RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CRB1P82279 1406 aa19.45■□□□□ 0.7
CLIP3-205ENST00000592017 PDE3BQ13370 1112 aa19.45■□□□□ 0.7
CLIP3-205ENST00000592017 NINLQ9Y2I6 1382 aa19.44■□□□□ 0.7
CLIP3-205ENST00000592017 EIF4G2P78344 907 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLIP3-205ENST00000592017 FAM196AQ6ZSG2 479 aa19.44■□□□□ 0.7
CLIP3-205ENST00000592017 TOM1L2Q6ZVM7 507 aa19.44■□□□□ 0.7
CLIP3-205ENST00000592017 WDR17Q8IZU2 1322 aa19.44■□□□□ 0.7
CLIP3-205ENST00000592017 EDC4Q6P2E9 1401 aaKnown RBP19.43■□□□□ 0.7
CLIP3-205ENST00000592017 NFAT5O94916 1531 aa19.43■□□□□ 0.7
CLIP3-205ENST00000592017 CDCA8Q53HL2 280 aa19.43■□□□□ 0.7
CLIP3-205ENST00000592017 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
CLIP3-205ENST00000592017 TRIM37O94972 964 aa19.42■□□□□ 0.7
CLIP3-205ENST00000592017 HSPA5P11021 654 aaKnown RBP19.42■□□□□ 0.7
CLIP3-205ENST00000592017 BAG6P46379 1132 aa19.42■□□□□ 0.7
CLIP3-205ENST00000592017 EN1Q05925 392 aaPredicted RBP19.41■□□□□ 0.7
CLIP3-205ENST00000592017 COL18A1P39060 1754 aa19.41■□□□□ 0.7
CLIP3-205ENST00000592017 POLR3GLQ9BT43 218 aa19.4■□□□□ 0.7
CLIP3-205ENST00000592017 CARD10Q9BWT7 1032 aa19.4■□□□□ 0.7
CLIP3-205ENST00000592017 CSB-PGBD3P0DP91 1061 aa19.39■□□□□ 0.69
CLIP3-205ENST00000592017 ANKRD36BQ8N2N9 1353 aa19.38■□□□□ 0.69
CLIP3-205ENST00000592017 OVOS2A0A0J9YW53 1432 aa19.36■□□□□ 0.69
CLIP3-205ENST00000592017 OVOS2Q6IE36 1432 aa19.36■□□□□ 0.69
CLIP3-205ENST00000592017 DISP2A7MBM2 1401 aa19.35■□□□□ 0.69
CLIP3-205ENST00000592017 APBA3O96018 575 aa19.35■□□□□ 0.69
CLIP3-205ENST00000592017 EZH2Q15910 746 aaKnown RBP19.35■□□□□ 0.69
CLIP3-205ENST00000592017 DDB1Q16531 1140 aa19.35■□□□□ 0.69
CLIP3-205ENST00000592017 CAMKK2Q96RR4 588 aa19.35■□□□□ 0.69
CLIP3-205ENST00000592017 FBLN1P23142 703 aa19.34■□□□□ 0.69
CLIP3-205ENST00000592017 ERBB3P21860 1342 aa19.33■□□□□ 0.69
CLIP3-205ENST00000592017 MARCH10Q8NA82 808 aaPredicted RBP19.33■□□□□ 0.68
CLIP3-205ENST00000592017 COG3Q96JB2 828 aa19.33■□□□□ 0.68
CLIP3-205ENST00000592017 CDCA7Q9BWT1 371 aaPredicted RBP19.33■□□□□ 0.68
CLIP3-205ENST00000592017 ANKRD24Q8TF21 1146 aa19.32■□□□□ 0.68
CLIP3-205ENST00000592017 NLRP2Q9NX02 1062 aa19.32■□□□□ 0.68
CLIP3-205ENST00000592017 MYOM1P52179 1685 aa19.31■□□□□ 0.68
CLIP3-205ENST00000592017 USP54Q70EL1 1684 aa19.31■□□□□ 0.68
CLIP3-205ENST00000592017 PSDA5PKW4 1024 aaPredicted RBP19.31■□□□□ 0.68
CLIP3-205ENST00000592017 FYB1O15117 783 aa19.31■□□□□ 0.68
CLIP3-205ENST00000592017 IP6K1Q92551 441 aa19.31■□□□□ 0.68
CLIP3-205ENST00000592017 CCDC7Q96M83 1385 aa19.31■□□□□ 0.68
CLIP3-205ENST00000592017 ABCC6O95255 1503 aa19.3■□□□□ 0.68
CLIP3-205ENST00000592017 PTF1AQ7RTS3 328 aa19.3■□□□□ 0.68
CLIP3-205ENST00000592017 CARD14Q9BXL6 1004 aa19.3■□□□□ 0.68
CLIP3-205ENST00000592017 MAP3K19Q56UN5 1328 aa19.29■□□□□ 0.68
CLIP3-205ENST00000592017 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
CLIP3-205ENST00000592017 C11orf95C9JLR9 678 aaPredicted RBP19.29■□□□□ 0.68
CLIP3-205ENST00000592017 GGNBP2Q9H3C7 697 aa19.29■□□□□ 0.68
CLIP3-205ENST00000592017 RGPD1P0DJD0 1748 aa19.28■□□□□ 0.68
CLIP3-205ENST00000592017 OVOS2A0A0G2JMS6 1433 aa19.28■□□□□ 0.68
CLIP3-205ENST00000592017 NSD3Q9BZ95 1437 aa19.28■□□□□ 0.68
CLIP3-205ENST00000592017 EXOC5O00471 708 aa19.28■□□□□ 0.68
CLIP3-205ENST00000592017 LTV1Q96GA3 475 aaPredicted RBP19.27■□□□□ 0.68
CLIP3-205ENST00000592017 TNS1Q9HBL0 1735 aaKnown RBP19.27■□□□□ 0.68
CLIP3-205ENST00000592017 R3HDM1Q15032 1099 aaKnown RBP19.26■□□□□ 0.67
CLIP3-205ENST00000592017 PARD3Q8TEW0 1356 aa19.26■□□□□ 0.67
CLIP3-205ENST00000592017 RGPD5Q99666 1765 aa19.26■□□□□ 0.67
CLIP3-205ENST00000592017 LRRC37A3O60309 1634 aa19.25■□□□□ 0.67
CLIP3-205ENST00000592017 HOXC9P31274 260 aa19.25■□□□□ 0.67
CLIP3-205ENST00000592017 AMPHP49418 695 aa19.25■□□□□ 0.67
CLIP3-205ENST00000592017 BCL11BQ9C0K0 894 aaPredicted RBP19.25■□□□□ 0.67
CLIP3-205ENST00000592017 IL2RBP14784 551 aa19.24■□□□□ 0.67
CLIP3-205ENST00000592017 RRS1Q15050 365 aaKnown RBP19.24■□□□□ 0.67
CLIP3-205ENST00000592017 PEAK1Q9H792 1746 aa19.24■□□□□ 0.67
CLIP3-205ENST00000592017 BCL9O00512 1426 aa19.24■□□□□ 0.67
CLIP3-205ENST00000592017 TNS2Q63HR2 1409 aa19.21■□□□□ 0.67
CLIP3-205ENST00000592017 PLSCR1O15162 318 aa19.2■□□□□ 0.66
CLIP3-205ENST00000592017 KCNQ2O43526 872 aa19.2■□□□□ 0.66
CLIP3-205ENST00000592017 KIF7Q2M1P5 1343 aa19.2■□□□□ 0.66
CLIP3-205ENST00000592017 PROM2Q8N271 834 aa19.19■□□□□ 0.66
CLIP3-205ENST00000592017 LTN1O94822 1766 aa19.19■□□□□ 0.66
CLIP3-205ENST00000592017 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
CLIP3-205ENST00000592017 PANK3Q9H999 370 aa19.18■□□□□ 0.66
CLIP3-205ENST00000592017 CGNL1Q0VF96 1302 aa19.18■□□□□ 0.66
CLIP3-205ENST00000592017 HSP90AB2PQ58FF8 381 aa19.17■□□□□ 0.66
CLIP3-205ENST00000592017 RTL1A6NKG5 1358 aa19.17■□□□□ 0.66
CLIP3-205ENST00000592017 NBPF14Q5TI25 921 aa19.16■□□□□ 0.66
CLIP3-205ENST00000592017 NBPF6Q5VWK0 638 aa19.16■□□□□ 0.66
CLIP3-205ENST00000592017 ACSBG1Q96GR2 724 aa19.16■□□□□ 0.66
CLIP3-205ENST00000592017 NBPF4Q96M43 638 aa19.16■□□□□ 0.66
CLIP3-205ENST00000592017 WNK3Q9BYP7 1800 aa19.16■□□□□ 0.66
CLIP3-205ENST00000592017 DDX54Q8TDD1 881 aaKnown RBP19.15■□□□□ 0.66
CLIP3-205ENST00000592017 USHBP1Q8N6Y0 703 aa19.13■□□□□ 0.65
CLIP3-205ENST00000592017 EMILIN1Q9Y6C2 1016 aa19.13■□□□□ 0.65
CLIP3-205ENST00000592017 INSRP06213 1382 aa19.12■□□□□ 0.65
CLIP3-205ENST00000592017 TXNRD1Q16881 649 aa19.12■□□□□ 0.65
CLIP3-205ENST00000592017 ANO8Q9HCE9 1232 aaPredicted RBP19.12■□□□□ 0.65
CLIP3-205ENST00000592017 RREB1Q92766 1687 aa19.11■□□□□ 0.65
CLIP3-205ENST00000592017 FLT4P35916 1363 aa19.1■□□□□ 0.65
CLIP3-205ENST00000592017 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
CLIP3-205ENST00000592017 ZCRB1Q8TBF4 217 aaKnown RBP19.1■□□□□ 0.65
CLIP3-205ENST00000592017 MEGF6O75095 1541 aa19.1■□□□□ 0.65
CLIP3-205ENST00000592017 SBF2Q86WG5 1849 aa19.09■□□□□ 0.65
CLIP3-205ENST00000592017 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
CLIP3-205ENST00000592017 NUP188Q5SRE5 1749 aa19.08■□□□□ 0.65
CLIP3-205ENST00000592017 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.65
CLIP3-205ENST00000592017 PPM1GO15355 546 aaPredicted RBP19.08■□□□□ 0.64
CLIP3-205ENST00000592017 KNSTRNQ9Y448 316 aa19.08■□□□□ 0.64
CLIP3-205ENST00000592017 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
CLIP3-205ENST00000592017 SMG6Q86US8 1419 aaKnown RBP19.07■□□□□ 0.64
CLIP3-205ENST00000592017 LRP5O75197 1615 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms