RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 COL14A1Q05707 1796 aaKnown RBP13.62□□□□□ -0.23
BRCA1-226ENST00000591534 ATP7BP35670 1465 aa13.61□□□□□ -0.23
BRCA1-226ENST00000591534 PLEKHG3A1L390 1219 aa13.6□□□□□ -0.23
BRCA1-226ENST00000591534 STK25O00506 426 aa13.6□□□□□ -0.23
BRCA1-226ENST00000591534 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
BRCA1-226ENST00000591534 NBPF8Q3BBV2 869 aa13.6□□□□□ -0.23
BRCA1-226ENST00000591534 FAM196AQ6ZSG2 479 aa13.6□□□□□ -0.23
BRCA1-226ENST00000591534 STRN4Q9NRL3 753 aa13.6□□□□□ -0.23
BRCA1-226ENST00000591534 KIAA0232Q92628 1395 aa13.59□□□□□ -0.23
BRCA1-226ENST00000591534 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
BRCA1-226ENST00000591534 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
BRCA1-226ENST00000591534 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
BRCA1-226ENST00000591534 ACEP12821 1306 aa13.59□□□□□ -0.23
BRCA1-226ENST00000591534 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
BRCA1-226ENST00000591534 ABCA3Q99758 1704 aa13.59□□□□□ -0.23
BRCA1-226ENST00000591534 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
BRCA1-226ENST00000591534 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
BRCA1-226ENST00000591534 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
BRCA1-226ENST00000591534 NLRP13Q86W25 1043 aa13.58□□□□□ -0.24
BRCA1-226ENST00000591534 ALS2Q96Q42 1657 aa13.58□□□□□ -0.24
BRCA1-226ENST00000591534 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-226ENST00000591534 C11orf95C9JLR9 678 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-226ENST00000591534 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-226ENST00000591534 CHRNA2Q15822 529 aa13.57□□□□□ -0.24
BRCA1-226ENST00000591534 ZFP91Q96JP5 570 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-226ENST00000591534 TAOK2Q9UL54 1235 aa13.57□□□□□ -0.24
BRCA1-226ENST00000591534 BRWD3Q6RI45 1802 aa13.57□□□□□ -0.24
BRCA1-226ENST00000591534 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
BRCA1-226ENST00000591534 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
BRCA1-226ENST00000591534 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
BRCA1-226ENST00000591534 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
BRCA1-226ENST00000591534 PSDA5PKW4 1024 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-226ENST00000591534 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
BRCA1-226ENST00000591534 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
BRCA1-226ENST00000591534 CENPJQ9HC77 1338 aaPredicted RBP13.55□□□□□ -0.24
BRCA1-226ENST00000591534 NRAPQ86VF7 1730 aa13.55□□□□□ -0.24
BRCA1-226ENST00000591534 PARD3Q8TEW0 1356 aa13.55□□□□□ -0.24
BRCA1-226ENST00000591534 FAM182BQ5T319 152 aa13.54□□□□□ -0.24
BRCA1-226ENST00000591534 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
BRCA1-226ENST00000591534 CPDO75976 1380 aa13.54□□□□□ -0.24
BRCA1-226ENST00000591534 DISP2A7MBM2 1401 aa13.54□□□□□ -0.24
BRCA1-226ENST00000591534 TRIM37O94972 964 aa13.53□□□□□ -0.24
BRCA1-226ENST00000591534 APBA3O96018 575 aa13.53□□□□□ -0.24
BRCA1-226ENST00000591534 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
BRCA1-226ENST00000591534 GCP02774 474 aa13.52□□□□□ -0.25
BRCA1-226ENST00000591534 R3HDM1Q15032 1099 aaKnown RBP13.52□□□□□ -0.25
BRCA1-226ENST00000591534 NBPF14Q5TI25 921 aa13.52□□□□□ -0.25
BRCA1-226ENST00000591534 BCL11BQ9C0K0 894 aaPredicted RBP13.52□□□□□ -0.25
BRCA1-226ENST00000591534 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
BRCA1-226ENST00000591534 ARHGEF28Q8N1W1 1705 aaKnown RBP13.52□□□□□ -0.25
BRCA1-226ENST00000591534 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
BRCA1-226ENST00000591534 USP19O94966 1318 aa13.51□□□□□ -0.25
BRCA1-226ENST00000591534 EZH2Q15910 746 aaKnown RBP13.51□□□□□ -0.25
BRCA1-226ENST00000591534 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
BRCA1-226ENST00000591534 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
BRCA1-226ENST00000591534 LARP1Q6PKG0 1096 aaKnown RBP13.5□□□□□ -0.25
BRCA1-226ENST00000591534 CAMKK2Q96RR4 588 aa13.5□□□□□ -0.25
BRCA1-226ENST00000591534 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
BRCA1-226ENST00000591534 KIAA1210Q9ULL0 1709 aa13.5□□□□□ -0.25
BRCA1-226ENST00000591534 THSD7AQ9UPZ6 1657 aa13.5□□□□□ -0.25
BRCA1-226ENST00000591534 LRP5O75197 1615 aa13.5□□□□□ -0.25
BRCA1-226ENST00000591534 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
BRCA1-226ENST00000591534 GTPBP6O43824 516 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-226ENST00000591534 NLRP6P59044 892 aa13.49□□□□□ -0.25
BRCA1-226ENST00000591534 SGIP1Q9BQI5 828 aa13.49□□□□□ -0.25
BRCA1-226ENST00000591534 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
BRCA1-226ENST00000591534 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
BRCA1-226ENST00000591534 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
BRCA1-226ENST00000591534 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-226ENST00000591534 CDCA7Q9BWT1 371 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-226ENST00000591534 PCDHB8Q9UN66 801 aa13.47□□□□□ -0.25
BRCA1-226ENST00000591534 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
BRCA1-226ENST00000591534 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.25
BRCA1-226ENST00000591534 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
BRCA1-226ENST00000591534 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
BRCA1-226ENST00000591534 CRB1P82279 1406 aa13.46□□□□□ -0.26
BRCA1-226ENST00000591534 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
BRCA1-226ENST00000591534 TOPAZ1Q8N9V7 1692 aa13.45□□□□□ -0.26
BRCA1-226ENST00000591534 CAMTA1Q9Y6Y1 1673 aa13.45□□□□□ -0.26
BRCA1-226ENST00000591534 TOM1L2Q6ZVM7 507 aa13.45□□□□□ -0.26
BRCA1-226ENST00000591534 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
BRCA1-226ENST00000591534 USP6P35125 1406 aa13.45□□□□□ -0.26
BRCA1-226ENST00000591534 DDB1Q16531 1140 aa13.44□□□□□ -0.26
BRCA1-226ENST00000591534 NRKQ7Z2Y5 1582 aa13.44□□□□□ -0.26
BRCA1-226ENST00000591534 COL5A2P05997 1499 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-226ENST00000591534 OVOS2A0A0G2JMS6 1433 aa13.42□□□□□ -0.26
BRCA1-226ENST00000591534 OVOS2A0A0J9YW53 1432 aa13.42□□□□□ -0.26
BRCA1-226ENST00000591534 OVOS2Q6IE36 1432 aa13.42□□□□□ -0.26
BRCA1-226ENST00000591534 PPP1R1BQ9UD71 204 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-226ENST00000591534 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
BRCA1-226ENST00000591534 TTC21AQ8NDW8 1320 aa13.41□□□□□ -0.26
BRCA1-226ENST00000591534 PLSCR1O15162 318 aa13.41□□□□□ -0.26
BRCA1-226ENST00000591534 CSB-PGBD3P0DP91 1061 aa13.41□□□□□ -0.26
BRCA1-226ENST00000591534 SPON1Q9HCB6 807 aa13.41□□□□□ -0.26
BRCA1-226ENST00000591534 WDR17Q8IZU2 1322 aa13.4□□□□□ -0.26
BRCA1-226ENST00000591534 TNS1Q9HBL0 1735 aaKnown RBP13.4□□□□□ -0.26
BRCA1-226ENST00000591534 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-226ENST00000591534 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
BRCA1-226ENST00000591534 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
BRCA1-226ENST00000591534 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms