RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 CRB1P82279 1406 aa14.43□□□□□ -0.1
VMP1-214ENST00000592106 C11orf95C9JLR9 678 aaPredicted RBP14.43□□□□□ -0.1
VMP1-214ENST00000592106 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
VMP1-214ENST00000592106 LARP1Q6PKG0 1096 aaKnown RBP14.43□□□□□ -0.1
VMP1-214ENST00000592106 LRP5O75197 1615 aa14.43□□□□□ -0.1
VMP1-214ENST00000592106 AATKQ6ZMQ8 1374 aa14.43□□□□□ -0.1
VMP1-214ENST00000592106 TONSLQ96HA7 1378 aa14.43□□□□□ -0.1
VMP1-214ENST00000592106 SBNO2Q9Y2G9 1366 aa14.43□□□□□ -0.1
VMP1-214ENST00000592106 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
VMP1-214ENST00000592106 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
VMP1-214ENST00000592106 KCNH5Q8NCM2 988 aa14.42□□□□□ -0.1
VMP1-214ENST00000592106 PARD3Q8TEW0 1356 aa14.42□□□□□ -0.1
VMP1-214ENST00000592106 AKAP12Q02952 1782 aa14.42□□□□□ -0.1
VMP1-214ENST00000592106 PARP4Q9UKK3 1724 aaKnown RBP14.41□□□□□ -0.1
VMP1-214ENST00000592106 CPSF1Q10570 1443 aaKnown RBP14.41□□□□□ -0.1
VMP1-214ENST00000592106 TRIM37O94972 964 aa14.4□□□□□ -0.1
VMP1-214ENST00000592106 CARD11Q9BXL7 1154 aa14.4□□□□□ -0.1
VMP1-214ENST00000592106 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
VMP1-214ENST00000592106 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
VMP1-214ENST00000592106 ABCC6O95255 1503 aa14.38□□□□□ -0.11
VMP1-214ENST00000592106 PSDA5PKW4 1024 aaPredicted RBP14.38□□□□□ -0.11
VMP1-214ENST00000592106 APBA3O96018 575 aa14.38□□□□□ -0.11
VMP1-214ENST00000592106 TOM1L2Q6ZVM7 507 aa14.38□□□□□ -0.11
VMP1-214ENST00000592106 OVOS2A0A0G2JMS6 1433 aa14.38□□□□□ -0.11
VMP1-214ENST00000592106 OVOS2A0A0J9YW53 1432 aa14.38□□□□□ -0.11
VMP1-214ENST00000592106 OVOS2Q6IE36 1432 aa14.38□□□□□ -0.11
VMP1-214ENST00000592106 EZH2Q15910 746 aaKnown RBP14.37□□□□□ -0.11
VMP1-214ENST00000592106 CDCA7Q9BWT1 371 aaPredicted RBP14.37□□□□□ -0.11
VMP1-214ENST00000592106 MON2Q7Z3U7 1717 aa14.37□□□□□ -0.11
VMP1-214ENST00000592106 WDR17Q8IZU2 1322 aa14.37□□□□□ -0.11
VMP1-214ENST00000592106 ZBTB12Q9Y330 459 aaPredicted RBP14.36□□□□□ -0.11
VMP1-214ENST00000592106 COL18A1P39060 1754 aa14.35□□□□□ -0.11
VMP1-214ENST00000592106 LRRC37A3O60309 1634 aa14.35□□□□□ -0.11
VMP1-214ENST00000592106 CSB-PGBD3P0DP91 1061 aa14.35□□□□□ -0.11
VMP1-214ENST00000592106 DDB1Q16531 1140 aa14.35□□□□□ -0.11
VMP1-214ENST00000592106 HDGFL2Q7Z4V5 671 aaPredicted RBP14.35□□□□□ -0.11
VMP1-214ENST00000592106 CAMKK2Q96RR4 588 aa14.35□□□□□ -0.11
VMP1-214ENST00000592106 WNK3Q9BYP7 1800 aa14.35□□□□□ -0.11
VMP1-214ENST00000592106 RREB1Q92766 1687 aa14.34□□□□□ -0.11
VMP1-214ENST00000592106 SOX12O15370 315 aa14.34□□□□□ -0.11
VMP1-214ENST00000592106 R3HDM1Q15032 1099 aaKnown RBP14.34□□□□□ -0.11
VMP1-214ENST00000592106 NBPF14Q5TI25 921 aa14.34□□□□□ -0.11
VMP1-214ENST00000592106 ARHGEF25Q86VW2 580 aa14.34□□□□□ -0.11
VMP1-214ENST00000592106 NFAT5O94916 1531 aa14.33□□□□□ -0.12
VMP1-214ENST00000592106 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
VMP1-214ENST00000592106 TMC1Q8TDI8 760 aa14.33□□□□□ -0.12
VMP1-214ENST00000592106 USP31Q70CQ4 1352 aa14.33□□□□□ -0.12
VMP1-214ENST00000592106 CCDC7Q96M83 1385 aa14.33□□□□□ -0.12
VMP1-214ENST00000592106 USP54Q70EL1 1684 aa14.33□□□□□ -0.12
VMP1-214ENST00000592106 TERF2IPQ9NYB0 399 aa14.32□□□□□ -0.12
VMP1-214ENST00000592106 NINLQ9Y2I6 1382 aa14.32□□□□□ -0.12
VMP1-214ENST00000592106 NUP188Q5SRE5 1749 aa14.32□□□□□ -0.12
VMP1-214ENST00000592106 EDC4Q6P2E9 1401 aaKnown RBP14.32□□□□□ -0.12
VMP1-214ENST00000592106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.31□□□□□ -0.12
VMP1-214ENST00000592106 PUS7Q96PZ0 661 aaKnown RBP14.31□□□□□ -0.12
VMP1-214ENST00000592106 CARD10Q9BWT7 1032 aa14.31□□□□□ -0.12
VMP1-214ENST00000592106 PEAK1Q9H792 1746 aa14.3□□□□□ -0.12
VMP1-214ENST00000592106 RGPD3A6NKT7 1758 aaPredicted RBP14.3□□□□□ -0.12
VMP1-214ENST00000592106 RGPD4Q7Z3J3 1758 aa14.3□□□□□ -0.12
VMP1-214ENST00000592106 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
VMP1-214ENST00000592106 CD163L1Q9NR16 1453 aa14.29□□□□□ -0.12
VMP1-214ENST00000592106 RGPD5Q99666 1765 aa14.29□□□□□ -0.12
VMP1-214ENST00000592106 BCL9O00512 1426 aa14.28□□□□□ -0.12
VMP1-214ENST00000592106 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
VMP1-214ENST00000592106 TNS2Q63HR2 1409 aa14.28□□□□□ -0.12
VMP1-214ENST00000592106 A0A1W2PP64 1363 aa14.27□□□□□ -0.12
VMP1-214ENST00000592106 NME9Q86XW9 330 aa14.27□□□□□ -0.13
VMP1-214ENST00000592106 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.13
VMP1-214ENST00000592106 SBF2Q86WG5 1849 aa14.27□□□□□ -0.13
VMP1-214ENST00000592106 LTN1O94822 1766 aa14.27□□□□□ -0.13
VMP1-214ENST00000592106 EXOC5O00471 708 aa14.26□□□□□ -0.13
VMP1-214ENST00000592106 PLSCR1O15162 318 aa14.26□□□□□ -0.13
VMP1-214ENST00000592106 SLC12A5Q9H2X9 1139 aa14.26□□□□□ -0.13
VMP1-214ENST00000592106 ERBB3P21860 1342 aa14.25□□□□□ -0.13
VMP1-214ENST00000592106 MARCH10Q8NA82 808 aaPredicted RBP14.24□□□□□ -0.13
VMP1-214ENST00000592106 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
VMP1-214ENST00000592106 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
VMP1-214ENST00000592106 ANKRD24Q8TF21 1146 aa14.23□□□□□ -0.13
VMP1-214ENST00000592106 SRCAPQ6ZRS2 3230 aa14.23□□□□□ -0.13
VMP1-214ENST00000592106 FAM208AQ9UK61 1670 aaKnown RBP14.23□□□□□ -0.13
VMP1-214ENST00000592106 IL2RBP14784 551 aa14.22□□□□□ -0.13
VMP1-214ENST00000592106 COG3Q96JB2 828 aa14.22□□□□□ -0.13
VMP1-214ENST00000592106 TMF1P82094 1093 aa14.21□□□□□ -0.13
VMP1-214ENST00000592106 TESK2Q96S53 571 aa14.21□□□□□ -0.13
VMP1-214ENST00000592106 SPON1Q9HCB6 807 aa14.21□□□□□ -0.13
VMP1-214ENST00000592106 PPP1R1BQ9UD71 204 aaPredicted RBP14.21□□□□□ -0.13
VMP1-214ENST00000592106 ANKRD36BQ8N2N9 1353 aa14.21□□□□□ -0.14
VMP1-214ENST00000592106 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
VMP1-214ENST00000592106 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
VMP1-214ENST00000592106 USP47Q96K76 1375 aa14.2□□□□□ -0.14
VMP1-214ENST00000592106 KCNQ2O43526 872 aa14.18□□□□□ -0.14
VMP1-214ENST00000592106 IP6K1Q92551 441 aa14.18□□□□□ -0.14
VMP1-214ENST00000592106 STK32BQ9NY57 414 aa14.18□□□□□ -0.14
VMP1-214ENST00000592106 AMPHP49418 695 aa14.17□□□□□ -0.14
VMP1-214ENST00000592106 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
VMP1-214ENST00000592106 TXNRD1Q16881 649 aa14.16□□□□□ -0.14
VMP1-214ENST00000592106 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
VMP1-214ENST00000592106 SMG6Q86US8 1419 aaKnown RBP14.15□□□□□ -0.14
VMP1-214ENST00000592106 PTF1AQ7RTS3 328 aa14.15□□□□□ -0.14
VMP1-214ENST00000592106 LTV1Q96GA3 475 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms