RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 DDB1Q16531 1140 aa13.21□□□□□ -0.29
AP3D1-208ENST00000590683 MARCH10Q8NA82 808 aaPredicted RBP13.21□□□□□ -0.29
AP3D1-208ENST00000590683 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
AP3D1-208ENST00000590683 TUBGCP6Q96RT7 1819 aa13.2□□□□□ -0.3
AP3D1-208ENST00000590683 PCNTO95613 3336 aa13.2□□□□□ -0.3
AP3D1-208ENST00000590683 QSER1Q2KHR3 1735 aa13.2□□□□□ -0.3
AP3D1-208ENST00000590683 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
AP3D1-208ENST00000590683 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
AP3D1-208ENST00000590683 TULP4Q9NRJ4 1543 aa13.19□□□□□ -0.3
AP3D1-208ENST00000590683 KIF3CO14782 793 aa13.19□□□□□ -0.3
AP3D1-208ENST00000590683 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
AP3D1-208ENST00000590683 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
AP3D1-208ENST00000590683 CRB1P82279 1406 aa13.19□□□□□ -0.3
AP3D1-208ENST00000590683 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
AP3D1-208ENST00000590683 ITSN1Q15811 1721 aa13.18□□□□□ -0.3
AP3D1-208ENST00000590683 BCL9O00512 1426 aa13.17□□□□□ -0.3
AP3D1-208ENST00000590683 POLD1P28340 1107 aa13.17□□□□□ -0.3
AP3D1-208ENST00000590683 NHSQ6T4R5 1651 aa13.17□□□□□ -0.3
AP3D1-208ENST00000590683 POGKQ9P215 609 aa13.16□□□□□ -0.3
AP3D1-208ENST00000590683 CPDO75976 1380 aa13.16□□□□□ -0.3
AP3D1-208ENST00000590683 ANKRD30BQ9BXX2 1392 aa13.16□□□□□ -0.3
AP3D1-208ENST00000590683 BTAF1O14981 1849 aa13.16□□□□□ -0.3
AP3D1-208ENST00000590683 ARHGEF28Q8N1W1 1705 aaKnown RBP13.15□□□□□ -0.3
AP3D1-208ENST00000590683 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
AP3D1-208ENST00000590683 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
AP3D1-208ENST00000590683 HTRA3P83110 453 aa13.14□□□□□ -0.31
AP3D1-208ENST00000590683 KAT6BQ8WYB5 2073 aa13.14□□□□□ -0.31
AP3D1-208ENST00000590683 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
AP3D1-208ENST00000590683 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
AP3D1-208ENST00000590683 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
AP3D1-208ENST00000590683 EIF3AQ14152 1382 aaKnown RBP13.12□□□□□ -0.31
AP3D1-208ENST00000590683 JMYQ8N9B5 988 aa13.12□□□□□ -0.31
AP3D1-208ENST00000590683 SLC16A10Q8TF71 515 aa13.12□□□□□ -0.31
AP3D1-208ENST00000590683 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
AP3D1-208ENST00000590683 LRRC4BQ9NT99 713 aa13.12□□□□□ -0.31
AP3D1-208ENST00000590683 PNPLA7Q6ZV29 1317 aa13.12□□□□□ -0.31
AP3D1-208ENST00000590683 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
AP3D1-208ENST00000590683 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
AP3D1-208ENST00000590683 COL18A1P39060 1754 aa13.1□□□□□ -0.31
AP3D1-208ENST00000590683 WASLO00401 505 aaPredicted RBP13.1□□□□□ -0.31
AP3D1-208ENST00000590683 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
AP3D1-208ENST00000590683 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
AP3D1-208ENST00000590683 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
AP3D1-208ENST00000590683 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
AP3D1-208ENST00000590683 USP19O94966 1318 aa13.1□□□□□ -0.31
AP3D1-208ENST00000590683 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
AP3D1-208ENST00000590683 GCP02774 474 aa13.08□□□□□ -0.32
AP3D1-208ENST00000590683 TOMM70O94826 608 aa13.07□□□□□ -0.32
AP3D1-208ENST00000590683 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
AP3D1-208ENST00000590683 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
AP3D1-208ENST00000590683 TRAK1Q9UPV9 953 aa13.06□□□□□ -0.32
AP3D1-208ENST00000590683 BRD4O60885 1362 aaPredicted RBP13.06□□□□□ -0.32
AP3D1-208ENST00000590683 ACEP12821 1306 aa13.05□□□□□ -0.32
AP3D1-208ENST00000590683 ADGRB1O14514 1584 aa13.04□□□□□ -0.32
AP3D1-208ENST00000590683 EXOC5O00471 708 aa13.04□□□□□ -0.32
AP3D1-208ENST00000590683 CDCA7Q9BWT1 371 aaPredicted RBP13.04□□□□□ -0.32
AP3D1-208ENST00000590683 WDR17Q8IZU2 1322 aa13.04□□□□□ -0.32
AP3D1-208ENST00000590683 POLR3AO14802 1390 aaPredicted RBP13.04□□□□□ -0.32
AP3D1-208ENST00000590683 USP6P35125 1406 aa13.04□□□□□ -0.32
AP3D1-208ENST00000590683 KCNQ4P56696 695 aa13.03□□□□□ -0.32
AP3D1-208ENST00000590683 TFCP2L1Q9NZI6 479 aa13.03□□□□□ -0.32
AP3D1-208ENST00000590683 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
AP3D1-208ENST00000590683 TNS2Q63HR2 1409 aa13.03□□□□□ -0.32
AP3D1-208ENST00000590683 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.32
AP3D1-208ENST00000590683 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
AP3D1-208ENST00000590683 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
AP3D1-208ENST00000590683 NMRK2Q9NPI5 230 aa13.01□□□□□ -0.33
AP3D1-208ENST00000590683 ABCC6O95255 1503 aa13.01□□□□□ -0.33
AP3D1-208ENST00000590683 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
AP3D1-208ENST00000590683 HSPA1AP0DMV8 641 aaKnown RBP13□□□□□ -0.33
AP3D1-208ENST00000590683 HSPA1BP0DMV9 641 aaKnown RBP13□□□□□ -0.33
AP3D1-208ENST00000590683 LY75O60449 1722 aa12.99□□□□□ -0.33
AP3D1-208ENST00000590683 SLIT3O75094 1523 aa12.99□□□□□ -0.33
AP3D1-208ENST00000590683 MSH5O43196 834 aa12.99□□□□□ -0.33
AP3D1-208ENST00000590683 CD2APQ9Y5K6 639 aa12.99□□□□□ -0.33
AP3D1-208ENST00000590683 CARD10Q9BWT7 1032 aa12.98□□□□□ -0.33
AP3D1-208ENST00000590683 CICQ96RK0 1608 aaPredicted RBP12.98□□□□□ -0.33
AP3D1-208ENST00000590683 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
AP3D1-208ENST00000590683 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
AP3D1-208ENST00000590683 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
AP3D1-208ENST00000590683 RBM46Q8TBY0 533 aaKnown RBP12.97□□□□□ -0.33
AP3D1-208ENST00000590683 CSB-PGBD3P0DP91 1061 aa12.96□□□□□ -0.33
AP3D1-208ENST00000590683 CDK19Q9BWU1 502 aa12.96□□□□□ -0.33
AP3D1-208ENST00000590683 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.34
AP3D1-208ENST00000590683 PLEKHG3A1L390 1219 aa12.95□□□□□ -0.34
AP3D1-208ENST00000590683 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
AP3D1-208ENST00000590683 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
AP3D1-208ENST00000590683 NLRP6P59044 892 aa12.93□□□□□ -0.34
AP3D1-208ENST00000590683 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
AP3D1-208ENST00000590683 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
AP3D1-208ENST00000590683 FSTL1Q12841 308 aa12.92□□□□□ -0.34
AP3D1-208ENST00000590683 C16orf71Q8IYS4 520 aaPredicted RBP12.92□□□□□ -0.34
AP3D1-208ENST00000590683 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
AP3D1-208ENST00000590683 KCNA4P22459 653 aa12.91□□□□□ -0.34
AP3D1-208ENST00000590683 USP54Q70EL1 1684 aa12.91□□□□□ -0.34
AP3D1-208ENST00000590683 C5P01031 1676 aa12.9□□□□□ -0.34
AP3D1-208ENST00000590683 QRICH2Q9H0J4 1663 aa12.9□□□□□ -0.34
AP3D1-208ENST00000590683 N4BP2Q86UW6 1770 aaPredicted RBP12.9□□□□□ -0.34
AP3D1-208ENST00000590683 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
AP3D1-208ENST00000590683 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms