RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 NFAT5O94916 1531 aa25.42■■□□□ 1.66
VAT1-208ENST00000590924 NUP188Q5SRE5 1749 aa25.41■■□□□ 1.66
VAT1-208ENST00000590924 ABCC6O95255 1503 aa25.41■■□□□ 1.66
VAT1-208ENST00000590924 ZBTB7CA1YPR0 619 aa25.4■■□□□ 1.66
VAT1-208ENST00000590924 KCNH5Q8NCM2 988 aa25.4■■□□□ 1.66
VAT1-208ENST00000590924 LTN1O94822 1766 aa25.4■■□□□ 1.66
VAT1-208ENST00000590924 PARD3Q8TEW0 1356 aa25.4■■□□□ 1.66
VAT1-208ENST00000590924 ARHGEF25Q86VW2 580 aa25.38■■□□□ 1.65
VAT1-208ENST00000590924 CD163L1Q9NR16 1453 aa25.38■■□□□ 1.65
VAT1-208ENST00000590924 RGPD3A6NKT7 1758 aaPredicted RBP25.38■■□□□ 1.65
VAT1-208ENST00000590924 RGPD4Q7Z3J3 1758 aa25.38■■□□□ 1.65
VAT1-208ENST00000590924 PSDA5PKW4 1024 aaPredicted RBP25.37■■□□□ 1.65
VAT1-208ENST00000590924 EZH2Q15910 746 aaKnown RBP25.37■■□□□ 1.65
VAT1-208ENST00000590924 CAMKK2Q96RR4 588 aa25.37■■□□□ 1.65
VAT1-208ENST00000590924 WDR17Q8IZU2 1322 aa25.36■■□□□ 1.65
VAT1-208ENST00000590924 AXIN2Q9Y2T1 843 aa25.35■■□□□ 1.65
VAT1-208ENST00000590924 C11orf95C9JLR9 678 aaPredicted RBP25.34■■□□□ 1.65
VAT1-208ENST00000590924 APBA3O96018 575 aa25.34■■□□□ 1.65
VAT1-208ENST00000590924 TOM1L2Q6ZVM7 507 aa25.34■■□□□ 1.65
VAT1-208ENST00000590924 OVOS2A0A0G2JMS6 1433 aa25.34■■□□□ 1.65
VAT1-208ENST00000590924 OVOS2A0A0J9YW53 1432 aa25.34■■□□□ 1.65
VAT1-208ENST00000590924 OVOS2Q6IE36 1432 aa25.34■■□□□ 1.65
VAT1-208ENST00000590924 USP31Q70CQ4 1352 aa25.33■■□□□ 1.65
VAT1-208ENST00000590924 SOX12O15370 315 aa25.3■■□□□ 1.64
VAT1-208ENST00000590924 R3HDM1Q15032 1099 aaKnown RBP25.3■■□□□ 1.64
VAT1-208ENST00000590924 EDC4Q6P2E9 1401 aaKnown RBP25.29■■□□□ 1.64
VAT1-208ENST00000590924 DDB1Q16531 1140 aa25.29■■□□□ 1.64
VAT1-208ENST00000590924 PUS7Q96PZ0 661 aaKnown RBP25.29■■□□□ 1.64
VAT1-208ENST00000590924 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.28■■□□□ 1.64
VAT1-208ENST00000590924 CDCA7Q9BWT1 371 aaPredicted RBP25.28■■□□□ 1.64
VAT1-208ENST00000590924 HDGFL2Q7Z4V5 671 aaPredicted RBP25.27■■□□□ 1.64
VAT1-208ENST00000590924 TMC1Q8TDI8 760 aa25.27■■□□□ 1.64
VAT1-208ENST00000590924 CARD10Q9BWT7 1032 aa25.27■■□□□ 1.64
VAT1-208ENST00000590924 SLC12A5Q9H2X9 1139 aa25.25■■□□□ 1.63
VAT1-208ENST00000590924 A0A1W2PP64 1363 aa25.25■■□□□ 1.63
VAT1-208ENST00000590924 CCDC7Q96M83 1385 aa25.25■■□□□ 1.63
VAT1-208ENST00000590924 BCL9O00512 1426 aa25.25■■□□□ 1.63
VAT1-208ENST00000590924 NINLQ9Y2I6 1382 aa25.24■■□□□ 1.63
VAT1-208ENST00000590924 CSB-PGBD3P0DP91 1061 aa25.24■■□□□ 1.63
VAT1-208ENST00000590924 NME9Q86XW9 330 aa25.24■■□□□ 1.63
VAT1-208ENST00000590924 TERF2IPQ9NYB0 399 aa25.23■■□□□ 1.63
VAT1-208ENST00000590924 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
VAT1-208ENST00000590924 TESK2Q96S53 571 aa25.22■■□□□ 1.63
VAT1-208ENST00000590924 TNS2Q63HR2 1409 aa25.2■■□□□ 1.63
VAT1-208ENST00000590924 KAT6BQ8WYB5 2073 aa25.2■■□□□ 1.62
VAT1-208ENST00000590924 ERBB3P21860 1342 aa25.19■■□□□ 1.62
VAT1-208ENST00000590924 ST20-MTHFSA0A0A6YYL1 179 aa25.19■■□□□ 1.62
VAT1-208ENST00000590924 SLC24A1O60721 1099 aa25.19■■□□□ 1.62
VAT1-208ENST00000590924 MARCH10Q8NA82 808 aaPredicted RBP25.19■■□□□ 1.62
VAT1-208ENST00000590924 PLSCR1O15162 318 aa25.18■■□□□ 1.62
VAT1-208ENST00000590924 NBPF14Q5TI25 921 aa25.18■■□□□ 1.62
VAT1-208ENST00000590924 NHSQ6T4R5 1651 aa25.17■■□□□ 1.62
VAT1-208ENST00000590924 BCL11BQ9C0K0 894 aaPredicted RBP25.17■■□□□ 1.62
VAT1-208ENST00000590924 EXOC5O00471 708 aa25.15■■□□□ 1.62
VAT1-208ENST00000590924 CASZ1Q86V15 1759 aa25.13■■□□□ 1.61
VAT1-208ENST00000590924 PTF1AQ7RTS3 328 aa25.12■■□□□ 1.61
VAT1-208ENST00000590924 RGPD2P0DJD1 1756 aa25.12■■□□□ 1.61
VAT1-208ENST00000590924 KIF20BQ96Q89 1820 aa25.11■■□□□ 1.61
VAT1-208ENST00000590924 BTAF1O14981 1849 aa25.1■■□□□ 1.61
VAT1-208ENST00000590924 ANKRD36BQ8N2N9 1353 aa25.1■■□□□ 1.61
VAT1-208ENST00000590924 USP47Q96K76 1375 aa25.1■■□□□ 1.61
VAT1-208ENST00000590924 ANKRD24Q8TF21 1146 aa25.1■■□□□ 1.61
VAT1-208ENST00000590924 NLRP2Q9NX02 1062 aa25.1■■□□□ 1.61
VAT1-208ENST00000590924 IL2RBP14784 551 aa25.07■■□□□ 1.6
VAT1-208ENST00000590924 IP6K1Q92551 441 aa25.07■■□□□ 1.6
VAT1-208ENST00000590924 ZEB1P37275 1124 aaPredicted RBP25.06■■□□□ 1.6
VAT1-208ENST00000590924 COG3Q96JB2 828 aa25.06■■□□□ 1.6
VAT1-208ENST00000590924 MYOM1P52179 1685 aa25.06■■□□□ 1.6
VAT1-208ENST00000590924 TMF1P82094 1093 aa25.05■■□□□ 1.6
VAT1-208ENST00000590924 SHANK3Q9BYB0 1731 aa25.04■■□□□ 1.6
VAT1-208ENST00000590924 PROM2Q8N271 834 aa25.04■■□□□ 1.6
VAT1-208ENST00000590924 ANO8Q9HCE9 1232 aaPredicted RBP25.04■■□□□ 1.6
VAT1-208ENST00000590924 MAP3K19Q56UN5 1328 aa25.02■■□□□ 1.6
VAT1-208ENST00000590924 SPON1Q9HCB6 807 aa25.01■■□□□ 1.59
VAT1-208ENST00000590924 KCNQ2O43526 872 aa25■■□□□ 1.59
VAT1-208ENST00000590924 TXNRD1Q16881 649 aa25■■□□□ 1.59
VAT1-208ENST00000590924 PAPPAQ13219 1627 aa25■■□□□ 1.59
VAT1-208ENST00000590924 RTL1A6NKG5 1358 aa24.99■■□□□ 1.59
VAT1-208ENST00000590924 HOXC9P31274 260 aa24.99■■□□□ 1.59
VAT1-208ENST00000590924 DOT1LQ8TEK3 1739 aa24.98■■□□□ 1.59
VAT1-208ENST00000590924 CDCA8Q53HL2 280 aa24.97■■□□□ 1.59
VAT1-208ENST00000590924 FYB1O15117 783 aa24.96■■□□□ 1.59
VAT1-208ENST00000590924 AMPHP49418 695 aa24.96■■□□□ 1.59
VAT1-208ENST00000590924 LTV1Q96GA3 475 aaPredicted RBP24.96■■□□□ 1.59
VAT1-208ENST00000590924 ACSBG1Q96GR2 724 aa24.96■■□□□ 1.59
VAT1-208ENST00000590924 FBLN1P23142 703 aa24.95■■□□□ 1.58
VAT1-208ENST00000590924 EIF4G2P78344 907 aaKnown RBP eCLIP24.94■■□□□ 1.58
VAT1-208ENST00000590924 QSER1Q2KHR3 1735 aa24.94■■□□□ 1.58
VAT1-208ENST00000590924 GGNBP2Q9H3C7 697 aa24.93■■□□□ 1.58
VAT1-208ENST00000590924 STK32BQ9NY57 414 aa24.93■■□□□ 1.58
VAT1-208ENST00000590924 PPP1R1BQ9UD71 204 aaPredicted RBP24.92■■□□□ 1.58
VAT1-208ENST00000590924 LY75O60449 1722 aa24.92■■□□□ 1.58
VAT1-208ENST00000590924 ANKRD26Q9UPS8 1709 aa24.92■■□□□ 1.58
VAT1-208ENST00000590924 SLC15A2Q16348 729 aa24.91■■□□□ 1.58
VAT1-208ENST00000590924 PDGFDQ9GZP0 370 aaPredicted RBP24.91■■□□□ 1.58
VAT1-208ENST00000590924 MEGF6O75095 1541 aa24.91■■□□□ 1.58
VAT1-208ENST00000590924 RRS1Q15050 365 aaKnown RBP24.9■■□□□ 1.58
VAT1-208ENST00000590924 MAP2P11137 1827 aaKnown RBP24.9■■□□□ 1.58
VAT1-208ENST00000590924 SMG6Q86US8 1419 aaKnown RBP24.88■■□□□ 1.57
VAT1-208ENST00000590924 DDX54Q8TDD1 881 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms