RNA–Protein interactions for RNA: ENST00000590472.5

GCDH-211, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-211ENST00000590472 OVOS2Q6IE36 1432 aa22.38■■□□□ 1.17
GCDH-211ENST00000590472 CDCA8Q53HL2 280 aa22.37■■□□□ 1.17
GCDH-211ENST00000590472 CRB1P82279 1406 aa22.37■■□□□ 1.17
GCDH-211ENST00000590472 BARGINQ6ZT62 677 aa22.36■■□□□ 1.17
GCDH-211ENST00000590472 ABCC6O95255 1503 aa22.35■■□□□ 1.17
GCDH-211ENST00000590472 LTN1O94822 1766 aa22.35■■□□□ 1.17
GCDH-211ENST00000590472 CCDC125Q86Z20 511 aa22.34■■□□□ 1.17
GCDH-211ENST00000590472 TCP11L2Q8N4U5 519 aa22.34■■□□□ 1.17
GCDH-211ENST00000590472 BLMP54132 1417 aaPredicted RBP22.33■■□□□ 1.17
GCDH-211ENST00000590472 THRAP3Q9Y2W1 955 aaKnown RBP22.33■■□□□ 1.17
GCDH-211ENST00000590472 EP400Q96L91 3159 aa22.33■■□□□ 1.16
GCDH-211ENST00000590472 HSPA5P11021 654 aaKnown RBP22.32■■□□□ 1.16
GCDH-211ENST00000590472 EIF4G2P78344 907 aaKnown RBP eCLIP22.32■■□□□ 1.16
GCDH-211ENST00000590472 WDR17Q8IZU2 1322 aa22.31■■□□□ 1.16
GCDH-211ENST00000590472 FAM182BQ5T319 152 aa22.31■■□□□ 1.16
GCDH-211ENST00000590472 PARP4Q9UKK3 1724 aaKnown RBP22.31■■□□□ 1.16
GCDH-211ENST00000590472 TOM1L2Q6ZVM7 507 aa22.29■■□□□ 1.16
GCDH-211ENST00000590472 WNK3Q9BYP7 1800 aa22.29■■□□□ 1.16
GCDH-211ENST00000590472 FYB1O15117 783 aa22.27■■□□□ 1.16
GCDH-211ENST00000590472 COG3Q96JB2 828 aa22.27■■□□□ 1.16
GCDH-211ENST00000590472 CARD14Q9BXL6 1004 aa22.27■■□□□ 1.16
GCDH-211ENST00000590472 KIF20BQ96Q89 1820 aa22.27■■□□□ 1.15
GCDH-211ENST00000590472 LRRC37A3O60309 1634 aa22.25■■□□□ 1.15
GCDH-211ENST00000590472 RGPD1P0DJD0 1748 aa22.24■■□□□ 1.15
GCDH-211ENST00000590472 CSB-PGBD3P0DP91 1061 aa22.24■■□□□ 1.15
GCDH-211ENST00000590472 CARD10Q9BWT7 1032 aa22.24■■□□□ 1.15
GCDH-211ENST00000590472 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
GCDH-211ENST00000590472 ERBB3P21860 1342 aa22.24■■□□□ 1.15
GCDH-211ENST00000590472 FBLN1P23142 703 aa22.23■■□□□ 1.15
GCDH-211ENST00000590472 PDE3BQ13370 1112 aa22.23■■□□□ 1.15
GCDH-211ENST00000590472 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
GCDH-211ENST00000590472 DEFB132Q7Z7B7 95 aa22.22■■□□□ 1.15
GCDH-211ENST00000590472 TNS1Q9HBL0 1735 aaKnown RBP22.22■■□□□ 1.15
GCDH-211ENST00000590472 DISP2A7MBM2 1401 aa22.22■■□□□ 1.15
GCDH-211ENST00000590472 SF3B2Q13435 895 aaKnown RBP22.21■■□□□ 1.15
GCDH-211ENST00000590472 FAM196AQ6ZSG2 479 aa22.21■■□□□ 1.15
GCDH-211ENST00000590472 MAP3K19Q56UN5 1328 aa22.21■■□□□ 1.15
GCDH-211ENST00000590472 ANKRD24Q8TF21 1146 aa22.2■■□□□ 1.14
GCDH-211ENST00000590472 IP6K1Q92551 441 aa22.2■■□□□ 1.14
GCDH-211ENST00000590472 POLR3GLQ9BT43 218 aa22.2■■□□□ 1.14
GCDH-211ENST00000590472 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
GCDH-211ENST00000590472 C11orf95C9JLR9 678 aaPredicted RBP22.19■■□□□ 1.14
GCDH-211ENST00000590472 PEAK1Q9H792 1746 aa22.19■■□□□ 1.14
GCDH-211ENST00000590472 DDB1Q16531 1140 aa22.17■■□□□ 1.14
GCDH-211ENST00000590472 CDCA7Q9BWT1 371 aaPredicted RBP22.17■■□□□ 1.14
GCDH-211ENST00000590472 FAM208AQ9UK61 1670 aaKnown RBP22.17■■□□□ 1.14
GCDH-211ENST00000590472 HOXC9P31274 260 aa22.16■■□□□ 1.14
GCDH-211ENST00000590472 NLRP2Q9NX02 1062 aa22.16■■□□□ 1.14
GCDH-211ENST00000590472 TRIM37O94972 964 aa22.15■■□□□ 1.14
GCDH-211ENST00000590472 RRS1Q15050 365 aaKnown RBP22.15■■□□□ 1.14
GCDH-211ENST00000590472 RTL1A6NKG5 1358 aa22.14■■□□□ 1.14
GCDH-211ENST00000590472 BAG6P46379 1132 aa22.14■■□□□ 1.13
GCDH-211ENST00000590472 AMPHP49418 695 aa22.14■■□□□ 1.13
GCDH-211ENST00000590472 OVOS2A0A0G2JMS6 1433 aa22.14■■□□□ 1.13
GCDH-211ENST00000590472 CGNL1Q0VF96 1302 aa22.12■■□□□ 1.13
GCDH-211ENST00000590472 SBF2Q86WG5 1849 aa22.12■■□□□ 1.13
GCDH-211ENST00000590472 RGPD2P0DJD1 1756 aa22.12■■□□□ 1.13
GCDH-211ENST00000590472 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
GCDH-211ENST00000590472 MARCH10Q8NA82 808 aaPredicted RBP22.11■■□□□ 1.13
GCDH-211ENST00000590472 LTV1Q96GA3 475 aaPredicted RBP22.11■■□□□ 1.13
GCDH-211ENST00000590472 TNS2Q63HR2 1409 aa22.11■■□□□ 1.13
GCDH-211ENST00000590472 ANKRD26Q9UPS8 1709 aa22.11■■□□□ 1.13
GCDH-211ENST00000590472 PANK3Q9H999 370 aa22.1■■□□□ 1.13
GCDH-211ENST00000590472 EXOC5O00471 708 aa22.09■■□□□ 1.13
GCDH-211ENST00000590472 IL2RBP14784 551 aa22.09■■□□□ 1.13
GCDH-211ENST00000590472 KIF7Q2M1P5 1343 aa22.07■■□□□ 1.12
GCDH-211ENST00000590472 BCL9O00512 1426 aa22.07■■□□□ 1.12
GCDH-211ENST00000590472 APBA3O96018 575 aa22.07■■□□□ 1.12
GCDH-211ENST00000590472 KIF24Q5T7B8 1368 aa22.07■■□□□ 1.12
GCDH-211ENST00000590472 CAMKK2Q96RR4 588 aa22.06■■□□□ 1.12
GCDH-211ENST00000590472 EMILIN1Q9Y6C2 1016 aa22.06■■□□□ 1.12
GCDH-211ENST00000590472 INSRP06213 1382 aa22.06■■□□□ 1.12
GCDH-211ENST00000590472 FLT4P35916 1363 aa22.06■■□□□ 1.12
GCDH-211ENST00000590472 EZH2Q15910 746 aaKnown RBP22.05■■□□□ 1.12
GCDH-211ENST00000590472 HSP90AB2PQ58FF8 381 aa22.05■■□□□ 1.12
GCDH-211ENST00000590472 MAP2P11137 1827 aaKnown RBP22.05■■□□□ 1.12
GCDH-211ENST00000590472 RREB1Q92766 1687 aa22.04■■□□□ 1.12
GCDH-211ENST00000590472 PTF1AQ7RTS3 328 aa22.03■■□□□ 1.12
GCDH-211ENST00000590472 NBPF6Q5VWK0 638 aa22.02■■□□□ 1.12
GCDH-211ENST00000590472 NBPF4Q96M43 638 aa22.02■■□□□ 1.12
GCDH-211ENST00000590472 SMG6Q86US8 1419 aaKnown RBP22.02■■□□□ 1.12
GCDH-211ENST00000590472 PARD3Q8TEW0 1356 aa22.01■■□□□ 1.11
GCDH-211ENST00000590472 NSD2O96028 1365 aa22■■□□□ 1.11
GCDH-211ENST00000590472 BCL11BQ9C0K0 894 aaPredicted RBP22■■□□□ 1.11
GCDH-211ENST00000590472 POLKQ9UBT6 870 aa22■■□□□ 1.11
GCDH-211ENST00000590472 MEGF6O75095 1541 aa22■■□□□ 1.11
GCDH-211ENST00000590472 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
GCDH-211ENST00000590472 RGPD3A6NKT7 1758 aaPredicted RBP21.99■■□□□ 1.11
GCDH-211ENST00000590472 RGPD4Q7Z3J3 1758 aa21.99■■□□□ 1.11
GCDH-211ENST00000590472 NUP188Q5SRE5 1749 aa21.99■■□□□ 1.11
GCDH-211ENST00000590472 NHSQ6T4R5 1651 aa21.98■■□□□ 1.11
GCDH-211ENST00000590472 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
GCDH-211ENST00000590472 USHBP1Q8N6Y0 703 aa21.98■■□□□ 1.11
GCDH-211ENST00000590472 WASHC2AQ641Q2 1341 aa21.98■■□□□ 1.11
GCDH-211ENST00000590472 TNNT2P45379 298 aaPredicted RBP21.97■■□□□ 1.11
GCDH-211ENST00000590472 KNSTRNQ9Y448 316 aa21.96■■□□□ 1.11
GCDH-211ENST00000590472 PLSCR1O15162 318 aa21.95■■□□□ 1.1
GCDH-211ENST00000590472 KCNQ2O43526 872 aa21.95■■□□□ 1.1
GCDH-211ENST00000590472 DDX54Q8TDD1 881 aaKnown RBP21.94■■□□□ 1.1
GCDH-211ENST00000590472 NCAPD2Q15021 1401 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms