN4Q9NRL3 753 aa17.45■□□□□ 0.38
DDX49-202ENST00000593361 USP21Q9UK80 565 aa17.45■□□□□ 0.38
DDX49-202ENST00000593361 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
DDX49-202ENST00000593361 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
DDX49-202ENST00000593361 EVA1CP58658 441 aa17.43■□□□□ 0.38
DDX49-202ENST00000593361 WDR17Q8IZU2 1322 aa17.43■□□□□ 0.38
DDX49-202ENST00000593361 CSB-PGBD3P0DP91 1061 aa17.42■□□□□ 0.38
DDX49-202ENST00000593361 CFAP53Q96M91 514 aa17.42■□□□□ 0.38
DDX49-202ENST00000593361 ATRNO75882 1429 aa17.41■□□□□ 0.38
DDX49-202ENST00000593361 CRB1P82279 1406 aa17.41■□□□□ 0.38
DDX49-202ENST00000593361 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
DDX49-202ENST00000593361 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
DDX49-202ENST00000593361 RGPD1P0DJD0 1748 aa17.41■□□□□ 0.38
DDX49-202ENST00000593361 ZNF772Q68DY9 489 aaPredicted RBP17.4■□□□□ 0.38
DDX49-202ENST00000593361 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
DDX49-202ENST00000593361 VPS72Q15906 364 aa17.39■□□□□ 0.37
DDX49-202ENST00000593361 TOM1L2Q6ZVM7 507 aa17.39■□□□□ 0.37
DDX49-202ENST00000593361 TRPC5Q9UL62 973 aaPredicted RBP17.39■□□□□ 0.37
DDX49-202ENST00000593361 GLI3P10071 1580 aa17.38■□□□□ 0.37
DDX49-202ENST00000593361 DIAPH1O60610 1272 aaKnown RBP17.38■□□□□ 0.37
DDX49-202ENST00000593361 NLRP2Q9NX02 1062 aa17.38■□□□□ 0.37
DDX49-202ENST00000593361 RGS17Q9UGC6 210 aaPredicted RBP17.38■□□□□ 0.37
DDX49-202ENST00000593361 CCDC9Q9Y3X0 531 aaKnown RBP17.38■□□□□ 0.37
DDX49-202ENST00000593361 IL13P35225 146 aa17.37■□□□□ 0.37
DDX49-202ENST00000593361 SPATA31A5Q5VU36 1347 aa17.37■□□□□ 0.37
DDX49-202ENST00000593361 SPATA31A7Q8IWB4 1347 aa17.37■□□□□ 0.37
DDX49-202ENST00000593361 QTRT2Q9H974 415 aaKnown RBP17.36■□□□□ 0.37
DDX49-202ENST00000593361 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
DDX49-202ENST00000593361 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
DDX49-202ENST00000593361 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
DDX49-202ENST00000593361 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
DDX49-202ENST00000593361 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
DDX49-202ENST00000593361 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
DDX49-202ENST00000593361 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
DDX49-202ENST00000593361 USHBP1Q8N6Y0 703 aa17.34■□□□□ 0.37
DDX49-202ENST00000593361 EYA1Q99502 592 aa17.34■□□□□ 0.37
DDX49-202ENST00000593361 PARP4Q9UKK3 1724 aaKnown RBP17.33■□□□□ 0.37
DDX49-202ENST00000593361 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
DDX49-202ENST00000593361 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
DDX49-202ENST00000593361 CCDC184Q52MB2 194 aa17.32■□□□□ 0.36
DDX49-202ENST00000593361 POTEAQ6S8J7 498 aa17.32■□□□□ 0.36
DDX49-202ENST00000593361 TCP11L2Q8N4U5 519 aa17.32■□□□□ 0.36
DDX49-202ENST00000593361 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
DDX49-202ENST00000593361 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
DDX49-202ENST00000593361 THSD7AQ9UPZ6 1657 aa17.32■□□□□ 0.36
DDX49-202ENST00000593361 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
DDX49-202ENST00000593361 MEGF6O75095 1541 aa17.31■□□□□ 0.36
DDX49-202ENST00000593361 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
DDX49-202ENST00000593361 KDRP35968 1356 aa17.3■□□□□ 0.36
DDX49-202ENST00000593361 CCER2I3L3R5 266 aa17.3■□□□□ 0.36
DDX49-202ENST00000593361 RBM6P78332 1123 aaKnown RBP17.3■□□□□ 0.36
DDX49-202ENST00000593361 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
DDX49-202ENST00000593361 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
DDX49-202ENST00000593361 SULT6B1Q6IMI4 303 aa17.29■□□□□ 0.36
DDX49-202ENST00000593361 BARGINQ6ZT62 677 aa17.29■□□□□ 0.36
DDX49-202ENST00000593361 AEBP1Q8IUX7 1158 aa17.29■□□□□ 0.36
DDX49-202ENST00000593361 HMOX1P09601 288 aa17.28■□□□□ 0.36
DDX49-202ENST00000593361 U2AF1L5P0DN76 240 aaPredicted RBP17.28■□□□□ 0.36
DDX49-202ENST00000593361 U2AF1Q01081 240 aaKnown RBP eCLIP17.28■□□□□ 0.36
DDX49-202ENST00000593361 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.36
DDX49-202ENST00000593361 IL2RBP14784 551 aa17.27■□□□□ 0.36
DDX49-202ENST00000593361 RXRBP28702 533 aa17.27■□□□□ 0.36
DDX49-202ENST00000593361 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.36
DDX49-202ENST00000593361 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
DDX49-202ENST00000593361 OVOS2A0A0G2JMS6 1433 aa17.27■□□□□ 0.35
DDX49-202ENST00000593361 A0A0G2JS52 829 aa17.26■□□□□ 0.35
DDX49-202ENST00000593361 MYT1Q01538 1121 aa17.26■□□□□ 0.35
DDX49-202ENST00000593361 RGS12O14924 1447 aa17.26■□□□□ 0.35
DDX49-202ENST00000593361 SHANK3Q9BYB0 1731 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms