RNA–Protein interactions for RNA: ENST00000591749.1

LAMA3-212, Transcript of laminin subunit alpha 3, humanhuman

TSL 4

Gene LAMA3, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-212ENST00000591749 DDB1Q16531 1140 aa17.48■□□□□ 0.39
LAMA3-212ENST00000591749 KAT6BQ8WYB5 2073 aa17.48■□□□□ 0.39
LAMA3-212ENST00000591749 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
LAMA3-212ENST00000591749 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
LAMA3-212ENST00000591749 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
LAMA3-212ENST00000591749 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
LAMA3-212ENST00000591749 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.39
LAMA3-212ENST00000591749 ARHGEF25Q86VW2 580 aa17.46■□□□□ 0.39
LAMA3-212ENST00000591749 PLSCR1O15162 318 aa17.45■□□□□ 0.38
LAMA3-212ENST00000591749 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
LAMA3-212ENST00000591749 SOX12O15370 315 aa17.44■□□□□ 0.38
LAMA3-212ENST00000591749 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
LAMA3-212ENST00000591749 KCNH5Q8NCM2 988 aa17.44■□□□□ 0.38
LAMA3-212ENST00000591749 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
LAMA3-212ENST00000591749 BCL11BQ9C0K0 894 aaPredicted RBP17.43■□□□□ 0.38
LAMA3-212ENST00000591749 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
LAMA3-212ENST00000591749 TTC21AQ8NDW8 1320 aa17.43■□□□□ 0.38
LAMA3-212ENST00000591749 NFAT5O94916 1531 aa17.42■□□□□ 0.38
LAMA3-212ENST00000591749 KCNQ2O43526 872 aa17.42■□□□□ 0.38
LAMA3-212ENST00000591749 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
LAMA3-212ENST00000591749 SPON1Q9HCB6 807 aa17.42■□□□□ 0.38
LAMA3-212ENST00000591749 CARD10Q9BWT7 1032 aa17.41■□□□□ 0.38
LAMA3-212ENST00000591749 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
LAMA3-212ENST00000591749 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
LAMA3-212ENST00000591749 ANO8Q9HCE9 1232 aaPredicted RBP17.4■□□□□ 0.38
LAMA3-212ENST00000591749 LTN1O94822 1766 aa17.4■□□□□ 0.38
LAMA3-212ENST00000591749 CASZ1Q86V15 1759 aa17.4■□□□□ 0.38
LAMA3-212ENST00000591749 BCL9O00512 1426 aa17.39■□□□□ 0.38
LAMA3-212ENST00000591749 PROM2Q8N271 834 aa17.39■□□□□ 0.37
LAMA3-212ENST00000591749 PPP1R1BQ9UD71 204 aaPredicted RBP17.39■□□□□ 0.37
LAMA3-212ENST00000591749 USP54Q70EL1 1684 aa17.38■□□□□ 0.37
LAMA3-212ENST00000591749 ABCC6O95255 1503 aa17.37■□□□□ 0.37
LAMA3-212ENST00000591749 EXOC5O00471 708 aa17.37■□□□□ 0.37
LAMA3-212ENST00000591749 UTRNP46939 3433 aa17.37■□□□□ 0.37
LAMA3-212ENST00000591749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.37
LAMA3-212ENST00000591749 PDGFDQ9GZP0 370 aaPredicted RBP17.36■□□□□ 0.37
LAMA3-212ENST00000591749 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
LAMA3-212ENST00000591749 SBNO2Q9Y2G9 1366 aa17.35■□□□□ 0.37
LAMA3-212ENST00000591749 CD163L1Q9NR16 1453 aa17.35■□□□□ 0.37
LAMA3-212ENST00000591749 TNS2Q63HR2 1409 aa17.34■□□□□ 0.37
LAMA3-212ENST00000591749 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
LAMA3-212ENST00000591749 NINLQ9Y2I6 1382 aa17.34■□□□□ 0.37
LAMA3-212ENST00000591749 NHSQ6T4R5 1651 aa17.33■□□□□ 0.37
LAMA3-212ENST00000591749 YY1P25490 414 aa17.33■□□□□ 0.36
LAMA3-212ENST00000591749 TXNRD1Q16881 649 aa17.33■□□□□ 0.36
LAMA3-212ENST00000591749 NME9Q86XW9 330 aa17.33■□□□□ 0.36
LAMA3-212ENST00000591749 CARD11Q9BXL7 1154 aa17.32■□□□□ 0.36
LAMA3-212ENST00000591749 ERBB3P21860 1342 aa17.31■□□□□ 0.36
LAMA3-212ENST00000591749 ZBTB7AO95365 584 aa17.31■□□□□ 0.36
LAMA3-212ENST00000591749 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
LAMA3-212ENST00000591749 BTAF1O14981 1849 aa17.31■□□□□ 0.36
LAMA3-212ENST00000591749 MYOM1P52179 1685 aa17.3■□□□□ 0.36
LAMA3-212ENST00000591749 SLC12A5Q9H2X9 1139 aa17.3■□□□□ 0.36
LAMA3-212ENST00000591749 NLRP2Q9NX02 1062 aa17.3■□□□□ 0.36
LAMA3-212ENST00000591749 STK32BQ9NY57 414 aa17.3■□□□□ 0.36
LAMA3-212ENST00000591749 SLC15A2Q16348 729 aa17.29■□□□□ 0.36
LAMA3-212ENST00000591749 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
LAMA3-212ENST00000591749 ACSBG1Q96GR2 724 aa17.29■□□□□ 0.36
LAMA3-212ENST00000591749 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
LAMA3-212ENST00000591749 PTGER2P43116 358 aa17.28■□□□□ 0.36
LAMA3-212ENST00000591749 ANKRD24Q8TF21 1146 aa17.28■□□□□ 0.36
LAMA3-212ENST00000591749 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
LAMA3-212ENST00000591749 EDC4Q6P2E9 1401 aaKnown RBP17.28■□□□□ 0.36
LAMA3-212ENST00000591749 IL2RBP14784 551 aa17.27■□□□□ 0.36
LAMA3-212ENST00000591749 A0A1W2PP64 1363 aa17.26■□□□□ 0.35
LAMA3-212ENST00000591749 TERF2IPQ9NYB0 399 aa17.25■□□□□ 0.35
LAMA3-212ENST00000591749 PAPPAQ13219 1627 aa17.25■□□□□ 0.35
LAMA3-212ENST00000591749 CHD4Q14839 1912 aa17.24■□□□□ 0.35
LAMA3-212ENST00000591749 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
LAMA3-212ENST00000591749 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
LAMA3-212ENST00000591749 PUS7Q96PZ0 661 aaKnown RBP17.23■□□□□ 0.35
LAMA3-212ENST00000591749 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
LAMA3-212ENST00000591749 IP6K1Q92551 441 aa17.22■□□□□ 0.35
LAMA3-212ENST00000591749 MTFR1LQ9H019 292 aa17.22■□□□□ 0.35
LAMA3-212ENST00000591749 SGIP1Q9BQI5 828 aa17.21■□□□□ 0.35
LAMA3-212ENST00000591749 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
LAMA3-212ENST00000591749 SYT17Q9BSW7 474 aa17.2■□□□□ 0.34
LAMA3-212ENST00000591749 FHDC1Q9C0D6 1143 aaPredicted RBP17.2■□□□□ 0.34
LAMA3-212ENST00000591749 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
LAMA3-212ENST00000591749 TESK2Q96S53 571 aa17.19■□□□□ 0.34
LAMA3-212ENST00000591749 LRRC4BQ9NT99 713 aa17.19■□□□□ 0.34
LAMA3-212ENST00000591749 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
LAMA3-212ENST00000591749 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
LAMA3-212ENST00000591749 DDX54Q8TDD1 881 aaKnown RBP17.18■□□□□ 0.34
LAMA3-212ENST00000591749 TUBGCP6Q96RT7 1819 aa17.18■□□□□ 0.34
LAMA3-212ENST00000591749 SHANK3Q9BYB0 1731 aa17.18■□□□□ 0.34
LAMA3-212ENST00000591749 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
LAMA3-212ENST00000591749 FBLN1P23142 703 aa17.17■□□□□ 0.34
LAMA3-212ENST00000591749 DOT1LQ8TEK3 1739 aa17.16■□□□□ 0.34
LAMA3-212ENST00000591749 COG3Q96JB2 828 aa17.16■□□□□ 0.34
LAMA3-212ENST00000591749 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
LAMA3-212ENST00000591749 HOXC9P31274 260 aa17.15■□□□□ 0.34
LAMA3-212ENST00000591749 ARXQ96QS3 562 aa17.15■□□□□ 0.34
LAMA3-212ENST00000591749 LY75O60449 1722 aa17.15■□□□□ 0.34
LAMA3-212ENST00000591749 COL24A1Q17RW2 1714 aa17.14■□□□□ 0.33
LAMA3-212ENST00000591749 AMPHP49418 695 aa17.14■□□□□ 0.33
LAMA3-212ENST00000591749 AKT1S1Q96B36 256 aa17.14■□□□□ 0.33
LAMA3-212ENST00000591749 SLC27A3Q5K4L6 730 aa17.13■□□□□ 0.33
LAMA3-212ENST00000591749 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
LAMA3-212ENST00000591749 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms