RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 COL18A1P39060 1754 aa23.01■■□□□ 1.27
DDX39A-216ENST00000591275 NINLQ9Y2I6 1382 aa23.01■■□□□ 1.27
DDX39A-216ENST00000591275 DCAF8L1A6NGE4 600 aa23■■□□□ 1.27
DDX39A-216ENST00000591275 BCL11BQ9C0K0 894 aaPredicted RBP23■■□□□ 1.27
DDX39A-216ENST00000591275 PDGFDQ9GZP0 370 aaPredicted RBP23■■□□□ 1.27
DDX39A-216ENST00000591275 WNK3Q9BYP7 1800 aa22.99■■□□□ 1.27
DDX39A-216ENST00000591275 MARCH10Q8NA82 808 aaPredicted RBP22.99■■□□□ 1.27
DDX39A-216ENST00000591275 WDR17Q8IZU2 1322 aa22.99■■□□□ 1.27
DDX39A-216ENST00000591275 SOX12O15370 315 aa22.98■■□□□ 1.27
DDX39A-216ENST00000591275 CASZ1Q86V15 1759 aa22.97■■□□□ 1.27
DDX39A-216ENST00000591275 PROM2Q8N271 834 aa22.97■■□□□ 1.27
DDX39A-216ENST00000591275 CPSF1Q10570 1443 aaKnown RBP22.97■■□□□ 1.27
DDX39A-216ENST00000591275 AKAP12Q02952 1782 aa22.96■■□□□ 1.27
DDX39A-216ENST00000591275 RGPD5Q99666 1765 aa22.96■■□□□ 1.27
DDX39A-216ENST00000591275 ZBTB7AO95365 584 aa22.95■■□□□ 1.26
DDX39A-216ENST00000591275 CSB-PGBD3P0DP91 1061 aa22.95■■□□□ 1.26
DDX39A-216ENST00000591275 EVC2Q86UK5 1308 aa22.94■■□□□ 1.26
DDX39A-216ENST00000591275 ARHGEF25Q86VW2 580 aa22.94■■□□□ 1.26
DDX39A-216ENST00000591275 CDCA7Q9BWT1 371 aaPredicted RBP22.93■■□□□ 1.26
DDX39A-216ENST00000591275 TTC21BQ7Z4L5 1316 aa22.92■■□□□ 1.26
DDX39A-216ENST00000591275 CARD10Q9BWT7 1032 aa22.91■■□□□ 1.26
DDX39A-216ENST00000591275 ATF5Q9Y2D1 282 aaPredicted RBP22.91■■□□□ 1.26
DDX39A-216ENST00000591275 BCL9O00512 1426 aa22.91■■□□□ 1.26
DDX39A-216ENST00000591275 MYOM1P52179 1685 aa22.9■■□□□ 1.26
DDX39A-216ENST00000591275 TXNRD1Q16881 649 aa22.9■■□□□ 1.26
DDX39A-216ENST00000591275 KCNH5Q8NCM2 988 aa22.9■■□□□ 1.26
DDX39A-216ENST00000591275 TRPM1Q7Z4N2 1603 aa22.9■■□□□ 1.26
DDX39A-216ENST00000591275 L3MBTL2Q969R5 705 aa22.89■■□□□ 1.25
DDX39A-216ENST00000591275 STK32BQ9NY57 414 aa22.89■■□□□ 1.25
DDX39A-216ENST00000591275 EXOC5O00471 708 aa22.88■■□□□ 1.25
DDX39A-216ENST00000591275 PTGER2P43116 358 aa22.88■■□□□ 1.25
DDX39A-216ENST00000591275 ZNF692Q9BU19 519 aaPredicted RBP22.88■■□□□ 1.25
DDX39A-216ENST00000591275 NFAT5O94916 1531 aa22.86■■□□□ 1.25
DDX39A-216ENST00000591275 TTC21AQ8NDW8 1320 aa22.85■■□□□ 1.25
DDX39A-216ENST00000591275 UTRNP46939 3433 aa22.85■■□□□ 1.25
DDX39A-216ENST00000591275 SLC15A2Q16348 729 aa22.85■■□□□ 1.25
DDX39A-216ENST00000591275 KTN1Q86UP2 1357 aaKnown RBP22.84■■□□□ 1.25
DDX39A-216ENST00000591275 CCDC7Q96M83 1385 aa22.84■■□□□ 1.25
DDX39A-216ENST00000591275 ACSBG1Q96GR2 724 aa22.83■■□□□ 1.25
DDX39A-216ENST00000591275 TNS2Q63HR2 1409 aa22.82■■□□□ 1.24
DDX39A-216ENST00000591275 ROCK2O75116 1388 aaKnown RBP22.82■■□□□ 1.24
DDX39A-216ENST00000591275 FHDC1Q9C0D6 1143 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-216ENST00000591275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.8■■□□□ 1.24
DDX39A-216ENST00000591275 SIN3AQ96ST3 1273 aa22.8■■□□□ 1.24
DDX39A-216ENST00000591275 SYT17Q9BSW7 474 aa22.8■■□□□ 1.24
DDX39A-216ENST00000591275 NHSQ6T4R5 1651 aa22.8■■□□□ 1.24
DDX39A-216ENST00000591275 MTFR1LQ9H019 292 aa22.79■■□□□ 1.24
DDX39A-216ENST00000591275 NLRP2Q9NX02 1062 aa22.79■■□□□ 1.24
DDX39A-216ENST00000591275 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
DDX39A-216ENST00000591275 ABCC6O95255 1503 aa22.77■■□□□ 1.24
DDX39A-216ENST00000591275 MON2Q7Z3U7 1717 aa22.77■■□□□ 1.24
DDX39A-216ENST00000591275 ZNF784Q8NCA9 323 aaPredicted RBP22.77■■□□□ 1.24
DDX39A-216ENST00000591275 NEUROD1Q13562 356 aa22.76■■□□□ 1.23
DDX39A-216ENST00000591275 NME9Q86XW9 330 aa22.76■■□□□ 1.23
DDX39A-216ENST00000591275 SGIP1Q9BQI5 828 aa22.76■■□□□ 1.23
DDX39A-216ENST00000591275 ERBB3P21860 1342 aa22.76■■□□□ 1.23
DDX39A-216ENST00000591275 LTN1O94822 1766 aa22.74■■□□□ 1.23
DDX39A-216ENST00000591275 IL2RBP14784 551 aa22.74■■□□□ 1.23
DDX39A-216ENST00000591275 BTAF1O14981 1849 aa22.73■■□□□ 1.23
DDX39A-216ENST00000591275 PAPPAQ13219 1627 aa22.73■■□□□ 1.23
DDX39A-216ENST00000591275 USP31Q70CQ4 1352 aa22.73■■□□□ 1.23
DDX39A-216ENST00000591275 ARXQ96QS3 562 aa22.72■■□□□ 1.23
DDX39A-216ENST00000591275 ZNF827Q17R98 1081 aa22.71■■□□□ 1.23
DDX39A-216ENST00000591275 ANKRD24Q8TF21 1146 aa22.71■■□□□ 1.23
DDX39A-216ENST00000591275 SBNO2Q9Y2G9 1366 aa22.71■■□□□ 1.23
DDX39A-216ENST00000591275 CD163L1Q9NR16 1453 aa22.71■■□□□ 1.23
DDX39A-216ENST00000591275 CHD4Q14839 1912 aa22.7■■□□□ 1.23
DDX39A-216ENST00000591275 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
DDX39A-216ENST00000591275 USP54Q70EL1 1684 aa22.7■■□□□ 1.22
DDX39A-216ENST00000591275 LRRC4BQ9NT99 713 aa22.69■■□□□ 1.22
DDX39A-216ENST00000591275 HDGFL2Q7Z4V5 671 aaPredicted RBP22.66■■□□□ 1.22
DDX39A-216ENST00000591275 SLC12A5Q9H2X9 1139 aa22.66■■□□□ 1.22
DDX39A-216ENST00000591275 KLHL34Q8N239 644 aa22.65■■□□□ 1.22
DDX39A-216ENST00000591275 DDX54Q8TDD1 881 aaKnown RBP22.64■■□□□ 1.21
DDX39A-216ENST00000591275 LTV1Q96GA3 475 aaPredicted RBP22.64■■□□□ 1.21
DDX39A-216ENST00000591275 MAP3K5Q99683 1374 aa22.63■■□□□ 1.21
DDX39A-216ENST00000591275 GOLGB1Q14789 3259 aaKnown RBP22.63■■□□□ 1.21
DDX39A-216ENST00000591275 CARD11Q9BXL7 1154 aa22.63■■□□□ 1.21
DDX39A-216ENST00000591275 EDC4Q6P2E9 1401 aaKnown RBP22.63■■□□□ 1.21
DDX39A-216ENST00000591275 GPR162Q16538 588 aa22.62■■□□□ 1.21
DDX39A-216ENST00000591275 AKT1S1Q96B36 256 aa22.62■■□□□ 1.21
DDX39A-216ENST00000591275 SENP3-EIF4A1A0A087X0R7 540 aa22.61■■□□□ 1.21
DDX39A-216ENST00000591275 KCNQ4P56696 695 aa22.61■■□□□ 1.21
DDX39A-216ENST00000591275 A0A1W2PP64 1363 aa22.61■■□□□ 1.21
DDX39A-216ENST00000591275 SYTL4Q96C24 671 aaPredicted RBP22.6■■□□□ 1.21
DDX39A-216ENST00000591275 IP6K1Q92551 441 aa22.59■■□□□ 1.21
DDX39A-216ENST00000591275 TERF2IPQ9NYB0 399 aa22.59■■□□□ 1.21
DDX39A-216ENST00000591275 PNPLA7Q6ZV29 1317 aa22.58■■□□□ 1.21
DDX39A-216ENST00000591275 POLD1P28340 1107 aa22.58■■□□□ 1.21
DDX39A-216ENST00000591275 C1QTNF8P60827 252 aa22.58■■□□□ 1.21
DDX39A-216ENST00000591275 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
DDX39A-216ENST00000591275 PELP1Q8IZL8 1130 aaKnown RBP22.58■■□□□ 1.21
DDX39A-216ENST00000591275 SLC16A10Q8TF71 515 aa22.57■■□□□ 1.2
DDX39A-216ENST00000591275 TFCP2L1Q9NZI6 479 aa22.57■■□□□ 1.2
DDX39A-216ENST00000591275 TUBGCP6Q96RT7 1819 aa22.57■■□□□ 1.2
DDX39A-216ENST00000591275 QSER1Q2KHR3 1735 aa22.57■■□□□ 1.2
DDX39A-216ENST00000591275 PRIM1P49642 420 aaKnown RBP22.56■■□□□ 1.2
DDX39A-216ENST00000591275 FAM208AQ9UK61 1670 aaKnown RBP22.55■■□□□ 1.2
DDX39A-216ENST00000591275 DOT1LQ8TEK3 1739 aa22.55■■□□□ 1.2
DDX39A-216ENST00000591275 FBLN1P23142 703 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms