RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 BCL11BQ9C0K0 894 aaPredicted RBP24.71■■□□□ 1.55
POLR2E-208ENST00000591709 UTRNP46939 3433 aa24.7■■□□□ 1.55
POLR2E-208ENST00000591709 KAT6BQ8WYB5 2073 aa24.7■■□□□ 1.54
POLR2E-208ENST00000591709 STAC3Q96MF2 364 aa24.69■■□□□ 1.54
POLR2E-208ENST00000591709 PTGER2P43116 358 aa24.68■■□□□ 1.54
POLR2E-208ENST00000591709 AATKQ6ZMQ8 1374 aa24.67■■□□□ 1.54
POLR2E-208ENST00000591709 TOM1L2Q6ZVM7 507 aa24.67■■□□□ 1.54
POLR2E-208ENST00000591709 ATF5Q9Y2D1 282 aaPredicted RBP24.67■■□□□ 1.54
POLR2E-208ENST00000591709 NHSQ6T4R5 1651 aa24.66■■□□□ 1.54
POLR2E-208ENST00000591709 PROM2Q8N271 834 aa24.66■■□□□ 1.54
POLR2E-208ENST00000591709 USP6P35125 1406 aa24.65■■□□□ 1.54
POLR2E-208ENST00000591709 SRPK2P78362 688 aaKnown RBP24.65■■□□□ 1.54
POLR2E-208ENST00000591709 FHDC1Q9C0D6 1143 aaPredicted RBP24.64■■□□□ 1.54
POLR2E-208ENST00000591709 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
POLR2E-208ENST00000591709 MARCH10Q8NA82 808 aaPredicted RBP24.63■■□□□ 1.53
POLR2E-208ENST00000591709 BCL9O00512 1426 aa24.62■■□□□ 1.53
POLR2E-208ENST00000591709 NLRP6P59044 892 aa24.62■■□□□ 1.53
POLR2E-208ENST00000591709 STK32BQ9NY57 414 aa24.62■■□□□ 1.53
POLR2E-208ENST00000591709 BRD4O60885 1362 aaPredicted RBP24.62■■□□□ 1.53
POLR2E-208ENST00000591709 WDR17Q8IZU2 1322 aa24.61■■□□□ 1.53
POLR2E-208ENST00000591709 CPSF1Q10570 1443 aaKnown RBP24.61■■□□□ 1.53
POLR2E-208ENST00000591709 PAPPAQ13219 1627 aa24.61■■□□□ 1.53
POLR2E-208ENST00000591709 BTAF1O14981 1849 aa24.61■■□□□ 1.53
POLR2E-208ENST00000591709 SYT17Q9BSW7 474 aa24.61■■□□□ 1.53
POLR2E-208ENST00000591709 CABP2Q9NPB3 220 aa24.61■■□□□ 1.53
POLR2E-208ENST00000591709 TXNRD1Q16881 649 aa24.6■■□□□ 1.53
POLR2E-208ENST00000591709 TRPM1Q7Z4N2 1603 aa24.59■■□□□ 1.53
POLR2E-208ENST00000591709 SLC15A2Q16348 729 aa24.58■■□□□ 1.53
POLR2E-208ENST00000591709 AXIN2Q9Y2T1 843 aa24.58■■□□□ 1.53
POLR2E-208ENST00000591709 CDCA7Q9BWT1 371 aaPredicted RBP24.56■■□□□ 1.52
POLR2E-208ENST00000591709 MTFR1LQ9H019 292 aa24.56■■□□□ 1.52
POLR2E-208ENST00000591709 CENPJQ9HC77 1338 aaPredicted RBP24.56■■□□□ 1.52
POLR2E-208ENST00000591709 TNS2Q63HR2 1409 aa24.55■■□□□ 1.52
POLR2E-208ENST00000591709 NBPF1Q3BBV0 1214 aa24.55■■□□□ 1.52
POLR2E-208ENST00000591709 TUBGCP6Q96RT7 1819 aa24.54■■□□□ 1.52
POLR2E-208ENST00000591709 SGIP1Q9BQI5 828 aa24.54■■□□□ 1.52
POLR2E-208ENST00000591709 QSER1Q2KHR3 1735 aa24.54■■□□□ 1.52
POLR2E-208ENST00000591709 LTN1O94822 1766 aa24.54■■□□□ 1.52
POLR2E-208ENST00000591709 C1QTNF8P60827 252 aa24.53■■□□□ 1.52
POLR2E-208ENST00000591709 CABP1Q9NZU7 370 aa24.53■■□□□ 1.52
POLR2E-208ENST00000591709 ABCC6O95255 1503 aa24.52■■□□□ 1.52
POLR2E-208ENST00000591709 CSB-PGBD3P0DP91 1061 aa24.52■■□□□ 1.52
POLR2E-208ENST00000591709 NFAT5O94916 1531 aa24.51■■□□□ 1.51
POLR2E-208ENST00000591709 SOX12O15370 315 aa24.51■■□□□ 1.51
POLR2E-208ENST00000591709 CARD10Q9BWT7 1032 aa24.5■■□□□ 1.51
POLR2E-208ENST00000591709 COL24A1Q17RW2 1714 aa24.49■■□□□ 1.51
POLR2E-208ENST00000591709 ARHGEF25Q86VW2 580 aa24.49■■□□□ 1.51
POLR2E-208ENST00000591709 MON2Q7Z3U7 1717 aa24.49■■□□□ 1.51
POLR2E-208ENST00000591709 EXOC5O00471 708 aa24.48■■□□□ 1.51
POLR2E-208ENST00000591709 ARXQ96QS3 562 aa24.48■■□□□ 1.51
POLR2E-208ENST00000591709 CCDC7Q96M83 1385 aa24.47■■□□□ 1.51
POLR2E-208ENST00000591709 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
POLR2E-208ENST00000591709 ACSBG1Q96GR2 724 aa24.46■■□□□ 1.51
POLR2E-208ENST00000591709 SHANK3Q9BYB0 1731 aa24.45■■□□□ 1.5
POLR2E-208ENST00000591709 KCNH5Q8NCM2 988 aa24.44■■□□□ 1.5
POLR2E-208ENST00000591709 USP54Q70EL1 1684 aa24.43■■□□□ 1.5
POLR2E-208ENST00000591709 TTC21BQ7Z4L5 1316 aa24.42■■□□□ 1.5
POLR2E-208ENST00000591709 ZNF827Q17R98 1081 aa24.42■■□□□ 1.5
POLR2E-208ENST00000591709 GPR162Q16538 588 aa24.41■■□□□ 1.5
POLR2E-208ENST00000591709 KLHL34Q8N239 644 aa24.41■■□□□ 1.5
POLR2E-208ENST00000591709 GOLGB1Q14789 3259 aaKnown RBP24.39■■□□□ 1.5
POLR2E-208ENST00000591709 GIGYF1O75420 1035 aaPredicted RBP24.39■■□□□ 1.49
POLR2E-208ENST00000591709 DOT1LQ8TEK3 1739 aa24.38■■□□□ 1.49
POLR2E-208ENST00000591709 EVC2Q86UK5 1308 aa24.37■■□□□ 1.49
POLR2E-208ENST00000591709 TTC21AQ8NDW8 1320 aa24.37■■□□□ 1.49
POLR2E-208ENST00000591709 LY75O60449 1722 aa24.37■■□□□ 1.49
POLR2E-208ENST00000591709 IFFO2Q5TF58 517 aa24.36■■□□□ 1.49
POLR2E-208ENST00000591709 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
POLR2E-208ENST00000591709 LRRC4BQ9NT99 713 aa24.35■■□□□ 1.49
POLR2E-208ENST00000591709 FAM208AQ9UK61 1670 aaKnown RBP24.34■■□□□ 1.49
POLR2E-208ENST00000591709 ERBB3P21860 1342 aa24.34■■□□□ 1.49
POLR2E-208ENST00000591709 KTN1Q86UP2 1357 aaKnown RBP24.33■■□□□ 1.49
POLR2E-208ENST00000591709 ZNF692Q9BU19 519 aaPredicted RBP24.33■■□□□ 1.49
POLR2E-208ENST00000591709 NLRP2Q9NX02 1062 aa24.33■■□□□ 1.49
POLR2E-208ENST00000591709 CEP350Q5VT06 3117 aa24.31■■□□□ 1.48
POLR2E-208ENST00000591709 IL2RBP14784 551 aa24.31■■□□□ 1.48
POLR2E-208ENST00000591709 RGPD2P0DJD1 1756 aa24.31■■□□□ 1.48
POLR2E-208ENST00000591709 POLD1P28340 1107 aa24.29■■□□□ 1.48
POLR2E-208ENST00000591709 AKT1S1Q96B36 256 aa24.29■■□□□ 1.48
POLR2E-208ENST00000591709 PNPLA7Q6ZV29 1317 aa24.29■■□□□ 1.48
POLR2E-208ENST00000591709 NLGN2Q8NFZ4 835 aa24.28■■□□□ 1.48
POLR2E-208ENST00000591709 SLC16A10Q8TF71 515 aa24.27■■□□□ 1.48
POLR2E-208ENST00000591709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.26■■□□□ 1.47
POLR2E-208ENST00000591709 ANKRD24Q8TF21 1146 aa24.24■■□□□ 1.47
POLR2E-208ENST00000591709 USP31Q70CQ4 1352 aa24.24■■□□□ 1.47
POLR2E-208ENST00000591709 KCNQ4P56696 695 aa24.23■■□□□ 1.47
POLR2E-208ENST00000591709 SLC27A3Q5K4L6 730 aa24.23■■□□□ 1.47
POLR2E-208ENST00000591709 NME9Q86XW9 330 aa24.22■■□□□ 1.47
POLR2E-208ENST00000591709 TFCP2L1Q9NZI6 479 aa24.22■■□□□ 1.47
POLR2E-208ENST00000591709 C5P01031 1676 aa24.21■■□□□ 1.47
POLR2E-208ENST00000591709 CD163L1Q9NR16 1453 aa24.21■■□□□ 1.47
POLR2E-208ENST00000591709 YBX3P16989 372 aaKnown RBP eCLIP24.21■■□□□ 1.471e-11■■□□□ 12.7
POLR2E-208ENST00000591709 TAF1LQ8IZX4 1826 aa24.21■■□□□ 1.47
POLR2E-208ENST00000591709 ROCK2O75116 1388 aaKnown RBP24.2■■□□□ 1.46
POLR2E-208ENST00000591709 DDX54Q8TDD1 881 aaKnown RBP24.19■■□□□ 1.46
POLR2E-208ENST00000591709 ATP10DQ9P241 1426 aa24.18■■□□□ 1.46
POLR2E-208ENST00000591709 SBNO2Q9Y2G9 1366 aa24.18■■□□□ 1.46
POLR2E-208ENST00000591709 L3MBTL2Q969R5 705 aa24.18■■□□□ 1.46
POLR2E-208ENST00000591709 SYTL4Q96C24 671 aaPredicted RBP24.18■■□□□ 1.46
POLR2E-208ENST00000591709 NSD2O96028 1365 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms