RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 FLT4P35916 1363 aa15.4■□□□□ 0.06
CACNA1A-213ENST00000593267 UPF1Q92900 1129 aaKnown RBP eCLIP15.4■□□□□ 0.06
CACNA1A-213ENST00000593267 HNRNPUQ00839 825 aaKnown RBP eCLIP15.39■□□□□ 0.05
CACNA1A-213ENST00000593267 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
CACNA1A-213ENST00000593267 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-213ENST00000593267 DIAPH1O60610 1272 aaKnown RBP15.38■□□□□ 0.05
CACNA1A-213ENST00000593267 COL22A1Q8NFW1 1626 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-213ENST00000593267 AFF2P51816 1311 aa15.38■□□□□ 0.05
CACNA1A-213ENST00000593267 ABCC6O95255 1503 aa15.38■□□□□ 0.05
CACNA1A-213ENST00000593267 SOX12O15370 315 aa15.37■□□□□ 0.05
CACNA1A-213ENST00000593267 LRRC59Q96AG4 307 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-213ENST00000593267 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
CACNA1A-213ENST00000593267 GCP02774 474 aa15.36■□□□□ 0.05
CACNA1A-213ENST00000593267 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
CACNA1A-213ENST00000593267 COL18A1P39060 1754 aa15.35■□□□□ 0.05
CACNA1A-213ENST00000593267 IL13P35225 146 aa15.35■□□□□ 0.05
CACNA1A-213ENST00000593267 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
CACNA1A-213ENST00000593267 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
CACNA1A-213ENST00000593267 CAMTA1Q9Y6Y1 1673 aa15.33■□□□□ 0.04
CACNA1A-213ENST00000593267 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.04
CACNA1A-213ENST00000593267 HOXC9P31274 260 aa15.33■□□□□ 0.04
CACNA1A-213ENST00000593267 AMPHP49418 695 aa15.33■□□□□ 0.04
CACNA1A-213ENST00000593267 EIF4A2Q14240 407 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-213ENST00000593267 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.04
CACNA1A-213ENST00000593267 ARHGEF25Q86VW2 580 aa15.33■□□□□ 0.04
CACNA1A-213ENST00000593267 RGPD5Q99666 1765 aa15.32■□□□□ 0.04
CACNA1A-213ENST00000593267 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-213ENST00000593267 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.04
CACNA1A-213ENST00000593267 CPDO75976 1380 aa15.32■□□□□ 0.04
CACNA1A-213ENST00000593267 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-213ENST00000593267 IP6K1Q92551 441 aa15.31■□□□□ 0.04
CACNA1A-213ENST00000593267 QTRT2Q9H974 415 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-213ENST00000593267 CCDC146Q8IYE0 955 aa15.3■□□□□ 0.04
CACNA1A-213ENST00000593267 LMO7Q8WWI1 1683 aa15.3■□□□□ 0.04
CACNA1A-213ENST00000593267 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
CACNA1A-213ENST00000593267 FAM208AQ9UK61 1670 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-213ENST00000593267 RBM6P78332 1123 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-213ENST00000593267 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
CACNA1A-213ENST00000593267 PLEKHF1Q96S99 279 aa15.29■□□□□ 0.04
CACNA1A-213ENST00000593267 RGPD2P0DJD1 1756 aa15.29■□□□□ 0.04
CACNA1A-213ENST00000593267 RGS12O14924 1447 aa15.28■□□□□ 0.04
CACNA1A-213ENST00000593267 FCHSD2O94868 740 aa15.28■□□□□ 0.04
CACNA1A-213ENST00000593267 ADAMTS2O95450 1211 aa15.28■□□□□ 0.04
CACNA1A-213ENST00000593267 CABLES1Q8TDN4 633 aa15.28■□□□□ 0.04
CACNA1A-213ENST00000593267 RSPH6AQ9H0K4 717 aa15.28■□□□□ 0.04
CACNA1A-213ENST00000593267 KDRP35968 1356 aa15.27■□□□□ 0.04
CACNA1A-213ENST00000593267 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.04
CACNA1A-213ENST00000593267 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-213ENST00000593267 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
CACNA1A-213ENST00000593267 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
CACNA1A-213ENST00000593267 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
CACNA1A-213ENST00000593267 KIAA0232Q92628 1395 aa15.25■□□□□ 0.03
CACNA1A-213ENST00000593267 SRCAPQ6ZRS2 3230 aa15.25■□□□□ 0.03
CACNA1A-213ENST00000593267 APAF1O14727 1248 aa15.25■□□□□ 0.03
CACNA1A-213ENST00000593267 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-213ENST00000593267 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-213ENST00000593267 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
CACNA1A-213ENST00000593267 ZBTB7CA1YPR0 619 aa15.24■□□□□ 0.03
CACNA1A-213ENST00000593267 HMOX1P09601 288 aa15.24■□□□□ 0.03
CACNA1A-213ENST00000593267 PRKAR2BP31323 418 aa15.24■□□□□ 0.03
CACNA1A-213ENST00000593267 TCP11L2Q8N4U5 519 aa15.24■□□□□ 0.03
CACNA1A-213ENST00000593267 EYA1Q99502 592 aa15.24■□□□□ 0.03
CACNA1A-213ENST00000593267 COL14A1Q05707 1796 aaKnown RBP15.24■□□□□ 0.03
CACNA1A-213ENST00000593267 DLG5Q8TDM6 1919 aa15.23■□□□□ 0.03
CACNA1A-213ENST00000593267 MAPK8IP3Q9UPT6 1336 aa15.23■□□□□ 0.03
CACNA1A-213ENST00000593267 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
CACNA1A-213ENST00000593267 AXIN2Q9Y2T1 843 aa15.23■□□□□ 0.03
CACNA1A-213ENST00000593267 ERBB3P21860 1342 aa15.22■□□□□ 0.03
CACNA1A-213ENST00000593267 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
CACNA1A-213ENST00000593267 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
CACNA1A-213ENST00000593267 USP21Q9UK80 565 aa15.22■□□□□ 0.03
CACNA1A-213ENST00000593267 ANKRD24Q8TF21 1146 aa15.21■□□□□ 0.03
CACNA1A-213ENST00000593267 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-213ENST00000593267 PLCH1Q4KWH8 1693 aa15.2■□□□□ 0.02
CACNA1A-213ENST00000593267 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-213ENST00000593267 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
CACNA1A-213ENST00000593267 CCDC27Q2M243 656 aa15.2■□□□□ 0.02
CACNA1A-213ENST00000593267 LTV1Q96GA3 475 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-213ENST00000593267 SALL2Q9Y467 1007 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-213ENST00000593267 EP400Q96L91 3159 aa15.2■□□□□ 0.02
CACNA1A-213ENST00000593267 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-213ENST00000593267 NEFMP07197 916 aa15.19■□□□□ 0.02
CACNA1A-213ENST00000593267 TMPOP42166 694 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-213ENST00000593267 CHRNA2Q15822 529 aa15.19■□□□□ 0.02
CACNA1A-213ENST00000593267 PRDM11Q9NQV5 511 aa15.19■□□□□ 0.02
CACNA1A-213ENST00000593267 NBPF6Q5VWK0 638 aa15.18■□□□□ 0.02
CACNA1A-213ENST00000593267 PHACTR3Q96KR7 559 aa15.18■□□□□ 0.02
CACNA1A-213ENST00000593267 NBPF4Q96M43 638 aa15.18■□□□□ 0.02
CACNA1A-213ENST00000593267 NFE2L2Q16236 605 aa15.17■□□□□ 0.02
CACNA1A-213ENST00000593267 WWC1Q8IX03 1113 aa15.17■□□□□ 0.02
CACNA1A-213ENST00000593267 FNBP4Q8N3X1 1017 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-213ENST00000593267 RRP7AQ9Y3A4 280 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-213ENST00000593267 NRAPQ86VF7 1730 aa15.17■□□□□ 0.02
CACNA1A-213ENST00000593267 PLEKHG2Q9H7P9 1386 aa15.16■□□□□ 0.02
CACNA1A-213ENST00000593267 NWD2Q9ULI1 1742 aa15.16■□□□□ 0.02
CACNA1A-213ENST00000593267 NEUROD2Q15784 382 aa15.15■□□□□ 0.02
CACNA1A-213ENST00000593267 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
CACNA1A-213ENST00000593267 TRIM35Q9UPQ4 493 aa15.15■□□□□ 0.02
CACNA1A-213ENST00000593267 ATRNO75882 1429 aa15.15■□□□□ 0.02
CACNA1A-213ENST00000593267 PKD1L3Q7Z443 1732 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms