RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 MYT1Q01538 1121 aa31.12■■■□□ 2.57
MBD3-208ENST00000590830 KRT27Q7Z3Y8 459 aa31.12■■■□□ 2.57
MBD3-208ENST00000590830 FYB1O15117 783 aa31.1■■■□□ 2.57
MBD3-208ENST00000590830 EP400Q96L91 3159 aa31.09■■■□□ 2.57
MBD3-208ENST00000590830 C11orf95C9JLR9 678 aaPredicted RBP31.09■■■□□ 2.57
MBD3-208ENST00000590830 BARGINQ6ZT62 677 aa31.09■■■□□ 2.57
MBD3-208ENST00000590830 TCP11L2Q8N4U5 519 aa31.08■■■□□ 2.57
MBD3-208ENST00000590830 POLR3GLQ9BT43 218 aa31.07■■■□□ 2.56
MBD3-208ENST00000590830 MYOM1P52179 1685 aa31.06■■■□□ 2.56
MBD3-208ENST00000590830 THSD7AQ9UPZ6 1657 aa31.06■■■□□ 2.56
MBD3-208ENST00000590830 FBLN1P23142 703 aa31.06■■■□□ 2.56
MBD3-208ENST00000590830 COG3Q96JB2 828 aa31.06■■■□□ 2.56
MBD3-208ENST00000590830 CRB1P82279 1406 aa31.06■■■□□ 2.56
MBD3-208ENST00000590830 GGNBP2Q9H3C7 697 aa31.05■■■□□ 2.56
MBD3-208ENST00000590830 WDR17Q8IZU2 1322 aa31.04■■■□□ 2.56
MBD3-208ENST00000590830 FAM182BQ5T319 152 aa31.03■■■□□ 2.56
MBD3-208ENST00000590830 TOM1L2Q6ZVM7 507 aa31.03■■■□□ 2.56
MBD3-208ENST00000590830 THRAP3Q9Y2W1 955 aaKnown RBP31.03■■■□□ 2.56
MBD3-208ENST00000590830 RGPD5Q99666 1765 aa31■■■□□ 2.55
MBD3-208ENST00000590830 NSD3Q9BZ95 1437 aa30.99■■■□□ 2.55
MBD3-208ENST00000590830 CSB-PGBD3P0DP91 1061 aa30.98■■■□□ 2.55
MBD3-208ENST00000590830 CCDC125Q86Z20 511 aa30.98■■■□□ 2.55
MBD3-208ENST00000590830 ABCC6O95255 1503 aa30.98■■■□□ 2.55
MBD3-208ENST00000590830 CARD10Q9BWT7 1032 aa30.97■■■□□ 2.55
MBD3-208ENST00000590830 IP6K1Q92551 441 aa30.96■■■□□ 2.55
MBD3-208ENST00000590830 MAP3K19Q56UN5 1328 aa30.96■■■□□ 2.55
MBD3-208ENST00000590830 ERBB3P21860 1342 aa30.94■■■□□ 2.54
MBD3-208ENST00000590830 BLMP54132 1417 aaPredicted RBP30.93■■■□□ 2.54
MBD3-208ENST00000590830 LTN1O94822 1766 aa30.93■■■□□ 2.54
MBD3-208ENST00000590830 ANKRD24Q8TF21 1146 aa30.93■■■□□ 2.54
MBD3-208ENST00000590830 PANK3Q9H999 370 aa30.93■■■□□ 2.54
MBD3-208ENST00000590830 RRS1Q15050 365 aaKnown RBP30.91■■■□□ 2.54
MBD3-208ENST00000590830 PDE3BQ13370 1112 aa30.9■■■□□ 2.54
MBD3-208ENST00000590830 HOXC9P31274 260 aa30.89■■■□□ 2.54
MBD3-208ENST00000590830 NLRP2Q9NX02 1062 aa30.88■■■□□ 2.53
MBD3-208ENST00000590830 KIF7Q2M1P5 1343 aa30.88■■■□□ 2.53
MBD3-208ENST00000590830 AMPHP49418 695 aa30.87■■■□□ 2.53
MBD3-208ENST00000590830 DEFB132Q7Z7B7 95 aa30.87■■■□□ 2.53
MBD3-208ENST00000590830 LTV1Q96GA3 475 aaPredicted RBP30.86■■■□□ 2.53
MBD3-208ENST00000590830 CGNL1Q0VF96 1302 aa30.86■■■□□ 2.53
MBD3-208ENST00000590830 DISP2A7MBM2 1401 aa30.86■■■□□ 2.53
MBD3-208ENST00000590830 KIF20BQ96Q89 1820 aa30.85■■■□□ 2.53
MBD3-208ENST00000590830 CCDC7Q96M83 1385 aa30.85■■■□□ 2.53
MBD3-208ENST00000590830 FAM196AQ6ZSG2 479 aa30.85■■■□□ 2.53
MBD3-208ENST00000590830 PARP4Q9UKK3 1724 aaKnown RBP30.84■■■□□ 2.53
MBD3-208ENST00000590830 CDCA7Q9BWT1 371 aaPredicted RBP30.84■■■□□ 2.53
MBD3-208ENST00000590830 DDB1Q16531 1140 aa30.83■■■□□ 2.53
MBD3-208ENST00000590830 SF3B2Q13435 895 aaKnown RBP30.81■■■□□ 2.52
MBD3-208ENST00000590830 TRIM37O94972 964 aa30.79■■■□□ 2.52
MBD3-208ENST00000590830 MARCH10Q8NA82 808 aaPredicted RBP30.79■■■□□ 2.52
MBD3-208ENST00000590830 RTL1A6NKG5 1358 aa30.79■■■□□ 2.52
MBD3-208ENST00000590830 LRRC37A3O60309 1634 aa30.78■■■□□ 2.52
MBD3-208ENST00000590830 HSP90AB2PQ58FF8 381 aa30.78■■■□□ 2.52
MBD3-208ENST00000590830 EMILIN1Q9Y6C2 1016 aa30.78■■■□□ 2.52
MBD3-208ENST00000590830 EXOC5O00471 708 aa30.76■■■□□ 2.51
MBD3-208ENST00000590830 WNK3Q9BYP7 1800 aa30.75■■■□□ 2.51
MBD3-208ENST00000590830 PEAK1Q9H792 1746 aa30.74■■■□□ 2.51
MBD3-208ENST00000590830 IL2RBP14784 551 aa30.74■■■□□ 2.51
MBD3-208ENST00000590830 INSRP06213 1382 aa30.73■■■□□ 2.51
MBD3-208ENST00000590830 WASHC2AQ641Q2 1341 aa30.73■■■□□ 2.51
MBD3-208ENST00000590830 KIF24Q5T7B8 1368 aa30.72■■■□□ 2.51
MBD3-208ENST00000590830 BAG6P46379 1132 aa30.72■■■□□ 2.51
MBD3-208ENST00000590830 EN1Q05925 392 aaPredicted RBP30.72■■■□□ 2.51
MBD3-208ENST00000590830 NBPF6Q5VWK0 638 aa30.72■■■□□ 2.51
MBD3-208ENST00000590830 NBPF4Q96M43 638 aa30.72■■■□□ 2.51
MBD3-208ENST00000590830 POLKQ9UBT6 870 aa30.72■■■□□ 2.51
MBD3-208ENST00000590830 FLT4P35916 1363 aa30.71■■■□□ 2.51
MBD3-208ENST00000590830 TNNT2P45379 298 aaPredicted RBP30.71■■■□□ 2.51
MBD3-208ENST00000590830 OVOS2A0A0G2JMS6 1433 aa30.7■■■□□ 2.5
MBD3-208ENST00000590830 KNSTRNQ9Y448 316 aa30.69■■■□□ 2.5
MBD3-208ENST00000590830 RGPD1P0DJD0 1748 aa30.68■■■□□ 2.5
MBD3-208ENST00000590830 PPM1GO15355 546 aaPredicted RBP30.68■■■□□ 2.5
MBD3-208ENST00000590830 PER1O15534 1290 aaPredicted RBP30.68■■■□□ 2.5
MBD3-208ENST00000590830 TNS2Q63HR2 1409 aa30.67■■■□□ 2.5
MBD3-208ENST00000590830 APBA3O96018 575 aa30.67■■■□□ 2.5
MBD3-208ENST00000590830 AMER1Q5JTC6 1135 aaPredicted RBP30.67■■■□□ 2.5
MBD3-208ENST00000590830 PTF1AQ7RTS3 328 aa30.67■■■□□ 2.5
MBD3-208ENST00000590830 TNS1Q9HBL0 1735 aaKnown RBP30.67■■■□□ 2.5
MBD3-208ENST00000590830 USHBP1Q8N6Y0 703 aa30.66■■■□□ 2.5
MBD3-208ENST00000590830 NSD2O96028 1365 aa30.66■■■□□ 2.5
MBD3-208ENST00000590830 CAMKK2Q96RR4 588 aa30.65■■■□□ 2.5
MBD3-208ENST00000590830 BCL9O00512 1426 aa30.64■■■□□ 2.5
MBD3-208ENST00000590830 RGPD2P0DJD1 1756 aa30.64■■■□□ 2.5
MBD3-208ENST00000590830 EZH2Q15910 746 aaKnown RBP30.64■■■□□ 2.5
MBD3-208ENST00000590830 FAM208AQ9UK61 1670 aaKnown RBP30.64■■■□□ 2.5
MBD3-208ENST00000590830 MORC1Q86VD1 984 aa30.63■■■□□ 2.49
MBD3-208ENST00000590830 ANKRD26Q9UPS8 1709 aa30.62■■■□□ 2.49
MBD3-208ENST00000590830 SMG6Q86US8 1419 aaKnown RBP30.61■■■□□ 2.49
MBD3-208ENST00000590830 BCL11BQ9C0K0 894 aaPredicted RBP30.6■■■□□ 2.49
MBD3-208ENST00000590830 MAP2P11137 1827 aaKnown RBP30.59■■■□□ 2.49
MBD3-208ENST00000590830 MEGF6O75095 1541 aa30.59■■■□□ 2.49
MBD3-208ENST00000590830 KCNQ2O43526 872 aa30.57■■■□□ 2.48
MBD3-208ENST00000590830 DDX54Q8TDD1 881 aaKnown RBP30.57■■■□□ 2.48
MBD3-208ENST00000590830 SBF2Q86WG5 1849 aa30.56■■■□□ 2.48
MBD3-208ENST00000590830 ZCRB1Q8TBF4 217 aaKnown RBP30.55■■■□□ 2.48
MBD3-208ENST00000590830 EIF4A2Q14240 407 aaKnown RBP30.54■■■□□ 2.48
MBD3-208ENST00000590830 ACSBG1Q96GR2 724 aa30.54■■■□□ 2.48
MBD3-208ENST00000590830 EYA1Q99502 592 aa30.54■■■□□ 2.48
MBD3-208ENST00000590830 RAPGEF4Q8WZA2 1011 aa30.52■■■□□ 2.48
MBD3-208ENST00000590830 NCAPD2Q15021 1401 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms