RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
TPM4-216ENST00000592822 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
TPM4-216ENST00000592822 NPC1L1Q9UHC9 1359 aa13.59□□□□□ -0.23
TPM4-216ENST00000592822 RRS1Q15050 365 aaKnown RBP13.59□□□□□ -0.23
TPM4-216ENST00000592822 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
TPM4-216ENST00000592822 TRPC5Q9UL62 973 aaPredicted RBP13.59□□□□□ -0.23
TPM4-216ENST00000592822 COL5A2P05997 1499 aaPredicted RBP13.59□□□□□ -0.23
TPM4-216ENST00000592822 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
TPM4-216ENST00000592822 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
TPM4-216ENST00000592822 VPS72Q15906 364 aa13.58□□□□□ -0.24
TPM4-216ENST00000592822 MORC1Q86VD1 984 aa13.58□□□□□ -0.24
TPM4-216ENST00000592822 IP6K1Q92551 441 aa13.58□□□□□ -0.24
TPM4-216ENST00000592822 EVA1CP58658 441 aa13.57□□□□□ -0.24
TPM4-216ENST00000592822 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
TPM4-216ENST00000592822 GLI3P10071 1580 aa13.57□□□□□ -0.24
TPM4-216ENST00000592822 HOXC9P31274 260 aa13.56□□□□□ -0.24
TPM4-216ENST00000592822 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
TPM4-216ENST00000592822 LARP1Q6PKG0 1096 aaKnown RBP13.56□□□□□ -0.24
TPM4-216ENST00000592822 GJD4Q96KN9 370 aaPredicted RBP13.56□□□□□ -0.24
TPM4-216ENST00000592822 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
TPM4-216ENST00000592822 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
TPM4-216ENST00000592822 RTL1A6NKG5 1358 aa13.56□□□□□ -0.24
TPM4-216ENST00000592822 RXRBP28702 533 aa13.55□□□□□ -0.24
TPM4-216ENST00000592822 AMPHP49418 695 aa13.55□□□□□ -0.24
TPM4-216ENST00000592822 RBM6P78332 1123 aaKnown RBP13.55□□□□□ -0.24
TPM4-216ENST00000592822 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
TPM4-216ENST00000592822 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
TPM4-216ENST00000592822 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
TPM4-216ENST00000592822 KIF24Q5T7B8 1368 aa13.55□□□□□ -0.24
TPM4-216ENST00000592822 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
TPM4-216ENST00000592822 WDR17Q8IZU2 1322 aa13.54□□□□□ -0.24
TPM4-216ENST00000592822 PPM1GO15355 546 aaPredicted RBP13.53□□□□□ -0.24
TPM4-216ENST00000592822 HSP90AB2PQ58FF8 381 aa13.53□□□□□ -0.24
TPM4-216ENST00000592822 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
TPM4-216ENST00000592822 ERBB3P21860 1342 aa13.53□□□□□ -0.24
TPM4-216ENST00000592822 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
TPM4-216ENST00000592822 FLT4P35916 1363 aa13.53□□□□□ -0.24
TPM4-216ENST00000592822 CRB1P82279 1406 aa13.53□□□□□ -0.24
TPM4-216ENST00000592822 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
TPM4-216ENST00000592822 ILDR2Q71H61 639 aa13.52□□□□□ -0.25
TPM4-216ENST00000592822 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
TPM4-216ENST00000592822 INSRP06213 1382 aa13.52□□□□□ -0.25
TPM4-216ENST00000592822 RGPD2P0DJD1 1756 aa13.52□□□□□ -0.25
TPM4-216ENST00000592822 FAM208AQ9UK61 1670 aaKnown RBP13.51□□□□□ -0.25
TPM4-216ENST00000592822 CDK12Q9NYV4 1490 aaPredicted RBP13.51□□□□□ -0.25
TPM4-216ENST00000592822 CSB-PGBD3P0DP91 1061 aa13.51□□□□□ -0.25
TPM4-216ENST00000592822 TOM1L2Q6ZVM7 507 aa13.51□□□□□ -0.25
TPM4-216ENST00000592822 RGS12O14924 1447 aa13.5□□□□□ -0.25
TPM4-216ENST00000592822 ONECUT3O60422 494 aaPredicted RBP13.5□□□□□ -0.25
TPM4-216ENST00000592822 CARD10Q9BWT7 1032 aa13.5□□□□□ -0.25
TPM4-216ENST00000592822 USP35Q9P2H5 1018 aa13.5□□□□□ -0.25
TPM4-216ENST00000592822 PARD3Q8TEW0 1356 aa13.49□□□□□ -0.25
TPM4-216ENST00000592822 MTHFSP49914 203 aa13.49□□□□□ -0.25
TPM4-216ENST00000592822 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
TPM4-216ENST00000592822 TCP11L2Q8N4U5 519 aa13.49□□□□□ -0.25
TPM4-216ENST00000592822 NLRP2Q9NX02 1062 aa13.49□□□□□ -0.25
TPM4-216ENST00000592822 THSD7AQ9UPZ6 1657 aa13.49□□□□□ -0.25
TPM4-216ENST00000592822 WNK3Q9BYP7 1800 aa13.48□□□□□ -0.25
TPM4-216ENST00000592822 BARGINQ6ZT62 677 aa13.48□□□□□ -0.25
TPM4-216ENST00000592822 PPP2R1AP30153 589 aa13.47□□□□□ -0.25
TPM4-216ENST00000592822 NBPF6Q5VWK0 638 aa13.47□□□□□ -0.25
TPM4-216ENST00000592822 NBPF4Q96M43 638 aa13.47□□□□□ -0.25
TPM4-216ENST00000592822 THRAP3Q9Y2W1 955 aaKnown RBP13.47□□□□□ -0.25
TPM4-216ENST00000592822 BRWD3Q6RI45 1802 aa13.47□□□□□ -0.25
TPM4-216ENST00000592822 EIF4A2Q14240 407 aaKnown RBP13.46□□□□□ -0.25
TPM4-216ENST00000592822 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
TPM4-216ENST00000592822 DISP2A7MBM2 1401 aa13.45□□□□□ -0.26
TPM4-216ENST00000592822 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
TPM4-216ENST00000592822 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
TPM4-216ENST00000592822 RALBP1Q15311 655 aa13.44□□□□□ -0.26
TPM4-216ENST00000592822 USHBP1Q8N6Y0 703 aa13.44□□□□□ -0.26
TPM4-216ENST00000592822 EYA1Q99502 592 aa13.44□□□□□ -0.26
TPM4-216ENST00000592822 A0A0G2JS52 829 aa13.43□□□□□ -0.26
TPM4-216ENST00000592822 IL13P35225 146 aa13.43□□□□□ -0.26
TPM4-216ENST00000592822 MYT1Q01538 1121 aa13.43□□□□□ -0.26
TPM4-216ENST00000592822 NCAPD2Q15021 1401 aa13.43□□□□□ -0.26
TPM4-216ENST00000592822 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
TPM4-216ENST00000592822 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
TPM4-216ENST00000592822 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
TPM4-216ENST00000592822 PRKRIP1Q9H875 184 aaPredicted RBP13.42□□□□□ -0.26
TPM4-216ENST00000592822 IL2RBP14784 551 aa13.41□□□□□ -0.26
TPM4-216ENST00000592822 IGSF1Q8N6C5 1336 aa13.4□□□□□ -0.26
TPM4-216ENST00000592822 MEGF6O75095 1541 aa13.4□□□□□ -0.26
TPM4-216ENST00000592822 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
TPM4-216ENST00000592822 EP400Q96L91 3159 aa13.4□□□□□ -0.26
TPM4-216ENST00000592822 MYBBP1AQ9BQG0 1328 aaKnown RBP13.39□□□□□ -0.27
TPM4-216ENST00000592822 DDB1Q16531 1140 aa13.39□□□□□ -0.27
TPM4-216ENST00000592822 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
TPM4-216ENST00000592822 CFAP53Q96M91 514 aa13.39□□□□□ -0.27
TPM4-216ENST00000592822 AEBP1Q8IUX7 1158 aa13.38□□□□□ -0.27
TPM4-216ENST00000592822 OVOS2A0A0G2JMS6 1433 aa13.38□□□□□ -0.27
TPM4-216ENST00000592822 TNS2Q63HR2 1409 aa13.38□□□□□ -0.27
TPM4-216ENST00000592822 SHANK3Q9BYB0 1731 aa13.37□□□□□ -0.27
TPM4-216ENST00000592822 EXOC5O00471 708 aa13.37□□□□□ -0.27
TPM4-216ENST00000592822 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
TPM4-216ENST00000592822 FAM182BQ5T319 152 aa13.37□□□□□ -0.27
TPM4-216ENST00000592822 RAPGEF4Q8WZA2 1011 aa13.37□□□□□ -0.27
TPM4-216ENST00000592822 KDRP35968 1356 aa13.36□□□□□ -0.27
TPM4-216ENST00000592822 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
TPM4-216ENST00000592822 U2SURPO15042 1029 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms