RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 MAP3K19Q56UN5 1328 aa28.31■■■□□ 2.12
DNMT1-227ENST00000592342 ATRNO75882 1429 aa28.31■■■□□ 2.12
DNMT1-227ENST00000592342 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.3■■■□□ 2.12
DNMT1-227ENST00000592342 CAMTA1Q9Y6Y1 1673 aa28.3■■■□□ 2.12
DNMT1-227ENST00000592342 VPS72Q15906 364 aa28.3■■■□□ 2.12
DNMT1-227ENST00000592342 ANKRD26Q9UPS8 1709 aa28.29■■■□□ 2.12
DNMT1-227ENST00000592342 LMO7Q8WWI1 1683 aa28.29■■■□□ 2.12
DNMT1-227ENST00000592342 RBM6P78332 1123 aaKnown RBP28.29■■■□□ 2.12
DNMT1-227ENST00000592342 AXIN2Q9Y2T1 843 aa28.29■■■□□ 2.12
DNMT1-227ENST00000592342 CSB-PGBD3P0DP91 1061 aa28.28■■■□□ 2.12
DNMT1-227ENST00000592342 GJD4Q96KN9 370 aaPredicted RBP28.28■■■□□ 2.12
DNMT1-227ENST00000592342 LTN1O94822 1766 aa28.28■■■□□ 2.12
DNMT1-227ENST00000592342 NRAPQ86VF7 1730 aa28.27■■■□□ 2.12
DNMT1-227ENST00000592342 IP6K1Q92551 441 aa28.27■■■□□ 2.12
DNMT1-227ENST00000592342 ABCC6O95255 1503 aa28.27■■■□□ 2.12
DNMT1-227ENST00000592342 PPM1GO15355 546 aaPredicted RBP28.26■■■□□ 2.11
DNMT1-227ENST00000592342 COL5A2P05997 1499 aaPredicted RBP28.26■■■□□ 2.11
DNMT1-227ENST00000592342 NPC1L1Q9UHC9 1359 aa28.25■■■□□ 2.11
DNMT1-227ENST00000592342 HOXC9P31274 260 aa28.25■■■□□ 2.11
DNMT1-227ENST00000592342 RTL1A6NKG5 1358 aa28.24■■■□□ 2.11
DNMT1-227ENST00000592342 COL18A1P39060 1754 aa28.24■■■□□ 2.11
DNMT1-227ENST00000592342 LARP1Q6PKG0 1096 aaKnown RBP28.24■■■□□ 2.11
DNMT1-227ENST00000592342 EMILIN1Q9Y6C2 1016 aa28.24■■■□□ 2.11
DNMT1-227ENST00000592342 TOM1L2Q6ZVM7 507 aa28.23■■■□□ 2.11
DNMT1-227ENST00000592342 BLMP54132 1417 aaPredicted RBP28.23■■■□□ 2.11
DNMT1-227ENST00000592342 USP35Q9P2H5 1018 aa28.22■■■□□ 2.11
DNMT1-227ENST00000592342 SPATA31A5Q5VU36 1347 aa28.21■■■□□ 2.11
DNMT1-227ENST00000592342 SPATA31A7Q8IWB4 1347 aa28.21■■■□□ 2.11
DNMT1-227ENST00000592342 WDR17Q8IZU2 1322 aa28.21■■■□□ 2.11
DNMT1-227ENST00000592342 LTV1Q96GA3 475 aaPredicted RBP28.21■■■□□ 2.11
DNMT1-227ENST00000592342 FLT4P35916 1363 aa28.21■■■□□ 2.11
DNMT1-227ENST00000592342 KIF24Q5T7B8 1368 aa28.21■■■□□ 2.11
DNMT1-227ENST00000592342 ANKRD24Q8TF21 1146 aa28.2■■■□□ 2.1
DNMT1-227ENST00000592342 POLKQ9UBT6 870 aa28.2■■■□□ 2.1
DNMT1-227ENST00000592342 ERBB3P21860 1342 aa28.18■■■□□ 2.1
DNMT1-227ENST00000592342 SPATA31A1Q5TZJ5 1347 aa28.18■■■□□ 2.1
DNMT1-227ENST00000592342 CRB1P82279 1406 aa28.18■■■□□ 2.1
DNMT1-227ENST00000592342 RGPD5Q99666 1765 aa28.17■■■□□ 2.1
DNMT1-227ENST00000592342 A0A0G2JS52 829 aa28.17■■■□□ 2.1
DNMT1-227ENST00000592342 MYT1Q01538 1121 aa28.17■■■□□ 2.1
DNMT1-227ENST00000592342 HSP90AB2PQ58FF8 381 aa28.16■■■□□ 2.1
DNMT1-227ENST00000592342 NLRP2Q9NX02 1062 aa28.16■■■□□ 2.1
DNMT1-227ENST00000592342 SMG6Q86US8 1419 aaKnown RBP28.16■■■□□ 2.1
DNMT1-227ENST00000592342 GLI3P10071 1580 aa28.16■■■□□ 2.1
DNMT1-227ENST00000592342 TCP11L2Q8N4U5 519 aa28.15■■■□□ 2.1
DNMT1-227ENST00000592342 MAP2P11137 1827 aaKnown RBP28.14■■■□□ 2.1
DNMT1-227ENST00000592342 FAM98CQ17RN3 349 aaKnown RBP28.14■■■□□ 2.1
DNMT1-227ENST00000592342 ILDR2Q71H61 639 aa28.14■■■□□ 2.1
DNMT1-227ENST00000592342 INSRP06213 1382 aa28.13■■■□□ 2.09
DNMT1-227ENST00000592342 PEAK1Q9H792 1746 aa28.12■■■□□ 2.09
DNMT1-227ENST00000592342 CARD10Q9BWT7 1032 aa28.12■■■□□ 2.09
DNMT1-227ENST00000592342 THRAP3Q9Y2W1 955 aaKnown RBP28.12■■■□□ 2.09
DNMT1-227ENST00000592342 CDK12Q9NYV4 1490 aaPredicted RBP28.12■■■□□ 2.09
DNMT1-227ENST00000592342 RGS12O14924 1447 aa28.1■■■□□ 2.09
DNMT1-227ENST00000592342 BARGINQ6ZT62 677 aa28.09■■■□□ 2.09
DNMT1-227ENST00000592342 MTHFSP49914 203 aa28.08■■■□□ 2.09
DNMT1-227ENST00000592342 SEPT12Q8IYM1 358 aa28.08■■■□□ 2.09
DNMT1-227ENST00000592342 ONECUT3O60422 494 aaPredicted RBP28.07■■■□□ 2.08
DNMT1-227ENST00000592342 FAM208AQ9UK61 1670 aaKnown RBP28.03■■■□□ 2.08
DNMT1-227ENST00000592342 PARD3Q8TEW0 1356 aa28.02■■■□□ 2.08
DNMT1-227ENST00000592342 PPP2R1AP30153 589 aa28.02■■■□□ 2.08
DNMT1-227ENST00000592342 EIF4A2Q14240 407 aaKnown RBP28.02■■■□□ 2.08
DNMT1-227ENST00000592342 RALBP1Q15311 655 aa28.02■■■□□ 2.08
DNMT1-227ENST00000592342 NBPF6Q5VWK0 638 aa28.02■■■□□ 2.08
DNMT1-227ENST00000592342 NBPF4Q96M43 638 aa28.02■■■□□ 2.08
DNMT1-227ENST00000592342 CDCA7Q9BWT1 371 aaPredicted RBP28.02■■■□□ 2.08
DNMT1-227ENST00000592342 IL2RBP14784 551 aa27.99■■■□□ 2.07
DNMT1-227ENST00000592342 USHBP1Q8N6Y0 703 aa27.99■■■□□ 2.07
DNMT1-227ENST00000592342 CFAP53Q96M91 514 aa27.99■■■□□ 2.07
DNMT1-227ENST00000592342 THSD7AQ9UPZ6 1657 aa27.97■■■□□ 2.07
DNMT1-227ENST00000592342 PDE3BQ13370 1112 aa27.96■■■□□ 2.07
DNMT1-227ENST00000592342 DDB1Q16531 1140 aa27.96■■■□□ 2.07
DNMT1-227ENST00000592342 KRT27Q7Z3Y8 459 aa27.96■■■□□ 2.07
DNMT1-227ENST00000592342 EYA1Q99502 592 aa27.96■■■□□ 2.07
DNMT1-227ENST00000592342 DIAPH1O60610 1272 aaKnown RBP27.95■■■□□ 2.06
DNMT1-227ENST00000592342 RAPGEF4Q8WZA2 1011 aa27.94■■■□□ 2.06
DNMT1-227ENST00000592342 RGPD2P0DJD1 1756 aa27.94■■■□□ 2.06
DNMT1-227ENST00000592342 DISP2A7MBM2 1401 aa27.93■■■□□ 2.06
DNMT1-227ENST00000592342 EXOC5O00471 708 aa27.93■■■□□ 2.06
DNMT1-227ENST00000592342 IL13P35225 146 aa27.92■■■□□ 2.06
DNMT1-227ENST00000592342 PRKRIP1Q9H875 184 aaPredicted RBP27.91■■■□□ 2.06
DNMT1-227ENST00000592342 WNK3Q9BYP7 1800 aa27.9■■■□□ 2.06
DNMT1-227ENST00000592342 TATP17735 454 aaPredicted RBP27.9■■■□□ 2.06
DNMT1-227ENST00000592342 IGSF1Q8N6C5 1336 aa27.9■■■□□ 2.06
DNMT1-227ENST00000592342 MYBBP1AQ9BQG0 1328 aaKnown RBP27.9■■■□□ 2.06
DNMT1-227ENST00000592342 PARP4Q9UKK3 1724 aaKnown RBP27.89■■■□□ 2.06
DNMT1-227ENST00000592342 BRWD3Q6RI45 1802 aa27.88■■■□□ 2.05
DNMT1-227ENST00000592342 U2SURPO15042 1029 aaKnown RBP27.87■■■□□ 2.05
DNMT1-227ENST00000592342 ANP32CO43423 234 aa27.87■■■□□ 2.05
DNMT1-227ENST00000592342 NUDCQ9Y266 331 aa27.87■■■□□ 2.05
DNMT1-227ENST00000592342 LRRC37A3O60309 1634 aa27.86■■■□□ 2.05
DNMT1-227ENST00000592342 COL3A1P02461 1466 aaPredicted RBP27.85■■■□□ 2.05
DNMT1-227ENST00000592342 FAM182BQ5T319 152 aa27.85■■■□□ 2.05
DNMT1-227ENST00000592342 MEGF6O75095 1541 aa27.85■■■□□ 2.05
DNMT1-227ENST00000592342 NCAPD2Q15021 1401 aa27.84■■■□□ 2.05
DNMT1-227ENST00000592342 TNS2Q63HR2 1409 aa27.84■■■□□ 2.05
DNMT1-227ENST00000592342 SULT6B1Q6IMI4 303 aa27.84■■■□□ 2.05
DNMT1-227ENST00000592342 ZCRB1Q8TBF4 217 aaKnown RBP27.83■■■□□ 2.05
DNMT1-227ENST00000592342 OVOS2A0A0G2JMS6 1433 aa27.83■■■□□ 2.05
DNMT1-227ENST00000592342 AEBP1Q8IUX7 1158 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms