RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
SF3A2-207ENST00000592839 RGPD5Q99666 1765 aa20.95■□□□□ 0.94
SF3A2-207ENST00000592839 STRN4Q9NRL3 753 aa20.95■□□□□ 0.94
SF3A2-207ENST00000592839 WDR17Q8IZU2 1322 aa20.95■□□□□ 0.94
SF3A2-207ENST00000592839 LTN1O94822 1766 aa20.95■□□□□ 0.94
SF3A2-207ENST00000592839 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
SF3A2-207ENST00000592839 MYOM1P52179 1685 aa20.93■□□□□ 0.94
SF3A2-207ENST00000592839 BCL9O00512 1426 aa20.93■□□□□ 0.94
SF3A2-207ENST00000592839 EVA1CP58658 441 aa20.92■□□□□ 0.94
SF3A2-207ENST00000592839 AXIN2Q9Y2T1 843 aa20.92■□□□□ 0.94
SF3A2-207ENST00000592839 A0A0G2JS52 829 aa20.91■□□□□ 0.94
SF3A2-207ENST00000592839 TMF1P82094 1093 aa20.91■□□□□ 0.94
SF3A2-207ENST00000592839 MYT1Q01538 1121 aa20.91■□□□□ 0.94
SF3A2-207ENST00000592839 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
SF3A2-207ENST00000592839 DEFB132Q7Z7B7 95 aa20.9■□□□□ 0.94
SF3A2-207ENST00000592839 CDCA8Q53HL2 280 aa20.89■□□□□ 0.93
SF3A2-207ENST00000592839 NME9Q86XW9 330 aa20.89■□□□□ 0.93
SF3A2-207ENST00000592839 TMC1Q8TDI8 760 aa20.89■□□□□ 0.93
SF3A2-207ENST00000592839 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.93
SF3A2-207ENST00000592839 RGPD3A6NKT7 1758 aaPredicted RBP20.88■□□□□ 0.93
SF3A2-207ENST00000592839 RGPD4Q7Z3J3 1758 aa20.88■□□□□ 0.93
SF3A2-207ENST00000592839 FAM196AQ6ZSG2 479 aa20.88■□□□□ 0.93
SF3A2-207ENST00000592839 CDCA7Q9BWT1 371 aaPredicted RBP20.88■□□□□ 0.93
SF3A2-207ENST00000592839 CARD10Q9BWT7 1032 aa20.88■□□□□ 0.93
SF3A2-207ENST00000592839 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
SF3A2-207ENST00000592839 PARD3Q8TEW0 1356 aa20.87■□□□□ 0.93
SF3A2-207ENST00000592839 CCDC7Q96M83 1385 aa20.87■□□□□ 0.93
SF3A2-207ENST00000592839 ERBB3P21860 1342 aa20.86■□□□□ 0.93
SF3A2-207ENST00000592839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.86■□□□□ 0.93
SF3A2-207ENST00000592839 SBF2Q86WG5 1849 aa20.85■□□□□ 0.93
SF3A2-207ENST00000592839 RREB1Q92766 1687 aa20.85■□□□□ 0.93
SF3A2-207ENST00000592839 BAG6P46379 1132 aa20.84■□□□□ 0.93
SF3A2-207ENST00000592839 OVOS2A0A0G2JMS6 1433 aa20.84■□□□□ 0.93
SF3A2-207ENST00000592839 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.93
SF3A2-207ENST00000592839 USP35Q9P2H5 1018 aa20.83■□□□□ 0.93
SF3A2-207ENST00000592839 TOM1L2Q6ZVM7 507 aa20.82■□□□□ 0.92
SF3A2-207ENST00000592839 TNS2Q63HR2 1409 aa20.81■□□□□ 0.92
SF3A2-207ENST00000592839 PDE3BQ13370 1112 aa20.81■□□□□ 0.92
SF3A2-207ENST00000592839 RTL1A6NKG5 1358 aa20.81■□□□□ 0.92
SF3A2-207ENST00000592839 FAM182BQ5T319 152 aa20.79■□□□□ 0.92
SF3A2-207ENST00000592839 KIF24Q5T7B8 1368 aa20.79■□□□□ 0.92
SF3A2-207ENST00000592839 ANKRD26Q9UPS8 1709 aa20.78■□□□□ 0.92
SF3A2-207ENST00000592839 IP6K1Q92551 441 aa20.78■□□□□ 0.92
SF3A2-207ENST00000592839 LRP5O75197 1615 aa20.78■□□□□ 0.92
SF3A2-207ENST00000592839 FYB1O15117 783 aa20.77■□□□□ 0.92
SF3A2-207ENST00000592839 DDB1Q16531 1140 aa20.77■□□□□ 0.92
SF3A2-207ENST00000592839 COG3Q96JB2 828 aa20.77■□□□□ 0.92
SF3A2-207ENST00000592839 CAMKK2Q96RR4 588 aa20.77■□□□□ 0.92
SF3A2-207ENST00000592839 NUP188Q5SRE5 1749 aa20.76■□□□□ 0.91
SF3A2-207ENST00000592839 SOX12O15370 315 aa20.75■□□□□ 0.91
SF3A2-207ENST00000592839 MAP3K19Q56UN5 1328 aa20.75■□□□□ 0.91
SF3A2-207ENST00000592839 ZBTB7CA1YPR0 619 aa20.74■□□□□ 0.91
SF3A2-207ENST00000592839 CCER1Q8TC90 406 aaPredicted RBP20.74■□□□□ 0.91
SF3A2-207ENST00000592839 TRIM37O94972 964 aa20.73■□□□□ 0.91
SF3A2-207ENST00000592839 EN1Q05925 392 aaPredicted RBP20.73■□□□□ 0.91
SF3A2-207ENST00000592839 ANKRD24Q8TF21 1146 aa20.72■□□□□ 0.91
SF3A2-207ENST00000592839 CARD14Q9BXL6 1004 aa20.72■□□□□ 0.91
SF3A2-207ENST00000592839 NHSQ6T4R5 1651 aa20.72■□□□□ 0.91
SF3A2-207ENST00000592839 PSDA5PKW4 1024 aaPredicted RBP20.71■□□□□ 0.91
SF3A2-207ENST00000592839 CSB-PGBD3P0DP91 1061 aa20.71■□□□□ 0.91
SF3A2-207ENST00000592839 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.91
SF3A2-207ENST00000592839 MARCH10Q8NA82 808 aaPredicted RBP20.71■□□□□ 0.91
SF3A2-207ENST00000592839 NSD3Q9BZ95 1437 aa20.7■□□□□ 0.9
SF3A2-207ENST00000592839 PLSCR1O15162 318 aa20.7■□□□□ 0.9
SF3A2-207ENST00000592839 HOXC9P31274 260 aa20.7■□□□□ 0.9
SF3A2-207ENST00000592839 NCAPD2Q15021 1401 aa20.69■□□□□ 0.9
SF3A2-207ENST00000592839 IL2RBP14784 551 aa20.68■□□□□ 0.9
SF3A2-207ENST00000592839 BCL11BQ9C0K0 894 aaPredicted RBP20.68■□□□□ 0.9
SF3A2-207ENST00000592839 INSRP06213 1382 aa20.68■□□□□ 0.9
SF3A2-207ENST00000592839 SHANK3Q9BYB0 1731 aa20.67■□□□□ 0.9
SF3A2-207ENST00000592839 EXOC5O00471 708 aa20.67■□□□□ 0.9
SF3A2-207ENST00000592839 APBA3O96018 575 aa20.67■□□□□ 0.9
SF3A2-207ENST00000592839 EZH2Q15910 746 aaKnown RBP20.67■□□□□ 0.9
SF3A2-207ENST00000592839 GGNBP2Q9H3C7 697 aa20.66■□□□□ 0.9
SF3A2-207ENST00000592839 FLT4P35916 1363 aa20.66■□□□□ 0.9
SF3A2-207ENST00000592839 RGPD2P0DJD1 1756 aa20.66■□□□□ 0.9
SF3A2-207ENST00000592839 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
SF3A2-207ENST00000592839 NLRP2Q9NX02 1062 aa20.65■□□□□ 0.9
SF3A2-207ENST00000592839 CGNL1Q0VF96 1302 aa20.63■□□□□ 0.89
SF3A2-207ENST00000592839 R3HDM1Q15032 1099 aaKnown RBP20.63■□□□□ 0.89
SF3A2-207ENST00000592839 NSD2O96028 1365 aa20.62■□□□□ 0.89
SF3A2-207ENST00000592839 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
SF3A2-207ENST00000592839 PLEKHG2Q9H7P9 1386 aa20.61■□□□□ 0.89
SF3A2-207ENST00000592839 AMPHP49418 695 aa20.61■□□□□ 0.89
SF3A2-207ENST00000592839 MEGF6O75095 1541 aa20.61■□□□□ 0.89
SF3A2-207ENST00000592839 FBLN1P23142 703 aa20.6■□□□□ 0.89
SF3A2-207ENST00000592839 MAP2P11137 1827 aaKnown RBP20.6■□□□□ 0.89
SF3A2-207ENST00000592839 RRS1Q15050 365 aaKnown RBP20.59■□□□□ 0.89
SF3A2-207ENST00000592839 BTAF1O14981 1849 aa20.59■□□□□ 0.89
SF3A2-207ENST00000592839 PAPPAQ13219 1627 aa20.59■□□□□ 0.89
SF3A2-207ENST00000592839 PKD1L3Q7Z443 1732 aa20.58■□□□□ 0.88
SF3A2-207ENST00000592839 PTF1AQ7RTS3 328 aa20.57■□□□□ 0.88
SF3A2-207ENST00000592839 WASHC2AQ641Q2 1341 aa20.56■□□□□ 0.88
SF3A2-207ENST00000592839 CASZ1Q86V15 1759 aa20.56■□□□□ 0.88
SF3A2-207ENST00000592839 HSP90AB2PQ58FF8 381 aa20.55■□□□□ 0.88
SF3A2-207ENST00000592839 NBPF14Q5TI25 921 aa20.55■□□□□ 0.88
SF3A2-207ENST00000592839 NBPF6Q5VWK0 638 aa20.55■□□□□ 0.88
SF3A2-207ENST00000592839 PROM2Q8N271 834 aa20.55■□□□□ 0.88
SF3A2-207ENST00000592839 NBPF4Q96M43 638 aa20.55■□□□□ 0.88
SF3A2-207ENST00000592839 DOT1LQ8TEK3 1739 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms